Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq69 96.9 3e-15 >seq69 Length=107628 Score = 96.9 bits (106), Expect = 3e-15 Identities = 131/182 (72%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| || ||| | ||| ||||| |||||| || ||||| ||||| || ||||| Sbjct 12241 GCTCGACGAGATTCTCGTTAACGATACCGTCGGAAGCGGCGAAGAAGGCAAGGACGTGAG 12182 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | ||| || || |||||||| || || |||| ||| || | || |||||||| | Sbjct 12181 AGATGAAGTGACGCTCGTTGTCGTTGAGCTTGTTGTCCCAATCGTGAAGATCCTTGGAAA 12122 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 ||||||||||||| | ||||| | | | |||||||||||| ||||| |||| Sbjct 12121 GGTCGATCTCTTCGGCGGTCCAGAAGGAGGCTTCGGCCTTCTTGTACATTTGCC--AGAT 12064 Query 110892 CT 110893 || Sbjct 12063 CT 12062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445022962348800