Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq81 165 1e-34 seq69 113 6e-19 seq35 104 3e-16 seq126 102 1e-15 seq10357 96.9 4e-14 >seq81 Length=91273 Score = 165 bits (182), Expect = 1e-34 Identities = 271/388 (70%), Gaps = 17/388 (4%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| ||||| || || |||| ||| ||||| ||||||||||| |||| |||||| Sbjct 56695 CTGGTCAACGTATCGTGCAGTGTTGTTGAAGACACGGAGCATGGGAACGATACCGTTGCT 56636 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 | || ||||| || || | ||||| ||| | | || | ||||| | | || Sbjct 56635 GACACCATTGGTACCGGCAATGTAGGAGCCAGTTCCTCGGATGTTGTGGATGTTGAGACC 56576 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| || || || | ||||||||| | ||||| ||||| ||||||||||| || || Sbjct 56575 GATACCACCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTC 56516 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 ||||||||| |||||||| || || || ||||||||| || ||||| | || || Sbjct 56515 GATCGAGTCATCCTTCATGGTGACAAGGAAACACGACGAGAGCTGGGGGTGGGGAGTACC 56456 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 ||||||||||| ||||| | || ||||| |||| | |||||||| | |||||| Sbjct 56455 AGCGTTGAAGAGGGTGGGGGAAGCGTGTGTGAAGAACTTCTGCGACATGAGATTGTAGGT 56396 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCG-GCAAACCCATAGTGGCCGATGGCGA 1630423 ||| |||| || || |||| || || | | ||| | | |||| Sbjct 56395 CTCGA----TGGCGCTTTCG-AT-GTCCTCGCCGTGGATACCAACA----------GCGA 56352 Query 1630424 CGCGCATGAGCATGTACTGGGGCCGCTC 1630451 | ||||||||||||| |||||| ||||| Sbjct 56351 CACGCATGAGCATGTGCTGGGGACGCTC 56324 Score = 114 bits (126), Expect = 2e-19 Identities = 278/427 (65%), Gaps = 12/427 (3%) Strand=Plus/Minus Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGG 1628221 ||| || |||||| ||||| ||||||| || | | ||||| ||||||| ||||||| Sbjct 57134 ACTCGATGATCTCTGTGCAAAGGTTGGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGC 57075 Query 1628222 TGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCG 1628281 | | ||||| | |||||||||| || ||| |||| || |||||| |||| | | Sbjct 57074 TCTTGCGGTTGGCAGCGTCCTTGTAAAGGATGAAGGGGTTACCAGTCTCGGTCTGGGACT 57015 Query 1628282 CGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGC---GCGCGGCCCTNNN 1628338 ||| |||||| |||||| || | || | ||| || ||| | ||| |||| Sbjct 57014 CGAGGATGGCGTACCAGAGCTTCTGAGC---CTTGACGGTGCGCTTGGAGCGACCCTCGG 56958 Query 1628339 NNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCG 1628398 ||||| || |||||||||| || || ||||| Sbjct 56957 CCTCGTAGCGCTCGTAGAGACGCTCAAACTCCTCGCCGTAGCAGTCAGCGAGACCGGGAC 56898 Query 1628399 CCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGC---ATAAAGA 1628455 |||| || || | |||||||||||| |||| || | || | | || |||| Sbjct 56897 ACTCGTTAGGGCACATGAGCGACCAGTC---ACCGTTCTGCTCGACCCTCTTCATGAAGA 56841 Query 1628456 GGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGT 1628515 | || ||| || ||||| ||||| || || || || ||||||||| ||||||| Sbjct 56840 GATCGGGAACCCAGAGGGCGTAGAAGAGCTCACGGGCACGTACCTCCTCCTTACCGTGGT 56781 Query 1628516 TCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAA 1628575 |||| |||||| || | |||| | || | |||||| ||||| | |||| ||||| Sbjct 56780 TCTTGCGGAGGTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCAATGTAGATGGCAA 56721 Query 1628576 AGGCGCC 1628582 |||| || Sbjct 56720 AGGCACC 56714 Score = 86.0 bits (94), Expect = 8e-11 Identities = 122/172 (71%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 1627787 CGTGGTAGACCGTCTCAAAGATGGCCCGGTTGAGGCGCCGCGCGCCGGCGCTCTCCCACG 1627846 ||||||||| ||||| ||||| ||||||||| || || ||| ||| | | Sbjct 57446 CGTGGTAGATGGTCTCGAAGATCTGAACGTTGAGGCGGCGGGCCTCGGGCGACTCAAAAG 57387 Query 1627847 GCAGGTCCATCATGGCAAACACGTCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGT 1627906 | |||| || || |||| || || ||||| || |||| || || || |||| Sbjct 57386 CGTAGCCCATGATCATGAAGGCGTCAGCAAGACCCTGAACACCGATACCGATGGGTCGGT 57327 Query 1627907 GGCGCAGGTTCGAGTGGCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGAT 1627958 |||||| ||| || | ||| |||||||| || ||||||| |||||||||||| Sbjct 57326 GGCGCATGTTGGACTTGCGAGCCTCGGGGACAGGGTAGTAGTTGATGTCGAT 57275 >seq69 Length=107628 Score = 113 bits (124), Expect = 6e-19 Identities = 188/267 (70%), Gaps = 11/267 (4%) Strand=Plus/Minus Query 869201 TCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAG 869260 |||||| || | ||| ||||||||||| || |||||||||||||| ||||||| | Sbjct 12578 TCGTTGGAGAAAGTGAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCG 12519 Query 869261 AAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAG 869320 || || ||||| ||||| || ||||||||||| || ||| ||| || |||||||| Sbjct 12518 AACGAACCGGAGAAGAAGATACCTTCGACGGCGGCGAAAGCGACGAGACGTTCGGCAAAA 12459 Query 869321 GTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGAC 869380 ||| || | | ||| |||||| | |||||||||| |||||| || |||| Sbjct 12458 GTGGCGCGACGGTCC---GAGATCCAACGAAGAGCCCAGTCGG-CTTTTTGCTTGACGAC 12403 Query 869381 -GGCACCGTGTCGATGGCGCGAAAGAGG---TGGTCCTTTTCGGCCGGGTCCTTGACATA 869436 || | || |||| |||| |||||| | | || ||| || || || || Sbjct 12402 GGGGATGGTCTCGACGGCGTCGAAGAGGAACTCGCGCTGCTCG---GGTTCGCGGATGTA 12346 Query 869437 GGTGTCGATCAGGAGCGAATAGGTCTC 869463 ||||||||| ||||| || ||||| || Sbjct 12345 GGTGTCGATGAGGAGGGAGTAGGTTTC 12319 Score = 109 bits (120), Expect = 7e-18 Identities = 175/251 (70%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||| ||||| ||| | | || || ||||| Sbjct 12317 GAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCTTCGGCGGCTTGG 12258 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || ||| || || | || |||||| ||||| |||||| |||||||| Sbjct 12257 ACTTCAGAGGAGAATCGCTCGACGAGATTCTCGTTAACGATACCGTCGGAAGCGGCGAAG 12198 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGTGG 869809 || || |||||||| ||| ||||| ||||||| |||| ||||| |||| | | Sbjct 12197 AAGGCAAGGACGTGAGAGATGAAGTGACGCTCGTTGTCGTTGAGCTTGTTGTCCCAATCG 12138 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 || | ||||| | ||| ||||||||||||| ||||| |||||||| ||| Sbjct 12137 TGAAGATCCTTGGAAAGGTCGATCTCTTCGGCGGTCCAGAAGGAGGCTTCGGCCTTCTTG 12078 Query 869870 TACATCTCCCA 869880 ||||| | ||| Sbjct 12077 TACATTTGCCA 12067 Score = 100 bits (110), Expect = 3e-15 Identities = 153/213 (72%), Gaps = 14/213 (7%) Strand=Plus/Minus Query 868798 TCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGC 868857 ||||||| || ||||| |||||||| || |||| ||||| ||||||||| ||| Sbjct 12807 TCCGAGCTGCGTGAGCAATCGGTCGGCCACGTACTCAATGTAGGTGCACATGAGCTTGGC 12748 Query 868858 GTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAA-CTCTTTCTCGATCTCGA 868916 ||||||||| ||||||| || |||| | ||| ||| || ||||| ||||||||| | Sbjct 12747 GTTCATGCCAATGAGCGAAACGGGCAATGCATCGGTCAAGAAGCTCTT-CTCGATCTCTA 12689 Query 868917 CGGCCTCGACGATGATCTGCCTGGGCACG---TCG---GCCGAGGGCTTGTTGACGAGCA 868970 | |||||| || |||| || | ||| ||| || | | |||| || ||| Sbjct 12688 CAGCCTCGGAAATAATCT---TGAGAACGGTCTCGGGAGCAGCGCGCTTCTT---GAGAT 12635 Query 868971 TCGTGTAGAGCAGGCAGGCAAAGTCGCAGTGCA 869003 || | |||||| ||||||||||||| ||||| Sbjct 12634 GCGAGAAGAGCAAGCAGGCAAAGTCGGTGTGCA 12602 >seq35 Length=190639 Score = 104 bits (114), Expect = 3e-16 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| || || ||| | | ||| ||||| || |||||||||||||| |||| || Sbjct 123583 GCTTGGAAAGCTCACCGGGGAGGATGAGGCGGACAGCGGTCTGGATCTCTCGCGACGAGA 123642 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| | || || | ||||| ||| ||||||| |||| | Sbjct 123643 TGGTGGACTTCTTGTTGTACGAAGCGAGCTTGGAAGCCTCAGTGGCGATGCGCTCGAAGA 123702 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| | ||| |||||||||| || | ||| | |||||| ||||| || |||||||| Sbjct 123703 TGTCCTGGACGAACGAGTTCAAGATAGCCATGGCCTTGTTCGAGATACCAGTGTCGGGGT 123762 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | |||||||| || || ||||||| | | ||||| Sbjct 123763 GAACCTGCTTAAGGACACGGTAGATGTAGGTGGAGTA 123799 >seq126 Length=42303 Score = 102 bits (112), Expect = 1e-15 Identities = 258/390 (66%), Gaps = 2/390 (1%) Strand=Plus/Minus Query 1573776 CTCCCGTGGATCGAAAAGTATCGCCCTATGGTGCTCGACGACATTGTCGGCAACGAGCAC 1573835 ||||| ||| |||||||||| |||||| | || |||||| | || |||||| | || Sbjct 22944 CTCCCCTGGGTCGAAAAGTACCGCCCTCTCCGCCTAGACGACGTCGTTGGCAACAAAGAC 22885 Query 1573836 GCCGTCGCCTATCTCAGAGCGCTGGCTGCCGACGGCGACATGCCCA-ACCTCTTGCTGGC 1573894 || ||| | ||||| || | |||| ||| || ||||| ||||| | | | Sbjct 22884 ACCATCGACCGTCTCAAAGTCATTCAATCCGATGGCAAC-TGCCCGCACCTCCTCATCTC 22826 Query 1573895 GGGTCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCTCTTGGG 1573954 || | ||||| | ||||| ||||| | || ||||| || |||| ||| | || Sbjct 22825 CGGCCTCCCCGGTATTGGCAAAACCACCTCCGTCCTCTGTCTCGCACGTGCCCTTCTTGG 22766 Query 1573955 CGCGGCCGCCGACGAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGT 1574014 || || | | || | || || ||||||||||| |||||||| || || || ||||| Sbjct 22765 CGACGCATACAAAGAAGGAGTCCTTGAACTCAACGCATCGGACGAACGAGGAGTTGACGT 22706 Query 1574015 CGTGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCGGACGCCA 1574074 || || || | |||||| ||| |||| || |||| || || | || Sbjct 22705 TGTACGTAACAAGATCAAGACTTTTGCCCAGAAGAAAGTCTCTTTGCCTCCTGGTAGGCA 22646 Query 1574075 CAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCG 1574134 ||| | ||||||||||| ||||| || | | || | || |||||||| || |||| Sbjct 22645 TAAGATTATCATCCTCGATGAGGCGGATAGTATGACTCCCGCCGCCCAGCAAGCGTTGCG 22586 Query 1574135 GTCCACCATGGAAAAGCACACCAACACGAC 1574164 || ||||| | || ||||||| || Sbjct 22585 ACGTACGATGGAGATCTACTCCAACACAAC 22556 >seq10357 Length=219 Score = 96.9 bits (106), Expect = 4e-14 Identities = 145/204 (71%), Gaps = 8/204 (4%) Strand=Plus/Minus Query 1573932 TGTCTGGCGCGTGTCCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTCAACGCG 1573991 ||||| || |||| || |||||| || | | |||| ||||||||||||||||| Sbjct 208 TGTCTTGCTCGTGCGCTGCTGGGCGAAGCATACAAAGAGGGTGTGCTCGAACTCAACGCT 149 Query 1573992 TCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCCA-AGAG 1574050 || ||||| || || ||||| || || || || | |||||| ||| | || ||| Sbjct 148 TCCGACGAACGAGGTGTCGATGTGGTTCGAAACAAGATCAAG----ACGTTTGCACAGAA 93 Query 1574051 GA---TCGACCTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCT 1574107 || || || ||||| || | |||||| | |||||| | |||||||||||| || | Sbjct 92 GAAAGTCTCGCTTCCGCCGGGCAGGCACAAGATCATCATCTTGGACGAGGCCGACAGCAT 33 Query 1574108 CACGTCGGCGGCCCAGCAGGCCCT 1574131 || |||| || |||||||| || Sbjct 32 GACACCGGCTGCACAGCAGGCACT 9 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106085489470280