Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq144 111 1e-19
seq62 107 2e-18
seq33 102 7e-17
>seq144
Length=29207
Score = 111 bits (122), Expect = 1e-19
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || |||||||| || || || ||||| || || | ||
Sbjct 7957 ATGCAGATCTTTGTCAAGACTCTGACCGGTAAGACCATCACCCTCGAGGTGGAGTCTTCC 8016
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| || | ||| || || ||||| || || || |||||||| ||
Sbjct 8017 GACACCATTGACAACGTCAAGGCCAAA-ATTCAGGACAAGGAGGGTATCCCTCCCGACCA 8075
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| | ||||| || || |||||| |||| ||| ||| | | || || || ||
Sbjct 8076 GCAGCGTCTCATCTTCGCTGGTAAACAGTTGGAAGATGGCCGAACCCTCTCGGACTACAA 8135
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||| || ||||| || || | ||||||||
Sbjct 8136 CATCCAGAAGGAGTCCACCTTGCACTTGGT 8165
Score = 105 bits (116), Expect = 6e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | ||||| || || ||||| ||||| || || | |
Sbjct 8185 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATTACTCTCGAGGTTGAGTCGTCT 8244
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| ||||| || |||||||||||
Sbjct 8245 GACACTATCGATAACGTCAAGGCCAAGATTCAGGACAAGGAAGGCATTCCTCCCGATCAG 8304
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | || || ||||| || ||||| ||||| | | | |||| ||||| |||
Sbjct 8305 CAGCGTCTCATTTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACCTTGTCCGATTACAAC 8364
Query 24884 ATTCAAAAGGAATCGACACTACA 24906
|| || || |||||||| || ||
Sbjct 8365 ATCCAGAAAGAATCGACCCTCCA 8387
Score = 96.9 bits (106), Expect = 3e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | ||||| || || || || || ||||| ||||| || || | |
Sbjct 8413 ATGCAGATCTTCGTCAAAACCCTTACAGGCAAGACCATTACTCTCGAGGTCGAGTCTTCT 8472
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | ||||| |||||||| ||||| ||||| || || || |||||
Sbjct 8473 GATACCATCGACAACGTAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCACCTGATCAG 8532
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||||| | |||||||| || || || || ||||| ||| | || || || |||
Sbjct 8533 CAACGCCTCATCTTTGCTGGAAAGCAACTTGAGGACGGCCGAACACTCTCCGACTACAAC 8592
Query 24884 ATTCAAAAGGA 24894
|||||||||||
Sbjct 8593 ATTCAAAAGGA 8603
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || || || || || || || || | ||||| || || |
Sbjct 8641 ATGCAAATCTTTGTCAAGACACTCACAGGAAAGACCATCACATTGGAAGTCGAGTCCTCG 8700
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| || || || || || || ||
Sbjct 8701 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCTGACCAG 8760
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | |||||||| || || ||| |||| ||| | | | | || || || |||
Sbjct 8761 CAGCGTCTTATCTTTGCAGGTAAGCAGTTGGAAGATGGTCGCACCCTTTCGGACTACAAC 8820
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || ||| | ||| | || |||||||||||
Sbjct 8821 ATCCAGAAGGAGAGCACTCTTCACCTTGTGCTTCGTTTGCGCGGAGG 8867
>seq62
Length=118391
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || | || || || || || || || ||||| || | |
Sbjct 71410 ATGCAGATCTTTGTCAAGACTTTGACTGGCAAGACCATCACTCTTGAAGTCGAGTCTTCG 71351
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| ||||| || |||||||||||
Sbjct 71350 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGATCAG 71291
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || | ||||| ||||| || ||||| || || | | | |||||||| |||
Sbjct 71290 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGCACTCTTTCAGATTACAAC 71231
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || |||||||| ||||| || |||||
Sbjct 71230 ATCCAGAAGGAATCCACACTTCATTTGGT 71202
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || || ||||| || || || || ||||| || || || |
Sbjct 71639 GATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTC 71580
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || ||||| || || || || || || || || || ||
Sbjct 71579 GGACACCATTGACAACGTCAAGGCCAAGATTCAGGATAAGGAGGGTATCCCACCTGACCA 71520
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| | |||||||| || || ||||| |||||| | | | | || || || ||
Sbjct 71519 GCAGCGTCTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTCTCGGACTACAA 71460
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || ||||| || || || ||| | || | || | ||||| ||
Sbjct 71459 CATCCAGAAGGAGTCCACTCTTCACCTCGTCCTCCGTCTCCGCGGTGG 71412
>seq33
Length=194022
Score = 102 bits (112), Expect = 7e-17
Identities = 149/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| |||| || || || || || || || || || || || || | |
Sbjct 184114 GATGCAGATCTTTGTTAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTGGAGTCTTC 184173
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| ||||| ||||| || || || |||||
Sbjct 184174 GGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCA 184233
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| | ||||| ||||| || ||||| || ||| | | | | || || || ||
Sbjct 184234 GCAGCGTCTCATCTTCGCCGGTAAGCAGCTCGAAGATGGACGCACCCTTTCGGACTACAA 184293
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913
||| || ||||| ||||| || ||| | |||
Sbjct 184294 CATCCAGAAGGAGTCGACCCTTCACCTCGTG 184324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449825391435200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |