Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq144 143 2e-29
seq62 136 3e-27
seq33 134 9e-27
seq24 102 5e-17
>seq144
Length=29207
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
||||| | ||| | || || ||||||| |||||||||||||| ||||| ||||||||
Sbjct 8867 CCTCCGCGCAAACGAAGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 8808
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| |||| ||||| || || ||||| || || |||||||| | ||
Sbjct 8807 AGGGTGCGACCATCTTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCAGGGGGG 8748
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| ||||||||||| | || || ||||| | |||| || || ||||||
Sbjct 8747 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACT 8688
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | || ||||||||||| ||||| ||||| |||||||| |||||
Sbjct 8687 TCCAATGTGATGGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 8641
Score = 129 bits (142), Expect = 4e-25
Identities = 157/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | |||| ||||||||| ||||| |||||||| ||| | || ||||
Sbjct 8168 AGGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCATCT 8109
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| || || || |||||||| || || |||||||| | || | |||||||||||
Sbjct 8108 TCCAACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 8049
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| ||||| |||||| | || | || | ||| || || | ||| ||||||
Sbjct 8048 TGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTC 7989
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATGA 34979
|| || || || ||||| ||||||||||||||||
Sbjct 7988 TTACCGGTCAGAGTCTTGACAAAGATCTGCATGA 7955
Score = 116 bits (128), Expect = 2e-21
Identities = 155/214 (72%), Gaps = 1/214 (0%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|| ||| ||||| | |||||||||||||| ||||| |||||||| ||| |||| | ||
Sbjct 9082 CAAGACAAGGTGCAAAGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCGTC 9023
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGT-CTTGCGGCACCCCCTCCTTGT 34883
|||| ||||| || || ||||| || || ||||||| | | || | |||||||||
Sbjct 9022 TTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCCAGGGGGAATATCCTCCTTGT 8963
Query 34884 CGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| | || || |||||| | || | || | ||| || || | ||| || |
Sbjct 8962 CTTGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGACGACTCAACCTCGAGGGTGATCG 8903
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||||| ||||| ||||| ||||||||||||||
Sbjct 8902 TCTTTCCAGTGAGCGTCTTGACAAAGATCTGCAT 8869
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||||| ||||||||||| |||||||| ||||| || || | || | ||
Sbjct 8624 AGAACGAGGTGAAGCGTGCTCTCCTTTTGAATGTTGTAGTCGGAGAGTGTTCGGCCGTCC 8565
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| ||||||||||| || ||||| || |||||||| || | || | || ||||||||
Sbjct 8564 TCAAGTTGCTTTCCAGCAAAGATGAGGCGTTGCTGATCAGGTGGAATGCCTTCCTTGTCC 8505
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | ||| | |||||| || | || ||||||
Sbjct 8504 TGGATCTTGGCCTTTACGTTGTCGATGGTATCAGAAGACTCGACCTCGAGAGTAATGGTC 8445
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || ||||| || || |||||||||||
Sbjct 8444 TTGCCTGTAAGGGTTTTGACGAAGATCTGCAT 8413
Score = 84.2 bits (92), Expect = 1e-11
Identities = 136/195 (70%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|| ||||| ||||| || || || | | |||| | || || || ||||||||||||||
Sbjct 8375 TCTTTCTGGATGTTGTAATCGGACAAGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAA 8316
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|| || || ||||| || | || | || |||||||| | || || ||||||
Sbjct 8315 ATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGT-- 8258
Query 34907 GCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTT 34962
||||||| ||| | ||| || || | || |||||||| || || | ||||||
Sbjct 8257 --TATCGATAGTGTCAGACGACTCAACCTCGAGAGTAATGGTCTTGCCGGTCAAGGTCTT 8200
Query 34963 TACAAAGATCTGCAT 34977
|| |||||||||||
Sbjct 8199 GACGAAGATCTGCAT 8185
>seq62
Length=118391
Score = 136 bits (150), Expect = 3e-27
Identities = 162/220 (74%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| ||| ||||||||| ||||| |||||||| ||| |||| ||||
Sbjct 71427 AGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCC 71486
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || || ||||| || || |||||||| | || | |||||||| ||
Sbjct 71487 TCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGTGGGATACCCTCCTTATCC 71546
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || || ||| || || | ||| ||||||
Sbjct 71547 TGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTC 71606
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATGATAGTGG 34985
|| || ||||||||||| |||||||||||||| |||||
Sbjct 71607 TTGCCGGTGAGGGTCTTGACAAAGATCTGCATCTGAGTGG 71646
Score = 98.7 bits (108), Expect = 6e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| |||| ||| |||||||| ||||| || || || || |||| | ||
Sbjct 71199 AGGACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAATCTGAAAGAGTGCGGCCGTCT 71258
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||| || || ||||| || | || | || ||||||||
Sbjct 71259 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCTTCCTTGTCC 71318
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | |||||| |||| || ||||||
Sbjct 71319 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCGACTTCAAGAGTGATGGTC 71378
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || | ||||| ||||||||||||||
Sbjct 71379 TTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 71410
>seq33
Length=194022
Score = 134 bits (148), Expect = 9e-27
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||||| ||| ||||||||| ||||| |||||||| ||| |||| ||||
Sbjct 184326 AGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGTCCATCT 184267
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||| || || ||||| || | || | || ||||||||
Sbjct 184266 TCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 184207
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | ||| || |||| ||| ||||||
Sbjct 184206 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTC 184147
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| ||||| |||||||| ||||||||||||||
Sbjct 184146 TTGCCCGTAAGGGTCTTAACAAAGATCTGCAT 184115
>seq24
Length=214592
Score = 102 bits (112), Expect = 5e-17
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| ||| ||||||||| ||||| |||||||| ||| |||| | ||
Sbjct 73383 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 73442
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| ||||||||||| || || |||||||| | || | |||||||||||
Sbjct 73443 TCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTC 73501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325641833147960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |