Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq144 138 1e-27 seq33 122 9e-23 seq62 118 1e-21 seq24 107 2e-18 >seq144 Length=29207 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||| || || || ||||| || || |||||||| ||| | |||| | ||| || Sbjct 8393 ACGAGATGGAGGGTCGATTCTTTCTGGATGTTGTAATCGGACAAGGTGCGGCCGTCCTCA 8334 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || ||||| | ||||||||||||||| || |||||||| || || ||| Sbjct 8333 AGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGA 8274 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| || | ||||| ||||| || || |||||||||||||| || Sbjct 8273 ATCTTGGCCTTGACGTTATCGATAGTGTCAGACGACTCAACCTCGAGAGTAATGGTCTTG 8214 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || ||||| || ||||| Sbjct 8213 CCGGTCAAGGTCTTGACGAAGATCTGCAT 8185 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | |||||| | |||||||| |||||| ||||||||||||||||||||| Sbjct 8639 CCACCACGGAGTCGGAGAACGAGGTGAAGCGTGCTCTCCTTTTGAATGTTGTAGTCGGAG 8580 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || || || || || ||||| || | || |||||||| || || Sbjct 8579 AGTGTTCGGCCGTCCTCAAGTTGCTTTCCAGCAAAGATGAGGCGTTGCTGATCAGGTGGA 8520 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || || || ||| | || || || || || || Sbjct 8519 ATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTGTCGATGGTATCAGAAGACTCGACC 8460 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||||||||||| || || || | ||||| ||||| || ||||| Sbjct 8459 TCGAGAGTAATGGTCTTGCCTGTAAGGGTTTTGACGAAGATCTGCAT 8413 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 ||||| ||||| || ||||||||||| | ||| | || || | |||||| || Sbjct 8153 GTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCATCTTCCAACTGTTTACCA 8094 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 || || || | ||||||||| ||||| || || || || || || |||||||| ||| Sbjct 8093 GCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATTTTGGCCTTG 8034 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696 || ||| | |||||||| || ||||| ||||| || ||||| |||||||| | ||| Sbjct 8033 ACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTACCGGTCAGAGTC 7974 Query 134697 TTAACGAAAATTTGCAT 134713 || || || || ||||| Sbjct 7973 TTGACAAAGATCTGCAT 7957 Score = 102 bits (112), Expect = 8e-17 Identities = 162/231 (70%), Gaps = 1/231 (0%) Strand=Plus/Minus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 || ||||| | ||| ||||| || ||||| | ||| ||||| || ||||||||||| Sbjct 9099 TTGCCTCCACGGAGACGCAAGACAAGGTGCAAAGTGCTCTCCTTCTGGATGTTGTAGTCC 9040 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGAT-CGGG 134602 | |||| || ||| || | ||| || |||||||| || | ||||||||| | | || Sbjct 9039 GAGAGGGTGCGACCGTCTTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCCAGG 8980 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662 || || | || || |||||||| || ||||| ||| | ||||| ||||| || Sbjct 8979 GGGAATATCCTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGACGACTC 8920 Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || || || || || | || || || || || ||||| Sbjct 8919 AACCTCGAGGGTGATCGTCTTTCCAGTGAGCGTCTTGACAAAGATCTGCAT 8869 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563 ||| ||||| || ||| ||||| || ||||||||||| || |||| || || || Sbjct 8850 CACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCATCTTC 8791 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 | ||| || |||||||| || | ||||||||| || || || ||||| || || || || Sbjct 8790 CAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTG 8731 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 ||| || ||||| ||| | ||||| || || || || || | || ||||| || Sbjct 8730 AATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACTTCCAATGTGATGGTCTT 8671 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || || || |||||||| Sbjct 8670 TCCTGTGAGTGTCTTGACAAAGATTTGCAT 8641 >seq33 Length=194022 Score = 122 bits (134), Expect = 9e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||||||| || || || ||||| || ||||||||||| | Sbjct 184341 CCACCACGGAGGCGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 184282 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || |||||||| || || || || || | |||||||||||| || || Sbjct 184281 AGGGTGCGTCCATCTTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCAGGGGGA 184222 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || ||||| ||| | ||||| || || ||||| Sbjct 184221 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACC 184162 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || || ||||| || || || | || ||||| || || ||||| || Sbjct 184161 TCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTAACAAAGATCTGCATCTT 184112 >seq62 Length=118391 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || ||||||||||| || |||||||| || || ||| | ||| |||||||| Sbjct 71208 TGAAGTGTGGATTCCTTCTGGATGTTGTAATCTGAAAGAGTGCGGCCGTCTTCGAGCTGC 71267 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 ||||| || || || | |||||||||||||| || |||||||| || || || || || Sbjct 71268 TTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCTTCCTTGTCCTGGATCTTG 71327 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||||| ||| | ||||| || || || || || ||||| ||||| || || || Sbjct 71328 GCCTTGACGTTGTCGATGGTGTCCGAAGACTCGACTTCAAGAGTGATGGTCTTGCCAGTC 71387 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || ||||| Sbjct 71388 AAAGTCTTGACAAAGATCTGCAT 71410 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || ||||| ||||| || ||||||||||| Sbjct 71412 CCACCGCGGAGACGGAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAG 71471 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || |||||||| || || ||||| || | ||||||||| || || || Sbjct 71472 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGTGGG 71531 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || ||||| || ||||| ||| | ||||| || || || || Sbjct 71532 ATACCCTCCTTATCCTGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACC 71591 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || ||||| | || || || || || ||||| Sbjct 71592 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 71638 >seq24 Length=214592 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || || || ||||| || ||||||||||| | Sbjct 73368 CCACCACGGAGACGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 73427 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| |||||||| || || || || || | ||||||||| ||||| || Sbjct 73428 AGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCGGGGGGG 73487 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || || || ||| | |||||||| || ||||| Sbjct 73488 ATACCCTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAAGACTCCACC 73547 Query 134667 TCGAGAGTAATGGTTTTACCGGTT 134690 || || || ||||| ||||| ||| Sbjct 73548 TCAAGGGTGATGGTCTTACCTGTT 73571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505317283556800