Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq69 221 2e-51
seq35 109 8e-18
seq81 91.5 2e-12
seq10357 86.0 9e-11
>seq69
Length=107628
Score = 221 bits (244), Expect = 2e-51
Identities = 367/518 (71%), Gaps = 34/518 (7%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || |||||||| |||||||| ||||||||||| ||| ||||||
Sbjct 12063 GATCTGGCAAATGTAC-AAGAAGGCCGAAGCCTCCTTCTGGACCGCCGAAGAGATCGACC 12121
Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTC 1455887
| | || |||| | |||| ||| | |||| ||||||| || |||
Sbjct 12122 TTTCCAAGGATCTTCACGAT----TGGGACAACAAGCTCAACGACAACGAGCGTCACTTC 12177
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
||| |||||||| ||||| || |||||| ||| || ||||| |||||| || |
Sbjct 12178 ATCTCTCACGTCCTTGCCTTCTT-CGCCGCTTCCGACGGTATCGTTAACGAGAATCTCGT 12236
Query 1455948 CGGCCGCTT----TATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCC 1456003
|| || || | |||| |||||| | || || || | || ||||| ||||
Sbjct 12237 CGAGCGATTCTCCTCTGAA----GTCCAAGCCGCCGAAGCTCGCTGCTTCTACGGTTTCC 12292
Query 1456004 AGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCA 1456063
||||| || || ||||||||||| ||||||||||| ||||| |||||||||||| ||
Sbjct 12293 AGATCATGATGGAGAACATCCACTCCGAAACCTACTCCCTCCTCATCGACACCTACATCC 12352
Query 1456064 AGGACCCGGTCGAGAAG---GACCACCTCTTTCGCGCCATCGACACGGT-GCCGTCGGTG 1456119
|| || |||| || || |||||| |||| |||| || | ||||| ||
Sbjct 12353 GCGAACC---CGAGCAGCGCGAGTTCCTCTTCGACGCCGTCGAGACCATCCCCGTC-GTC 12408
Query 1456120 AGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACAC-TTTGCC 1456178
| | |||| ||||||||||| | ||||| | ||| | | || ||| ||||||
Sbjct 12409 AAGCAAAAAGCCGACTGGGCTCTTCGTTGGAT---CTCGGACCGTCGCGCCACTTTTGCC 12465
Query 1456179 GAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCC 1456237
|| || ||||||| || |||| |||||| || ||||| ||||| || ||| ||
Sbjct 12466 GAACGTCTCGTCGCTTTCGCCGCCGTCGAAGGTATCTTCTTCTCCGGTTCGTTCGCTTCC 12525
Query 1456238 ATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
||||| |||||||||||||| || ||||||||||||||
Sbjct 12526 ATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCT 12563
>seq35
Length=190639
Score = 109 bits (120), Expect = 8e-18
Identities = 174/248 (70%), Gaps = 14/248 (6%)
Strand=Plus/Minus
Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958
||||| ||| |||||| || || |||||||| |||||| || | | |||
Sbjct 123799 TACTCCACCTACATCTACCGTGTCCTTAAGCAGGTTCACCCCGACACTGGT-----ATC- 123746
Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018
|| |||||| ||||| | ||| |||||||||| ||| | ||||| |||| ||||||| |
Sbjct 123745 TCGAACAAGGCCATGGCTATCTTGAACTCGTTCGTCCAGGACATCTTCGAGCGCATCGCC 123686
Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCC----AACAAGCGCAACACGATCGGCACGCGCGA 725074
|| ||||| || || |||| | |||||| ||| ||| |||| ||
Sbjct 123685 ACTGAGGCTT----CCAAGCTCGCTTCGTACAACAAGAAGTCCACCATCTCGTCGCGAGA 123630
Query 725075 GATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGA 725134
|||||||||||| || ||||| ||| | | ||| || || ||| ||||||| |||| ||
Sbjct 123629 GATCCAGACCGCTGTCCGCCTCATCCTCCCCGGTGAGCTTTCCAAGCACGCCATCTCGGA 123570
Query 725135 GGGCACCA 725142
|| ||||
Sbjct 123569 AGGTACCA 123562
>seq81
Length=91273
Score = 91.5 bits (100), Expect = 2e-12
Identities = 284/434 (65%), Gaps = 20/434 (5%)
Strand=Plus/Plus
Query 261806 GGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTGGCTGGACCTC 261865
|| ||||||||| |||| | || || |||||| | || || || | | || ||||||
Sbjct 56714 GGTGCCTTTGCCATCTACATTGAGCCTTGGCACTCGGATGTCTTCGAGTTCCTTGACCTC 56773
Query 261866 AAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTTTTACGGCCTG 261925
||||||||||| |||| ||| || || | || || || ||||| |||| |||
Sbjct 56774 CGCAAGAACCACGGTAAGG-AGGAGGT--AC---GTGCCCGTGAGCTCTTCTACGCCCTC 56827
Query 261926 TGGACGTGCGACCTGTTTATGCGCCGCATGGT-GACCGG--CCGCGACTGGTCGCTCTTT 261982
||| ||| || || ||| | ||| || | | | | |||||||||||| |
Sbjct 56828 TGGGTTCCCGATCTCTTCATGAAGAG---GGTCGAGCAGAACGGTGACTGGTCGCTCATG 56884
Query 261983 TGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCCTTTGACGCCCTCTAT 262042
||||| |||| ||||| || || ||||| |||| || ||||| |||||
Sbjct 56885 TGCCCTAACGAGTGTCCCGGTCTCGCTGACTGCTACGGCGAGGAGTTTGAGCGTCTCTAC 56944
Query 262043 GAGNNNNNNNNNNNNNNNNNNNNNNC---GCGGACCGTCGTGCCCGCACGACAGATCTGG 262099
||| | ||| |||||| | | || || || |||||
Sbjct 56945 GAGCGCTACGAGGCCGAGGGTCGCTCCAAGCGCACCGTCAAGGCT-CA-GA-AGCTCTGG 57001
Query 262100 TCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAAGGACGCC 262159
| ||||| ||| | |||| | |||||| || | |||| ||| | |||||||||||
Sbjct 57002 TACGCCATCCTCGAGTCCCAGACCGAGACTGGTAACCCCTTCATCCTTTACAAGGACGCT 57061
Query 262160 GTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG-GCCAACCTGTGCAC 262218
| ||||| | ||||||||| ||||||| || |||| | || | ||||||| |||||
Sbjct 57062 GCCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATCA-AGTGCTCCAACCTTTGCAC 57120
Query 262219 CGAGATCGTCCAGT 262232
|||||| || |||
Sbjct 57121 AGAGATCATCGAGT 57134
>seq10357
Length=219
Score = 86.0 bits (94), Expect = 9e-11
Identities = 122/169 (72%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 332977 CCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTT 333036
|| ||| ||||| || || ||||| || | || |||||||||||| | ||||||||||||
Sbjct 5 CCTGAGTGCCTGCTGTGCAGCCGGTGTCATGCTGTCGGCCTCGTCCAAGATGATGATCTT 64
Query 333037 GTGGC-GCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCA 333095
||| | ||||| |||| || || | ||| || ||||| | || || |
Sbjct 65 GTGCCTGCCCG-GCGGAAGCGAGACTTTCTTCTGTGCAAACGTCTTGATCTTGTTTCGAA 123
Query 333096 CGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTC 333144
| || || || || || ||||| || ||||||||||||||||| ||||
Sbjct 124 CCACATCGACACCTCGTTCGTCGGAAGCGTTGAGTTCGAGCACACCCTC 172
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7176572758400080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |