Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq69 161 2e-33 seq35 138 2e-26 seq81 123 4e-22 seq126 100 5e-15 >seq69 Length=107628 Score = 161 bits (178), Expect = 2e-33 Identities = 214/295 (73%), Gaps = 9/295 (3%) Strand=Plus/Minus Query 794376 GAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAA 794435 ||| ||||||||||| || |||||||||||||| ||||||| | ||| || ||||| Sbjct 12564 GAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAACGAACCGGAGAA 12505 Query 794436 AAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTC 794495 ||||| || ||||||||||| || ||||||| || |||||||||||| | | | || Sbjct 12504 GAAGATACCTTCGACGGCGGCGAAAGCGACGAGACGTTCGGCAAAAGTGGCGCGACGGTC 12445 Query 794496 TTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGAT 794555 |||||| | ||||| || || |||| | | || ||| | || |||| Sbjct 12444 ---CGAGATCCAACGAAGAGCCCAGTCGGCTTTTTGCTTGACGACGGGGATGGTCTCGAC 12388 Query 794556 GGCGCGAAAGAGG---TGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAG 794612 |||| |||||| | | || |||| || || || |||||||||||||||||| Sbjct 12387 GGCGTCGAAGAGGAACTCGCGCTGCTCG---GGTTCGCGGATGTAGGTGTCGATGAGGAG 12331 Query 794613 CGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 |||||||| || ||||||||||| || || ||||||||| || || |||||| Sbjct 12330 GGAGTAGGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAG 12276 Score = 87.8 bits (96), Expect = 3e-11 Identities = 97/127 (76%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 794007 CCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCG 794066 |||||| || |||| |||||||| ||| | |||||||| ||||||||| |||| Sbjct 12806 CCGAGCTGCGTGAGCAATCGGTCGGCCACGTACTCAATGTAGGTGCACATGAGCTTGGCG 12747 Query 794067 TTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAA-CTCTTTCTCGATCTCGAC 794125 |||||||| ||||||| ||||||| | ||| | | || ||||| ||||||||| || Sbjct 12746 TTCATGCCAATGAGCGAAACGGGCAATGCATCGGTCAAGAAGCTCTT-CTCGATCTCTAC 12688 Query 794126 GGCCTCG 794132 |||||| Sbjct 12687 AGCCTCG 12681 >seq35 Length=190639 Score = 138 bits (152), Expect = 2e-26 Identities = 172/233 (74%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 |||||||||| | ||||||||| || |||| ||||||| ||| || || ||| | | || Sbjct 123547 ACTTGGTGACCGACTTGGTACCTTCCGAGATGGCGTGCTTGGAAAGCTCACCGGGGAGGA 123606 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG-C 1485591 | ||||| || |||||||||||||| || | ||| ||| |||||| || || Sbjct 123607 TGAGGCGGACAGCGGTCTGGATCTCTCGCGACGAGATGGTGGACTTCTTGTT-GTACGAA 123665 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 || || | ||||| ||| ||||||| |||| ||||| | ||| |||||||||| | Sbjct 123666 GCGAGCTTGGAAGCCTCAGTGGCGATGCGCTCGAAGATGTCCTGGACGAACGAGTTCAAG 123725 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 || | ||| | ||||| ||||| || ||||||||| |||||||| || || Sbjct 123726 ATAGCCATGGCCTTGTTCGAGATACCAGTGTCGGGGTGAACCTGCTTAAGGAC 123778 >seq81 Length=91273 Score = 123 bits (136), Expect = 4e-22 Identities = 182/258 (71%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| || || || || |||| ||| ||||| ||||||||||| || | |||||| Sbjct 56695 CTGGTCAACGTATCGTGCAGTGTTGTTGAAGACACGGAGCATGGGAACGATACCGTTGCT 56636 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 | || ||||| || || | ||||| ||| | | || | ||||| | | || Sbjct 56635 GACACCATTGGTACCGGCAATGTAGGAGCCAGTTCCTCGGATGTTGTGGATGTTGAGACC 56576 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||| || || || | ||||||||| | ||||| | || || || |||||||| || || Sbjct 56575 GATACCACCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTC 56516 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||||||||| |||||||| | || || ||||||||| || ||| | | || || Sbjct 56515 GATCGAGTCATCCTTCATGGTGACAAGGAAACACGACGAGAGCTGGGGGTGGGGAGTACC 56456 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 || |||||||| ||||| Sbjct 56455 AGCGTTGAAGAGGGTGGG 56438 Score = 87.8 bits (96), Expect = 3e-11 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 2070052 GCCGCATGGTAGATCGTCTCAAAGATGGTGCGGTTGAGGCGACGCGCGCCGGCGCTCTCC 2070111 || || |||||||| ||||| ||||| ||||||||| || || ||| ||| Sbjct 57450 GCAGCGTGGTAGATGGTCTCGAAGATCTGAACGTTGAGGCGGCGGGCCTCGGGCGACTCA 57391 Query 2070112 CACGGCAGGTCCATCATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCGGC 2070171 | | | |||| || || ||||| || || ||||| || |||| || || || Sbjct 57390 AAAGCGTAGCCCATGATCATGAAGGCGTCAGCAAGACCCTGAACACCGATACCGATGGGT 57331 Query 2070172 CGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGAT 2070227 |||||||||| ||| || | || |||||||| || ||||||| |||||||||||| Sbjct 57330 CGGTGGCGCATGTTGGACTTGCGAGCCTCGGGGACAGGGTAGTAGTTGATGTCGAT 57275 >seq126 Length=42303 Score = 100 bits (110), Expect = 5e-15 Identities = 275/414 (66%), Gaps = 8/414 (2%) Strand=Plus/Minus Query 2018913 CTCCCGTGGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCAC 2018972 ||||| ||| |||||||||||||||| || |||||| |||| |||||| | || Sbjct 22944 CTCCCCTGGGTCGAAAAGTACCGCCCTCTCCGCCTAGACGACGTCGTTGGCAACAAAGAC 22885 Query 2018973 GCCGTTGCCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCA-ACCTCTTGCTGGC 2019031 || | | | ||||| | | |||| |||||| ||||| ||||| | | | Sbjct 22884 ACCATCGACCGTCTCAAAGTCATTCAATCCGATGGCAAC-TGCCCGCACCTCCTCATCTC 22826 Query 2019032 GGGCCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTG-- 2019089 |||| ||||| | ||||| ||||| | || || || ||| ||||| ||| Sbjct 22825 CGGCCTCCCCGGTATTGGCAAAACCACCTCCGTCCTCTGTCT--CGCACGTGCCCTTCTT 22768 Query 2019090 GGCGCGGCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGAC 2019149 |||| || | | || | || || |||||||| || || ||||| || || || ||| Sbjct 22767 GGCGACGCATACAAAGAAGGAGTCCTTGAACTCAACGCATCGGACGAACGAGGAGTTGAC 22708 Query 2019150 GTCGTGCGTAGAATCATCAAGCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGC 2019209 || || |||| | |||||| | || ||| | | || |||| || || | Sbjct 22707 GTTGTACGTAACAAGATCAAGACTTTTGCCCAGAAGAAAGTCTCTTTGCCTCCTGGTAGG 22648 Query 2019210 CACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTC 2019269 || ||| | ||||||||||||||||| || | | || | || |||||||| || | Sbjct 22647 CATAAGATTATCATCCTCGATGAGGCGGATAGTATGACTCCCGCCGCCCAGCAAGCGTTG 22588 Query 2019270 CGATCGACCATGGAAAAGTACACCAACACGACGCGGTT-TGCGCTGGCCTGCAA 2019322 ||| || ||||| | ||| ||||||| || |||| ||| | |||||||| Sbjct 22587 CGACGTACGATGGAGATCTACTCCAACACAACAAGGTTCTGC-TTTGCCTGCAA 22535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7914880550636760