Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq81 131 2e-25 seq144 95.1 1e-14 >seq81 Length=91273 Score = 131 bits (144), Expect = 2e-25 Identities = 617/965 (64%), Gaps = 29/965 (3%) Strand=Plus/Minus Query 147460 GCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCG 147519 ||||| || |||| |||||||| || ||| |||| | ||||||| | ||| || Sbjct 57180 GCGATCGAAGCCAAGTTGCAGACAGCGACCTCATCGGGTGCACTGTACTCGATGATCTCT 57121 Query 147520 GCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCAC 147579 | ||| |||||| ||| || ||| || | || | ||| ||||| || || ||| Sbjct 57120 GTGCAAAGGTTGGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCA 57061 Query 147580 GCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTA 147639 ||||| ||| | || ||| | || || |||||| || | || | ||| | || Sbjct 57060 GCGTCCTTGTAAAGGATGAAGGGGTTACCAGTCTCGGTCTGGGACTCGAGGATGG-CGTA 57002 Query 147640 TGC-AGGTCCTGCGCTCGCACCCGCTGCCGAT--AGCGGCCCTCGTTTTCGTACCGCTCG 147696 || | ||| || || | ||| | |||| |||||| ||||| |||||| Sbjct 57001 CCAGAGCTTCTGAGCCTTGAC--GGTGCGCTTGGAGCGACCCTCGGCCTCGTAGCGCTCG 56944 Query 147697 TACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACAC 147756 || | ||||||||||| ||||||||||| || || || |||||||||| | || ||| Sbjct 56943 TAGAGACGCTCAAACTCCTCGCCGTAGCAGTCAGCGAGACCGGGACACTCGTTAGGGCAC 56884 Query 147757 ATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGC 147816 || |||||||| ||| | | || | ||| || ||||| || ||||| || Sbjct 56883 ATGAGCGACCAGTCACCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGAACCCAGAGG 56824 Query 147817 GCGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAA--TTAA 147874 ||||| | || || || || ||||| || ||| || | | | || Sbjct 56823 GCGTAGAAGAGCTCACGGGCACGTACCTCCTCCTTACCGTGGTTC--TTGCGGAGGTCAA 56766 Query 147875 GCA-CGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC 147933 | | | | | ||| || | |||||| || |||||||||| ||| | ||||| |||| Sbjct 56765 GGAACTCGA-AGACATCCGAGTGCCAAGGCTCAATGTAGATGGCAAAGGCACCGGGACGC 56707 Query 147934 TTT---CCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCC 147990 || || |||||||| || | || | ||||||| || || || | |||||| | Sbjct 56706 TTGTTACCACCCTGGTCAACGTATCGTGCAGTGTTGTTGAAGACACGGAGCATGGGAACG 56647 Query 147991 AGGCCGCTCGCAGTG-CCGTTGGT---GGAATTGATCTTGCTGCCGCGGGCTCGCACTTC 148046 | ||| | || | || ||||| || | || | | ||| |||| | | Sbjct 56646 ATACCGTT-GCTGACACCATTGGTACCGGCAATG---TAGGAGCCAGTTCCTCGGATGTT 56591 Query 148047 GTGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGT 148106 ||| | ||| | || || || || || ||| || || ||||| | || Sbjct 56590 GTGGATGTTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGT 56531 Query 148107 CGTGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTG 148166 |||||| |||||||| ||| | || | | | | |||||||| | | || Sbjct 56530 GTCGTAGATACCGTCGATCGAGTCATCCTTCATGGTGACAAGGAAACACGACGAGAGCTG 56471 Query 148167 CGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACT 148226 || | || || || ||| |||||||| ||||| || || || || || Sbjct 56470 GGGGTGGGGAGTACCAGCGTTGAAGAGGGTGGGGGAAGCGTGTGTGAAGAACTTCTG--- 56414 Query 148227 CATCATGCGAT---ACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGC 148283 | |||| ||| | ||||| || ||| ||||||||| |||||||| || || | || Sbjct 56413 CGACATGAGATTGTAGGTCTCGATGGCGCTTTCGATGTCCTCGCCGTGGATACCAACAGC 56354 Query 148284 GACGCGCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATA 148343 ||| ||||||||||||||||| || || || ||||| | ||| || |||||| || Sbjct 56353 GACACGCATGAGCATGTGCTGGGGACGCTCAGCAACCTTGCCGTTAATACGGAGAAGGTA 56294 Query 148344 TCCATTTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGAT 148403 |||||||| ||| |||| ||| | ||||| | || || |||||||| ||| Sbjct 56293 GGATCGCTCGAGGGTCTTGAAACCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATGAT 56234 Query 148404 GGCCG 148408 |||| Sbjct 56233 TGCCG 56229 >seq144 Length=29207 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | ||||| || || ||||||||||| | ||| || |||||| Sbjct 8165 ACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCATCTTCC 8106 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 | ||||||||| | |||| |||||||| || || ||||| || || || || || | Sbjct 8105 AACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGA 8046 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| || | | || | || |||| | |||||| |||| || | || ||| Sbjct 8045 ATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTA 7986 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCATGAC 132126 || |||||||| || | || ||||||||||| Sbjct 7985 CCGGTCAGAGTCTTGACAAAGATCTGCATGAC 7954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476534703902400