Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq144 111 1e-19 seq62 107 2e-18 seq33 102 7e-17 >seq144 Length=29207 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || |||||||| || || || ||||| || || | || Sbjct 7957 ATGCAGATCTTTGTCAAGACTCTGACCGGTAAGACCATCACCCTCGAGGTGGAGTCTTCC 8016 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || | ||| || || ||||| || || || |||||||| || Sbjct 8017 GACACCATTGACAACGTCAAGGCCAAA-ATTCAGGACAAGGAGGGTATCCCTCCCGACCA 8075 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| | ||||| || || |||||| |||| ||| ||| | | || || || || Sbjct 8076 GCAGCGTCTCATCTTCGCTGGTAAACAGTTGGAAGATGGCCGAACCCTCTCGGACTACAA 8135 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| || ||||| || || | |||||||| Sbjct 8136 CATCCAGAAGGAGTCCACCTTGCACTTGGT 8165 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | ||||| || || ||||| ||||| || || | | Sbjct 8185 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATTACTCTCGAGGTTGAGTCGTCT 8244 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| ||||| || ||||||||||| Sbjct 8245 GACACTATCGATAACGTCAAGGCCAAGATTCAGGACAAGGAAGGCATTCCTCCCGATCAG 8304 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | || || ||||| || ||||| ||||| | | | |||| ||||| ||| Sbjct 8305 CAGCGTCTCATTTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACCTTGTCCGATTACAAC 8364 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 || || || |||||||| || || Sbjct 8365 ATCCAGAAAGAATCGACCCTCCA 8387 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| || || || || || ||||| ||||| || || | | Sbjct 8413 ATGCAGATCTTCGTCAAAACCCTTACAGGCAAGACCATTACTCTCGAGGTCGAGTCTTCT 8472 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | ||||| |||||||| ||||| ||||| || || || ||||| Sbjct 8473 GATACCATCGACAACGTAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCACCTGATCAG 8532 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| | |||||||| || || || || ||||| ||| | || || || ||| Sbjct 8533 CAACGCCTCATCTTTGCTGGAAAGCAACTTGAGGACGGCCGAACACTCTCCGACTACAAC 8592 Query 24884 ATTCAAAAGGA 24894 ||||||||||| Sbjct 8593 ATTCAAAAGGA 8603 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || || || || || || || || | ||||| || || | Sbjct 8641 ATGCAAATCTTTGTCAAGACACTCACAGGAAAGACCATCACATTGGAAGTCGAGTCCTCG 8700 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || || || || Sbjct 8701 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCTGACCAG 8760 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | |||||||| || || ||| |||| ||| | | | | || || || ||| Sbjct 8761 CAGCGTCTTATCTTTGCAGGTAAGCAGTTGGAAGATGGTCGCACCCTTTCGGACTACAAC 8820 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || ||| | ||| | || ||||||||||| Sbjct 8821 ATCCAGAAGGAGAGCACTCTTCACCTTGTGCTTCGTTTGCGCGGAGG 8867 >seq62 Length=118391 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | || || || || || || || ||||| || | | Sbjct 71410 ATGCAGATCTTTGTCAAGACTTTGACTGGCAAGACCATCACTCTTGAAGTCGAGTCTTCG 71351 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| || ||||||||||| Sbjct 71350 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGATCAG 71291 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| ||||| || ||||| || || | | | |||||||| ||| Sbjct 71290 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGCACTCTTTCAGATTACAAC 71231 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || |||||||| ||||| || ||||| Sbjct 71230 ATCCAGAAGGAATCCACACTTCATTTGGT 71202 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || ||||| || || || || ||||| || || || | Sbjct 71639 GATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTC 71580 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||| || || || || || || || || || || Sbjct 71579 GGACACCATTGACAACGTCAAGGCCAAGATTCAGGATAAGGAGGGTATCCCACCTGACCA 71520 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| | |||||||| || || ||||| |||||| | | | | || || || || Sbjct 71519 GCAGCGTCTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTCTCGGACTACAA 71460 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| || || || ||| | || | || | ||||| || Sbjct 71459 CATCCAGAAGGAGTCCACTCTTCACCTCGTCCTCCGTCTCCGCGGTGG 71412 >seq33 Length=194022 Score = 102 bits (112), Expect = 7e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| |||| || || || || || || || || || || || || | | Sbjct 184114 GATGCAGATCTTTGTTAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTGGAGTCTTC 184173 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| ||||| ||||| || || || ||||| Sbjct 184174 GGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCA 184233 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| | ||||| ||||| || ||||| || ||| | | | | || || || || Sbjct 184234 GCAGCGTCTCATCTTCGCCGGTAAGCAGCTCGAAGATGGACGCACCCTTTCGGACTACAA 184293 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||| || ||||| ||||| || ||| | ||| Sbjct 184294 CATCCAGAAGGAGTCGACCCTTCACCTCGTG 184324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449825391435200