Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq69 161 2e-33
seq35 138 2e-26
seq81 123 4e-22
seq126 100 5e-15
>seq69
Length=107628
Score = 161 bits (178), Expect = 2e-33
Identities = 214/295 (73%), Gaps = 9/295 (3%)
Strand=Plus/Minus
Query 794376 GAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAA 794435
||| ||||||||||| || |||||||||||||| ||||||| | ||| || |||||
Sbjct 12564 GAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAACGAACCGGAGAA 12505
Query 794436 AAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTC 794495
||||| || ||||||||||| || ||||||| || |||||||||||| | | | ||
Sbjct 12504 GAAGATACCTTCGACGGCGGCGAAAGCGACGAGACGTTCGGCAAAAGTGGCGCGACGGTC 12445
Query 794496 TTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGAT 794555
|||||| | ||||| || || |||| | | || ||| | || ||||
Sbjct 12444 ---CGAGATCCAACGAAGAGCCCAGTCGGCTTTTTGCTTGACGACGGGGATGGTCTCGAC 12388
Query 794556 GGCGCGAAAGAGG---TGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAG 794612
|||| |||||| | | || |||| || || || ||||||||||||||||||
Sbjct 12387 GGCGTCGAAGAGGAACTCGCGCTGCTCG---GGTTCGCGGATGTAGGTGTCGATGAGGAG 12331
Query 794613 CGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667
|||||||| || ||||||||||| || || ||||||||| || || ||||||
Sbjct 12330 GGAGTAGGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAG 12276
Score = 87.8 bits (96), Expect = 3e-11
Identities = 97/127 (76%), Gaps = 2/127 (2%)
Strand=Plus/Minus
Query 794007 CCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCG 794066
|||||| || |||| |||||||| ||| | |||||||| ||||||||| ||||
Sbjct 12806 CCGAGCTGCGTGAGCAATCGGTCGGCCACGTACTCAATGTAGGTGCACATGAGCTTGGCG 12747
Query 794067 TTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAA-CTCTTTCTCGATCTCGAC 794125
|||||||| ||||||| ||||||| | ||| | | || ||||| ||||||||| ||
Sbjct 12746 TTCATGCCAATGAGCGAAACGGGCAATGCATCGGTCAAGAAGCTCTT-CTCGATCTCTAC 12688
Query 794126 GGCCTCG 794132
||||||
Sbjct 12687 AGCCTCG 12681
>seq35
Length=190639
Score = 138 bits (152), Expect = 2e-26
Identities = 172/233 (74%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532
|||||||||| | ||||||||| || |||| ||||||| ||| || || ||| | | ||
Sbjct 123547 ACTTGGTGACCGACTTGGTACCTTCCGAGATGGCGTGCTTGGAAAGCTCACCGGGGAGGA 123606
Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG-C 1485591
| ||||| || |||||||||||||| || | ||| ||| |||||| || ||
Sbjct 123607 TGAGGCGGACAGCGGTCTGGATCTCTCGCGACGAGATGGTGGACTTCTTGTT-GTACGAA 123665
Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651
|| || | ||||| ||| ||||||| |||| ||||| | ||| |||||||||| |
Sbjct 123666 GCGAGCTTGGAAGCCTCAGTGGCGATGCGCTCGAAGATGTCCTGGACGAACGAGTTCAAG 123725
Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704
|| | ||| | ||||| ||||| || ||||||||| |||||||| || ||
Sbjct 123726 ATAGCCATGGCCTTGTTCGAGATACCAGTGTCGGGGTGAACCTGCTTAAGGAC 123778
>seq81
Length=91273
Score = 123 bits (136), Expect = 4e-22
Identities = 182/258 (71%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||| || || || || |||| ||| ||||| ||||||||||| || | ||||||
Sbjct 56695 CTGGTCAACGTATCGTGCAGTGTTGTTGAAGACACGGAGCATGGGAACGATACCGTTGCT 56636
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
| || ||||| || || | ||||| ||| | | || | ||||| | | ||
Sbjct 56635 GACACCATTGGTACCGGCAATGTAGGAGCCAGTTCCTCGGATGTTGTGGATGTTGAGACC 56576
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
||| || || || | ||||||||| | ||||| | || || || |||||||| || ||
Sbjct 56575 GATACCACCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTC 56516
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
||||||||| |||||||| | || || ||||||||| || ||| | | || ||
Sbjct 56515 GATCGAGTCATCCTTCATGGTGACAAGGAAACACGACGAGAGCTGGGGGTGGGGAGTACC 56456
Query 2073780 GGCATTGAAGAGCGTGGG 2073797
|| |||||||| |||||
Sbjct 56455 AGCGTTGAAGAGGGTGGG 56438
Score = 87.8 bits (96), Expect = 3e-11
Identities = 125/176 (71%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 2070052 GCCGCATGGTAGATCGTCTCAAAGATGGTGCGGTTGAGGCGACGCGCGCCGGCGCTCTCC 2070111
|| || |||||||| ||||| ||||| ||||||||| || || ||| |||
Sbjct 57450 GCAGCGTGGTAGATGGTCTCGAAGATCTGAACGTTGAGGCGGCGGGCCTCGGGCGACTCA 57391
Query 2070112 CACGGCAGGTCCATCATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCGGC 2070171
| | | |||| || || ||||| || || ||||| || |||| || || ||
Sbjct 57390 AAAGCGTAGCCCATGATCATGAAGGCGTCAGCAAGACCCTGAACACCGATACCGATGGGT 57331
Query 2070172 CGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGAT 2070227
|||||||||| ||| || | || |||||||| || ||||||| ||||||||||||
Sbjct 57330 CGGTGGCGCATGTTGGACTTGCGAGCCTCGGGGACAGGGTAGTAGTTGATGTCGAT 57275
>seq126
Length=42303
Score = 100 bits (110), Expect = 5e-15
Identities = 275/414 (66%), Gaps = 8/414 (2%)
Strand=Plus/Minus
Query 2018913 CTCCCGTGGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCAC 2018972
||||| ||| |||||||||||||||| || |||||| |||| |||||| | ||
Sbjct 22944 CTCCCCTGGGTCGAAAAGTACCGCCCTCTCCGCCTAGACGACGTCGTTGGCAACAAAGAC 22885
Query 2018973 GCCGTTGCCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCA-ACCTCTTGCTGGC 2019031
|| | | | ||||| | | |||| |||||| ||||| ||||| | | |
Sbjct 22884 ACCATCGACCGTCTCAAAGTCATTCAATCCGATGGCAAC-TGCCCGCACCTCCTCATCTC 22826
Query 2019032 GGGCCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTG-- 2019089
|||| ||||| | ||||| ||||| | || || || ||| ||||| |||
Sbjct 22825 CGGCCTCCCCGGTATTGGCAAAACCACCTCCGTCCTCTGTCT--CGCACGTGCCCTTCTT 22768
Query 2019090 GGCGCGGCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGAC 2019149
|||| || | | || | || || |||||||| || || ||||| || || || |||
Sbjct 22767 GGCGACGCATACAAAGAAGGAGTCCTTGAACTCAACGCATCGGACGAACGAGGAGTTGAC 22708
Query 2019150 GTCGTGCGTAGAATCATCAAGCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGC 2019209
|| || |||| | |||||| | || ||| | | || |||| || || |
Sbjct 22707 GTTGTACGTAACAAGATCAAGACTTTTGCCCAGAAGAAAGTCTCTTTGCCTCCTGGTAGG 22648
Query 2019210 CACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTC 2019269
|| ||| | ||||||||||||||||| || | | || | || |||||||| || |
Sbjct 22647 CATAAGATTATCATCCTCGATGAGGCGGATAGTATGACTCCCGCCGCCCAGCAAGCGTTG 22588
Query 2019270 CGATCGACCATGGAAAAGTACACCAACACGACGCGGTT-TGCGCTGGCCTGCAA 2019322
||| || ||||| | ||| ||||||| || |||| ||| | ||||||||
Sbjct 22587 CGACGTACGATGGAGATCTACTCCAACACAACAAGGTTCTGC-TTTGCCTGCAA 22535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7914880550636760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |