Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq81 131 2e-25
seq144 95.1 1e-14
>seq81
Length=91273
Score = 131 bits (144), Expect = 2e-25
Identities = 617/965 (64%), Gaps = 29/965 (3%)
Strand=Plus/Minus
Query 147460 GCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCG 147519
||||| || |||| |||||||| || ||| |||| | ||||||| | ||| ||
Sbjct 57180 GCGATCGAAGCCAAGTTGCAGACAGCGACCTCATCGGGTGCACTGTACTCGATGATCTCT 57121
Query 147520 GCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCAC 147579
| ||| |||||| ||| || ||| || | || | ||| ||||| || || |||
Sbjct 57120 GTGCAAAGGTTGGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCA 57061
Query 147580 GCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTA 147639
||||| ||| | || ||| | || || |||||| || | || | ||| | ||
Sbjct 57060 GCGTCCTTGTAAAGGATGAAGGGGTTACCAGTCTCGGTCTGGGACTCGAGGATGG-CGTA 57002
Query 147640 TGC-AGGTCCTGCGCTCGCACCCGCTGCCGAT--AGCGGCCCTCGTTTTCGTACCGCTCG 147696
|| | ||| || || | ||| | |||| |||||| ||||| ||||||
Sbjct 57001 CCAGAGCTTCTGAGCCTTGAC--GGTGCGCTTGGAGCGACCCTCGGCCTCGTAGCGCTCG 56944
Query 147697 TACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACAC 147756
|| | ||||||||||| ||||||||||| || || || |||||||||| | || |||
Sbjct 56943 TAGAGACGCTCAAACTCCTCGCCGTAGCAGTCAGCGAGACCGGGACACTCGTTAGGGCAC 56884
Query 147757 ATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGC 147816
|| |||||||| ||| | | || | ||| || ||||| || ||||| ||
Sbjct 56883 ATGAGCGACCAGTCACCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGAACCCAGAGG 56824
Query 147817 GCGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAA--TTAA 147874
||||| | || || || || ||||| || ||| || | | | ||
Sbjct 56823 GCGTAGAAGAGCTCACGGGCACGTACCTCCTCCTTACCGTGGTTC--TTGCGGAGGTCAA 56766
Query 147875 GCA-CGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC 147933
| | | | | ||| || | |||||| || |||||||||| ||| | ||||| ||||
Sbjct 56765 GGAACTCGA-AGACATCCGAGTGCCAAGGCTCAATGTAGATGGCAAAGGCACCGGGACGC 56707
Query 147934 TTT---CCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCC 147990
|| || |||||||| || | || | ||||||| || || || | |||||| |
Sbjct 56706 TTGTTACCACCCTGGTCAACGTATCGTGCAGTGTTGTTGAAGACACGGAGCATGGGAACG 56647
Query 147991 AGGCCGCTCGCAGTG-CCGTTGGT---GGAATTGATCTTGCTGCCGCGGGCTCGCACTTC 148046
| ||| | || | || ||||| || | || | | ||| |||| | |
Sbjct 56646 ATACCGTT-GCTGACACCATTGGTACCGGCAATG---TAGGAGCCAGTTCCTCGGATGTT 56591
Query 148047 GTGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGT 148106
||| | ||| | || || || || || ||| || || ||||| | ||
Sbjct 56590 GTGGATGTTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGT 56531
Query 148107 CGTGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTG 148166
|||||| |||||||| ||| | || | | | | |||||||| | | ||
Sbjct 56530 GTCGTAGATACCGTCGATCGAGTCATCCTTCATGGTGACAAGGAAACACGACGAGAGCTG 56471
Query 148167 CGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACT 148226
|| | || || || ||| |||||||| ||||| || || || || ||
Sbjct 56470 GGGGTGGGGAGTACCAGCGTTGAAGAGGGTGGGGGAAGCGTGTGTGAAGAACTTCTG--- 56414
Query 148227 CATCATGCGAT---ACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGC 148283
| |||| ||| | ||||| || ||| ||||||||| |||||||| || || | ||
Sbjct 56413 CGACATGAGATTGTAGGTCTCGATGGCGCTTTCGATGTCCTCGCCGTGGATACCAACAGC 56354
Query 148284 GACGCGCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATA 148343
||| ||||||||||||||||| || || || ||||| | ||| || |||||| ||
Sbjct 56353 GACACGCATGAGCATGTGCTGGGGACGCTCAGCAACCTTGCCGTTAATACGGAGAAGGTA 56294
Query 148344 TCCATTTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGAT 148403
|||||||| ||| |||| ||| | ||||| | || || |||||||| |||
Sbjct 56293 GGATCGCTCGAGGGTCTTGAAACCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATGAT 56234
Query 148404 GGCCG 148408
||||
Sbjct 56233 TGCCG 56229
>seq144
Length=29207
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
||||| || | | | ||||| || || ||||||||||| | ||| || ||||||
Sbjct 8165 ACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCATCTTCC 8106
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
| ||||||||| | |||| |||||||| || || ||||| || || || || || |
Sbjct 8105 AACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGA 8046
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
||||| || | | || | || |||| | |||||| |||| || | || |||
Sbjct 8045 ATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTA 7986
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCATGAC 132126
|| |||||||| || | || |||||||||||
Sbjct 7985 CCGGTCAGAGTCTTGACAAAGATCTGCATGAC 7954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476534703902400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |