Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq81 165 1e-34
seq69 113 6e-19
seq35 104 3e-16
seq126 102 1e-15
seq10357 96.9 4e-14
>seq81
Length=91273
Score = 165 bits (182), Expect = 1e-34
Identities = 271/388 (70%), Gaps = 17/388 (4%)
Strand=Plus/Minus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||| ||||| || || |||| ||| ||||| ||||||||||| |||| ||||||
Sbjct 56695 CTGGTCAACGTATCGTGCAGTGTTGTTGAAGACACGGAGCATGGGAACGATACCGTTGCT 56636
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
| || ||||| || || | ||||| ||| | | || | ||||| | | ||
Sbjct 56635 GACACCATTGGTACCGGCAATGTAGGAGCCAGTTCCTCGGATGTTGTGGATGTTGAGACC 56576
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
||| || || || | ||||||||| | ||||| ||||| ||||||||||| || ||
Sbjct 56575 GATACCACCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTC 56516
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
||||||||| |||||||| || || || ||||||||| || ||||| | || ||
Sbjct 56515 GATCGAGTCATCCTTCATGGTGACAAGGAAACACGACGAGAGCTGGGGGTGGGGAGTACC 56456
Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364
||||||||||| ||||| | || ||||| |||| | |||||||| | ||||||
Sbjct 56455 AGCGTTGAAGAGGGTGGGGGAAGCGTGTGTGAAGAACTTCTGCGACATGAGATTGTAGGT 56396
Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCG-GCAAACCCATAGTGGCCGATGGCGA 1630423
||| |||| || || |||| || || | | ||| | | ||||
Sbjct 56395 CTCGA----TGGCGCTTTCG-AT-GTCCTCGCCGTGGATACCAACA----------GCGA 56352
Query 1630424 CGCGCATGAGCATGTACTGGGGCCGCTC 1630451
| ||||||||||||| |||||| |||||
Sbjct 56351 CACGCATGAGCATGTGCTGGGGACGCTC 56324
Score = 114 bits (126), Expect = 2e-19
Identities = 278/427 (65%), Gaps = 12/427 (3%)
Strand=Plus/Minus
Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGG 1628221
||| || |||||| ||||| ||||||| || | | ||||| ||||||| |||||||
Sbjct 57134 ACTCGATGATCTCTGTGCAAAGGTTGGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGC 57075
Query 1628222 TGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCG 1628281
| | ||||| | |||||||||| || ||| |||| || |||||| |||| | |
Sbjct 57074 TCTTGCGGTTGGCAGCGTCCTTGTAAAGGATGAAGGGGTTACCAGTCTCGGTCTGGGACT 57015
Query 1628282 CGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGC---GCGCGGCCCTNNN 1628338
||| |||||| |||||| || | || | ||| || ||| | ||| ||||
Sbjct 57014 CGAGGATGGCGTACCAGAGCTTCTGAGC---CTTGACGGTGCGCTTGGAGCGACCCTCGG 56958
Query 1628339 NNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCG 1628398
||||| || |||||||||| || || |||||
Sbjct 56957 CCTCGTAGCGCTCGTAGAGACGCTCAAACTCCTCGCCGTAGCAGTCAGCGAGACCGGGAC 56898
Query 1628399 CCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGC---ATAAAGA 1628455
|||| || || | |||||||||||| |||| || | || | | || ||||
Sbjct 56897 ACTCGTTAGGGCACATGAGCGACCAGTC---ACCGTTCTGCTCGACCCTCTTCATGAAGA 56841
Query 1628456 GGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGT 1628515
| || ||| || ||||| ||||| || || || || ||||||||| |||||||
Sbjct 56840 GATCGGGAACCCAGAGGGCGTAGAAGAGCTCACGGGCACGTACCTCCTCCTTACCGTGGT 56781
Query 1628516 TCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAA 1628575
|||| |||||| || | |||| | || | |||||| ||||| | |||| |||||
Sbjct 56780 TCTTGCGGAGGTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCAATGTAGATGGCAA 56721
Query 1628576 AGGCGCC 1628582
|||| ||
Sbjct 56720 AGGCACC 56714
Score = 86.0 bits (94), Expect = 8e-11
Identities = 122/172 (71%), Gaps = 0/172 (0%)
Strand=Plus/Minus
Query 1627787 CGTGGTAGACCGTCTCAAAGATGGCCCGGTTGAGGCGCCGCGCGCCGGCGCTCTCCCACG 1627846
||||||||| ||||| ||||| ||||||||| || || ||| ||| | |
Sbjct 57446 CGTGGTAGATGGTCTCGAAGATCTGAACGTTGAGGCGGCGGGCCTCGGGCGACTCAAAAG 57387
Query 1627847 GCAGGTCCATCATGGCAAACACGTCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGT 1627906
| |||| || || |||| || || ||||| || |||| || || || ||||
Sbjct 57386 CGTAGCCCATGATCATGAAGGCGTCAGCAAGACCCTGAACACCGATACCGATGGGTCGGT 57327
Query 1627907 GGCGCAGGTTCGAGTGGCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGAT 1627958
|||||| ||| || | ||| |||||||| || ||||||| ||||||||||||
Sbjct 57326 GGCGCATGTTGGACTTGCGAGCCTCGGGGACAGGGTAGTAGTTGATGTCGAT 57275
>seq69
Length=107628
Score = 113 bits (124), Expect = 6e-19
Identities = 188/267 (70%), Gaps = 11/267 (4%)
Strand=Plus/Minus
Query 869201 TCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAG 869260
|||||| || | ||| ||||||||||| || |||||||||||||| ||||||| |
Sbjct 12578 TCGTTGGAGAAAGTGAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCG 12519
Query 869261 AAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAG 869320
|| || ||||| ||||| || ||||||||||| || ||| ||| || ||||||||
Sbjct 12518 AACGAACCGGAGAAGAAGATACCTTCGACGGCGGCGAAAGCGACGAGACGTTCGGCAAAA 12459
Query 869321 GTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGAC 869380
||| || | | ||| |||||| | |||||||||| |||||| || ||||
Sbjct 12458 GTGGCGCGACGGTCC---GAGATCCAACGAAGAGCCCAGTCGG-CTTTTTGCTTGACGAC 12403
Query 869381 -GGCACCGTGTCGATGGCGCGAAAGAGG---TGGTCCTTTTCGGCCGGGTCCTTGACATA 869436
|| | || |||| |||| |||||| | | || ||| || || || ||
Sbjct 12402 GGGGATGGTCTCGACGGCGTCGAAGAGGAACTCGCGCTGCTCG---GGTTCGCGGATGTA 12346
Query 869437 GGTGTCGATCAGGAGCGAATAGGTCTC 869463
||||||||| ||||| || ||||| ||
Sbjct 12345 GGTGTCGATGAGGAGGGAGTAGGTTTC 12319
Score = 109 bits (120), Expect = 7e-18
Identities = 175/251 (70%), Gaps = 3/251 (1%)
Strand=Plus/Minus
Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692
|||||||||||||| || ||||||||| ||||| ||| | | || || |||||
Sbjct 12317 GAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCTTCGGCGGCTTGG 12258
Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752
|| || ||| || || | || |||||| ||||| |||||| ||||||||
Sbjct 12257 ACTTCAGAGGAGAATCGCTCGACGAGATTCTCGTTAACGATACCGTCGGAAGCGGCGAAG 12198
Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGTGG 869809
|| || |||||||| ||| ||||| ||||||| |||| ||||| |||| | |
Sbjct 12197 AAGGCAAGGACGTGAGAGATGAAGTGACGCTCGTTGTCGTTGAGCTTGTTGTCCCAATCG 12138
Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869
|| | ||||| | ||| ||||||||||||| ||||| |||||||| |||
Sbjct 12137 TGAAGATCCTTGGAAAGGTCGATCTCTTCGGCGGTCCAGAAGGAGGCTTCGGCCTTCTTG 12078
Query 869870 TACATCTCCCA 869880
||||| | |||
Sbjct 12077 TACATTTGCCA 12067
Score = 100 bits (110), Expect = 3e-15
Identities = 153/213 (72%), Gaps = 14/213 (7%)
Strand=Plus/Minus
Query 868798 TCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGC 868857
||||||| || ||||| |||||||| || |||| ||||| ||||||||| |||
Sbjct 12807 TCCGAGCTGCGTGAGCAATCGGTCGGCCACGTACTCAATGTAGGTGCACATGAGCTTGGC 12748
Query 868858 GTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAA-CTCTTTCTCGATCTCGA 868916
||||||||| ||||||| || |||| | ||| ||| || ||||| ||||||||| |
Sbjct 12747 GTTCATGCCAATGAGCGAAACGGGCAATGCATCGGTCAAGAAGCTCTT-CTCGATCTCTA 12689
Query 868917 CGGCCTCGACGATGATCTGCCTGGGCACG---TCG---GCCGAGGGCTTGTTGACGAGCA 868970
| |||||| || |||| || | ||| ||| || | | |||| || |||
Sbjct 12688 CAGCCTCGGAAATAATCT---TGAGAACGGTCTCGGGAGCAGCGCGCTTCTT---GAGAT 12635
Query 868971 TCGTGTAGAGCAGGCAGGCAAAGTCGCAGTGCA 869003
|| | |||||| ||||||||||||| |||||
Sbjct 12634 GCGAGAAGAGCAAGCAGGCAAAGTCGGTGTGCA 12602
>seq35
Length=190639
Score = 104 bits (114), Expect = 3e-16
Identities = 153/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| || || ||| | | ||| ||||| || |||||||||||||| |||| ||
Sbjct 123583 GCTTGGAAAGCTCACCGGGGAGGATGAGGCGGACAGCGGTCTGGATCTCTCGCGACGAGA 123642
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| |||||| | || || | ||||| ||| ||||||| |||| |
Sbjct 123643 TGGTGGACTTCTTGTTGTACGAAGCGAGCTTGGAAGCCTCAGTGGCGATGCGCTCGAAGA 123702
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||| | ||| |||||||||| || | ||| | |||||| ||||| || ||||||||
Sbjct 123703 TGTCCTGGACGAACGAGTTCAAGATAGCCATGGCCTTGTTCGAGATACCAGTGTCGGGGT 123762
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
| |||||||| || || ||||||| | | |||||
Sbjct 123763 GAACCTGCTTAAGGACACGGTAGATGTAGGTGGAGTA 123799
>seq126
Length=42303
Score = 102 bits (112), Expect = 1e-15
Identities = 258/390 (66%), Gaps = 2/390 (1%)
Strand=Plus/Minus
Query 1573776 CTCCCGTGGATCGAAAAGTATCGCCCTATGGTGCTCGACGACATTGTCGGCAACGAGCAC 1573835
||||| ||| |||||||||| |||||| | || |||||| | || |||||| | ||
Sbjct 22944 CTCCCCTGGGTCGAAAAGTACCGCCCTCTCCGCCTAGACGACGTCGTTGGCAACAAAGAC 22885
Query 1573836 GCCGTCGCCTATCTCAGAGCGCTGGCTGCCGACGGCGACATGCCCA-ACCTCTTGCTGGC 1573894
|| ||| | ||||| || | |||| ||| || ||||| ||||| | | |
Sbjct 22884 ACCATCGACCGTCTCAAAGTCATTCAATCCGATGGCAAC-TGCCCGCACCTCCTCATCTC 22826
Query 1573895 GGGTCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCTCTTGGG 1573954
|| | ||||| | ||||| ||||| | || ||||| || |||| ||| | ||
Sbjct 22825 CGGCCTCCCCGGTATTGGCAAAACCACCTCCGTCCTCTGTCTCGCACGTGCCCTTCTTGG 22766
Query 1573955 CGCGGCCGCCGACGAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGT 1574014
|| || | | || | || || ||||||||||| |||||||| || || || |||||
Sbjct 22765 CGACGCATACAAAGAAGGAGTCCTTGAACTCAACGCATCGGACGAACGAGGAGTTGACGT 22706
Query 1574015 CGTGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCGGACGCCA 1574074
|| || || | |||||| ||| |||| || |||| || || | ||
Sbjct 22705 TGTACGTAACAAGATCAAGACTTTTGCCCAGAAGAAAGTCTCTTTGCCTCCTGGTAGGCA 22646
Query 1574075 CAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCG 1574134
||| | ||||||||||| ||||| || | | || | || |||||||| || ||||
Sbjct 22645 TAAGATTATCATCCTCGATGAGGCGGATAGTATGACTCCCGCCGCCCAGCAAGCGTTGCG 22586
Query 1574135 GTCCACCATGGAAAAGCACACCAACACGAC 1574164
|| ||||| | || ||||||| ||
Sbjct 22585 ACGTACGATGGAGATCTACTCCAACACAAC 22556
>seq10357
Length=219
Score = 96.9 bits (106), Expect = 4e-14
Identities = 145/204 (71%), Gaps = 8/204 (4%)
Strand=Plus/Minus
Query 1573932 TGTCTGGCGCGTGTCCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTCAACGCG 1573991
||||| || |||| || |||||| || | | |||| |||||||||||||||||
Sbjct 208 TGTCTTGCTCGTGCGCTGCTGGGCGAAGCATACAAAGAGGGTGTGCTCGAACTCAACGCT 149
Query 1573992 TCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCCA-AGAG 1574050
|| ||||| || || ||||| || || || || | |||||| ||| | || |||
Sbjct 148 TCCGACGAACGAGGTGTCGATGTGGTTCGAAACAAGATCAAG----ACGTTTGCACAGAA 93
Query 1574051 GA---TCGACCTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCT 1574107
|| || || ||||| || | |||||| | |||||| | |||||||||||| || |
Sbjct 92 GAAAGTCTCGCTTCCGCCGGGCAGGCACAAGATCATCATCTTGGACGAGGCCGACAGCAT 33
Query 1574108 CACGTCGGCGGCCCAGCAGGCCCT 1574131
|| |||| || |||||||| ||
Sbjct 32 GACACCGGCTGCACAGCAGGCACT 9
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106085489470280
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