Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq144 100 2e-16
seq62 95.1 8e-15
>seq144
Length=29207
Score = 100 bits (110), Expect = 2e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| | ||||| || | ||| ||| || || |||||||| || ||
Sbjct 8184 ACCACCACGGAGACGGAGGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGA 8125
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| || || | || ||||| ||||| || || || || | ||||||||| || | ||
Sbjct 8124 GAGGGTTCGGCCATCTTCCAACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGG 8065
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700
| ||| || ||||| |||||| || | | | |||| ||||||| || ||||
Sbjct 8064 GATACCCTCCTTGTCCTGAATTTTGGCCTTGA-CGTTGTCAATGGTGTCGGAAGACTCCA 8006
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | ||||| || ||||| || | || || ||||||||||||||
Sbjct 8005 CCTCGAGGGTGATGGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCAT 7957
Score = 96.9 bits (106), Expect = 2e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| || | |||||| | ||| | || ||||||||||| || || |||||||| || ||
Sbjct 8868 ACCTCCGCGCAAACGAAGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGA 8809
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| | || ||||| || || || ||||| || | ||||||||| || | ||
Sbjct 8808 AAGGGTGCGACCATCTTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCAGGGGG 8749
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || ||||| ||| || | | |||| ||| | ||||| || || |
Sbjct 8748 GATGCCCTCCTTGTCCTGAATCTT-GGCCTTGACATTGTCAATCGTGTCCGAGGACTCGA 8690
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || || ||||| | || || |||||||| ||||||
Sbjct 8689 CTTCCAATGTGATGGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCATA 8640
Score = 96.9 bits (106), Expect = 2e-15
Identities = 155/219 (71%), Gaps = 3/219 (1%)
Strand=Plus/Minus
Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593
||| || || | || | ||||||||| || || |||||||| || ||||| ||||| |
Sbjct 9085 ACGCAAGACAAGGTGCAAAGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGACC 9026
Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCAC-ACCTTCTT 33652
||| ||||| || || || ||||| || | ||||||||| || | || | | | || |
Sbjct 9025 GTCTTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCCAGGGGGAATATCCTCCT 8966
Query 33653 TGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTG 33711
|||| ||| || || | | | |||| |||||| || || || || | |||
Sbjct 8965 TGTCTTGAATCTTGGCCTTGA-CGTTGTCAATGGTGTCCGACGACTCAACCTCGAGGGTG 8907
Query 33712 ATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
||||| || || || | ||| || |||||||||||||||
Sbjct 8906 ATCGTCTTTCCAGTGAGCGTCTTGACAAAGATCTGCATA 8868
Score = 93.3 bits (102), Expect = 3e-14
Identities = 145/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606
|| || |||||||| ||||| |||||||| ||||||||||| || |||| || | |||
Sbjct 8615 TGAAGCGTGCTCTCCTTTTGAATGTTGTAGTCGGAGAGTGTTCGGCCGTCCTCAAGTTGC 8556
Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666
||||| ||||| || | || |||||||| | || | ||||| ||||| || ||
Sbjct 8555 TTTCCAGCAAAGATGAGGCGTTGCTGATCAGGTGGAATGCCTTCCTTGTCCTGGATCTT- 8497
Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725
| | || | ||| | ||| || || || || || | || || || || |||||
Sbjct 8496 GGCCTTTACGTTGTCGATGGTATCAGAAGACTCGACCTCGAGAGTAATGGTCTTGCCTGT 8437
Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750
| ||||| || ||||||||||||
Sbjct 8436 AAGGGTTTTGACGAAGATCTGCATA 8412
>seq62
Length=118391
Score = 95.1 bits (104), Expect = 8e-15
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||| | | ||| | |||||||| || ||| || || || ||||||||||| |
Sbjct 71182 CACCACCACGGAGACGGAGGACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAATCTG 71241
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| || ||||| |||| || | || || ||||| || || | ||||||||||| | |
Sbjct 71242 AAAGAGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAG 71301
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | ||||| ||||| || || | | || | ||| | |||||| || ||
Sbjct 71302 GGATGCCTTCCTTGTCCTGGATCTT-GGCCTTGACGTTGTCGATGGTGTCCGAAGACTCG 71360
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| |||| ||||| || || || || || || || |||||||||||||||
Sbjct 71361 ACTTCAAGAGTGATGGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCATA 71411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328652561932800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |