Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq69 221 2e-51 seq35 109 8e-18 seq81 91.5 2e-12 seq10357 86.0 9e-11 >seq69 Length=107628 Score = 221 bits (244), Expect = 2e-51 Identities = 367/518 (71%), Gaps = 34/518 (7%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || |||||||| |||||||| ||||||||||| ||| |||||| Sbjct 12063 GATCTGGCAAATGTAC-AAGAAGGCCGAAGCCTCCTTCTGGACCGCCGAAGAGATCGACC 12121 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTC 1455887 | | || |||| | |||| ||| | |||| ||||||| || ||| Sbjct 12122 TTTCCAAGGATCTTCACGAT----TGGGACAACAAGCTCAACGACAACGAGCGTCACTTC 12177 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| |||||||| ||||| || |||||| ||| || ||||| |||||| || | Sbjct 12178 ATCTCTCACGTCCTTGCCTTCTT-CGCCGCTTCCGACGGTATCGTTAACGAGAATCTCGT 12236 Query 1455948 CGGCCGCTT----TATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCC 1456003 || || || | |||| |||||| | || || || | || ||||| |||| Sbjct 12237 CGAGCGATTCTCCTCTGAA----GTCCAAGCCGCCGAAGCTCGCTGCTTCTACGGTTTCC 12292 Query 1456004 AGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCA 1456063 ||||| || || ||||||||||| ||||||||||| ||||| |||||||||||| || Sbjct 12293 AGATCATGATGGAGAACATCCACTCCGAAACCTACTCCCTCCTCATCGACACCTACATCC 12352 Query 1456064 AGGACCCGGTCGAGAAG---GACCACCTCTTTCGCGCCATCGACACGGT-GCCGTCGGTG 1456119 || || |||| || || |||||| |||| |||| || | ||||| || Sbjct 12353 GCGAACC---CGAGCAGCGCGAGTTCCTCTTCGACGCCGTCGAGACCATCCCCGTC-GTC 12408 Query 1456120 AGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACAC-TTTGCC 1456178 | | |||| ||||||||||| | ||||| | ||| | | || ||| |||||| Sbjct 12409 AAGCAAAAAGCCGACTGGGCTCTTCGTTGGAT---CTCGGACCGTCGCGCCACTTTTGCC 12465 Query 1456179 GAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCC 1456237 || || ||||||| || |||| |||||| || ||||| ||||| || ||| || Sbjct 12466 GAACGTCTCGTCGCTTTCGCCGCCGTCGAAGGTATCTTCTTCTCCGGTTCGTTCGCTTCC 12525 Query 1456238 ATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||||| |||||||||||||| || |||||||||||||| Sbjct 12526 ATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCT 12563 >seq35 Length=190639 Score = 109 bits (120), Expect = 8e-18 Identities = 174/248 (70%), Gaps = 14/248 (6%) Strand=Plus/Minus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| ||| |||||| || || |||||||| |||||| || | | ||| Sbjct 123799 TACTCCACCTACATCTACCGTGTCCTTAAGCAGGTTCACCCCGACACTGGT-----ATC- 123746 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 || |||||| ||||| | ||| |||||||||| ||| | ||||| |||| ||||||| | Sbjct 123745 TCGAACAAGGCCATGGCTATCTTGAACTCGTTCGTCCAGGACATCTTCGAGCGCATCGCC 123686 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCC----AACAAGCGCAACACGATCGGCACGCGCGA 725074 || ||||| || || |||| | |||||| ||| ||| |||| || Sbjct 123685 ACTGAGGCTT----CCAAGCTCGCTTCGTACAACAAGAAGTCCACCATCTCGTCGCGAGA 123630 Query 725075 GATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGA 725134 |||||||||||| || ||||| ||| | | ||| || || ||| ||||||| |||| || Sbjct 123629 GATCCAGACCGCTGTCCGCCTCATCCTCCCCGGTGAGCTTTCCAAGCACGCCATCTCGGA 123570 Query 725135 GGGCACCA 725142 || |||| Sbjct 123569 AGGTACCA 123562 >seq81 Length=91273 Score = 91.5 bits (100), Expect = 2e-12 Identities = 284/434 (65%), Gaps = 20/434 (5%) Strand=Plus/Plus Query 261806 GGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTGGCTGGACCTC 261865 || ||||||||| |||| | || || |||||| | || || || | | || |||||| Sbjct 56714 GGTGCCTTTGCCATCTACATTGAGCCTTGGCACTCGGATGTCTTCGAGTTCCTTGACCTC 56773 Query 261866 AAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTTTTACGGCCTG 261925 ||||||||||| |||| ||| || || | || || || ||||| |||| ||| Sbjct 56774 CGCAAGAACCACGGTAAGG-AGGAGGT--AC---GTGCCCGTGAGCTCTTCTACGCCCTC 56827 Query 261926 TGGACGTGCGACCTGTTTATGCGCCGCATGGT-GACCGG--CCGCGACTGGTCGCTCTTT 261982 ||| ||| || || ||| | ||| || | | | | |||||||||||| | Sbjct 56828 TGGGTTCCCGATCTCTTCATGAAGAG---GGTCGAGCAGAACGGTGACTGGTCGCTCATG 56884 Query 261983 TGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCCTTTGACGCCCTCTAT 262042 ||||| |||| ||||| || || ||||| |||| || ||||| ||||| Sbjct 56885 TGCCCTAACGAGTGTCCCGGTCTCGCTGACTGCTACGGCGAGGAGTTTGAGCGTCTCTAC 56944 Query 262043 GAGNNNNNNNNNNNNNNNNNNNNNNC---GCGGACCGTCGTGCCCGCACGACAGATCTGG 262099 ||| | ||| |||||| | | || || || ||||| Sbjct 56945 GAGCGCTACGAGGCCGAGGGTCGCTCCAAGCGCACCGTCAAGGCT-CA-GA-AGCTCTGG 57001 Query 262100 TCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAAGGACGCC 262159 | ||||| ||| | |||| | |||||| || | |||| ||| | ||||||||||| Sbjct 57002 TACGCCATCCTCGAGTCCCAGACCGAGACTGGTAACCCCTTCATCCTTTACAAGGACGCT 57061 Query 262160 GTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG-GCCAACCTGTGCAC 262218 | ||||| | ||||||||| ||||||| || |||| | || | ||||||| ||||| Sbjct 57062 GCCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATCA-AGTGCTCCAACCTTTGCAC 57120 Query 262219 CGAGATCGTCCAGT 262232 |||||| || ||| Sbjct 57121 AGAGATCATCGAGT 57134 >seq10357 Length=219 Score = 86.0 bits (94), Expect = 9e-11 Identities = 122/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 332977 CCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTT 333036 || ||| ||||| || || ||||| || | || |||||||||||| | |||||||||||| Sbjct 5 CCTGAGTGCCTGCTGTGCAGCCGGTGTCATGCTGTCGGCCTCGTCCAAGATGATGATCTT 64 Query 333037 GTGGC-GCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCA 333095 ||| | ||||| |||| || || | ||| || ||||| | || || | Sbjct 65 GTGCCTGCCCG-GCGGAAGCGAGACTTTCTTCTGTGCAAACGTCTTGATCTTGTTTCGAA 123 Query 333096 CGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTC 333144 | || || || || || ||||| || ||||||||||||||||| |||| Sbjct 124 CCACATCGACACCTCGTTCGTCGGAAGCGTTGAGTTCGAGCACACCCTC 172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176572758400080