Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq11 120 3e-22
seq144 84.2 2e-11
>seq11
Length=300877
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 34394 CGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCG 34453
||| ||| || | |||||||||||| |||| ||||| || | |||| | || || |
Sbjct 129102 CGGCGTCATGAGCACCGTTGACGATGTATCGGTCGTTCTTCTCGTCGAACGAGGTCTGAG 129161
Query 34454 CGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGG 34513
| || ||||| || |||||| |||| ||||||||| | | ||||| | |||| |
Sbjct 129162 CACCAAGCTCACATCCGAAGAACTTGGTCGGGTAAGTAGGAGGACGGCTGAGCGAGCGAG 129221
Query 34514 CGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGG 34573
| || |||| ||||||| ||||| |||||||| ||||| ||||| || |||| |||||
Sbjct 129222 CAATGTCGGACATGTTGGGAATGACGGTCTTGATACCGTTACCCTTACCCTCGATCTTGG 129281
Query 34574 CGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCG 34622
| | ||||||| ||| ||||| ||| ||| | |||| |||
Sbjct 129282 TCTGAAGGAGCGGCATGCGGTATCGGTAAAACTTGTCGTCGACATCGCG 129330
>seq144
Length=29207
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || |||||||| | || ||||| |||||||| |||| ||| ||
Sbjct 8413 ATGCAGATCTTCGTCAAAACCCTTACAGGCAAGACCATTACTCTCGAGGTCGAGTCTTCT 8472
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| ||| | | ||||| ||||| ||||| |||||| | || |||||
Sbjct 8473 GATACCATCGACAACGTAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCACCTGATCAG 8532
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||| | || || | ||| || || || || ||||| | | ||||| | | || ||||||
Sbjct 8533 CAACGCCTCATCTTTGCTGGAAAGCAACTTGAGGACGGCCGAACACTCTCCGACTACAAC 8592
Query 110453 ATTCAAAAAGA 110463
|||||||| ||
Sbjct 8593 ATTCAAAAGGA 8603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412776995450120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |