Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq144 111 1e-19 seq62 93.3 4e-14 seq33 93.3 4e-14 seq24 86.0 6e-12 >seq144 Length=29207 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || || || |||||| || |||||||| || | Sbjct 8183 CCACCACGGAGACGGAGGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 8124 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||||| | || |||| ||| ||||| || || || | ||||||||||| | ||| Sbjct 8123 AGGGTTCGGCCATCTTCCAACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGGG 8064 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | |||||||||| ||| ||| || | |||| | | |||||| || ||||| Sbjct 8063 ATACCCTCCTTGTCC-TGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCAC 8005 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||||| || ||||| |||| ||| || ||||| |||||||| Sbjct 8004 CTCGAGGGTGATGGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCAT 7957 Score = 102 bits (112), Expect = 7e-17 Identities = 164/232 (71%), Gaps = 3/232 (1%) Strand=Plus/Minus Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566 || || ||||| | | ||| || | || || || |||||||| || |||||||| || Sbjct 9099 TTGCCTCCACGGAGACGCAAGACAAGGTGCAAAGTGCTCTCCTTCTGGATGTTGTAGTCC 9040 Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCC-GA 35625 | | ||| || |||| |||| ||||||||| ||||| || | |||||||||||| | Sbjct 9039 GAGAGGGTGCGACCGTCTTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCCAGG 8980 Query 35626 AGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATT 35684 |||| ||||||||| ||||| ||| | |||| | | ||||| ||| | Sbjct 8979 GGGAATATCCTCCTTGTCTTGAATCTTGGCCTTGA-CGTTGTCAATGGTGTCCGACGACT 8921 Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | ||||| | |||||||| || || || | || || ||||| |||||||| Sbjct 8920 CAACCTCGAGGGTGATCGTCTTTCCAGTGAGCGTCTTGACAAAGATCTGCAT 8869 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || ||||||||||||| |||||| || |||| || |||||||| || || || Sbjct 8375 TCTTTCTGGATGTTGTAATCGGACAAGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAA 8316 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | |||||||| || | ||||| || ||||||||| ||||| ||| | | Sbjct 8315 ATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTA 8256 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| ||| || ||||| | || || || || || ||||| || || || Sbjct 8255 TCGATAGTGTCAGACGACTCAACCTCGAGAGTAATGGTCTTGCCGGTCAAGGTCTTGACG 8196 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 8195 AAGATCTGCAT 8185 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| || |||||||| || | | ||| || | || |||| ||||||||| Sbjct 8837 GTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCATCTTCCAACTGCTTACCT 8778 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 ||||| || | ||||||||||| | || | || |||||||||| ||||| ||| Sbjct 8777 GCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTG 8718 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | | |||||| || || || |||| ||||| || || || || | || Sbjct 8717 ACATTGTCAATCGTGTCCGAGGACTCGACTTCCAATGTGATGGTCTTTCCTGTGAGTGTC 8658 Query 35720 TTCACAAATATCTGCAT 35736 || ||||| || ||||| Sbjct 8657 TTGACAAAGATTTGCAT 8641 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 35539 CGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACC 35598 ||| |||||||||||||||||||| |||| | ||||| |||| || || ||||| || Sbjct 8610 CGTGCTCTCCTTTTGAATGTTGTAGTCGGAGAGTGTTCGGCCGTCCTCAAGTTGCTTTCC 8551 Query 35599 CGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTT 35658 ||||| || | || ||||| || | |||| || ||||||||| |||||| ||| Sbjct 8550 AGCAAAGATGAGGCGTTGCTGATCAGGTGGAATGCCTTCCTTGTCCTGGATCTTGGCCTT 8491 Query 35659 CAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAG 35717 | |||| | | || || || || ||||| | || || || || || || | | Sbjct 8490 TA-CGTTGTCGATGGTATCAGAAGACTCGACCTCGAGAGTAATGGTCTTGCCTGTAAGGG 8432 Query 35718 TTTTCACAAATATCTGCAT 35736 |||| || || |||||||| Sbjct 8431 TTTTGACGAAGATCTGCAT 8413 >seq62 Length=118391 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||||| | || ||||| || ||||||||||| | Sbjct 71184 CCACCACGGAGACGGAGGACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAATCTGAA 71243 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| || |||||||| || || || || | |||||||| || | ||| Sbjct 71244 AGAGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGG 71303 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || ||||||||| |||||| ||| | |||| | | ||||| || || || Sbjct 71304 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCCGAAGACTCGAC 71362 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || || |||||||| || ||||| |||||||| Sbjct 71363 TTCAAGAGTGATGGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 71410 >seq33 Length=194022 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || | || || ||||||||||| || || Sbjct 184306 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGTCCATCTTCGAGCTGCTTACCGGCGAA 184247 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||||| || | |||| || ||||||||| |||||| ||| | || Sbjct 184246 GATGAGACGCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGT 184188 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || |||||||| | ||||| || || ||||| | || || | Sbjct 184187 TGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTAA 184128 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 184127 CAAAGATCTGCAT 184115 >seq24 Length=214592 Score = 86.0 bits (94), Expect = 6e-12 Identities = 122/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || |||| || ||||||||||| || || Sbjct 73403 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAA 73462 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | || | | |||||||||| |||| || || | | || Sbjct 73463 GATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATC-TTGGCCTTAACGT 73521 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 || | | |||||| || |||||||| | ||||| || ||||| || Sbjct 73522 TGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTCTTACCTGT 73570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450721247627200