Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq144 138 1e-27
seq33 122 9e-23
seq62 118 1e-21
seq24 107 2e-18
>seq144
Length=29207
Score = 138 bits (152), Expect = 1e-27
Identities = 156/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
||||| || || || ||||| || || |||||||| ||| | |||| | ||| ||
Sbjct 8393 ACGAGATGGAGGGTCGATTCTTTCTGGATGTTGTAATCGGACAAGGTGCGGCCGTCCTCA 8334
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| || || || ||||| | ||||||||||||||| || |||||||| || || |||
Sbjct 8333 AGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGA 8274
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| || | ||||| ||||| || || |||||||||||||| ||
Sbjct 8273 ATCTTGGCCTTGACGTTATCGATAGTGTCAGACGACTCAACCTCGAGAGTAATGGTCTTG 8214
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || ||||| || |||||
Sbjct 8213 CCGGTCAAGGTCTTGACGAAGATCTGCAT 8185
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | |||||| | |||||||| |||||| |||||||||||||||||||||
Sbjct 8639 CCACCACGGAGTCGGAGAACGAGGTGAAGCGTGCTCTCCTTTTGAATGTTGTAGTCGGAG 8580
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | ||| || || || || || ||||| || | || |||||||| || ||
Sbjct 8579 AGTGTTCGGCCGTCCTCAAGTTGCTTTCCAGCAAAGATGAGGCGTTGCTGATCAGGTGGA 8520
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || || || || || || || ||| | || || || || || ||
Sbjct 8519 ATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTGTCGATGGTATCAGAAGACTCGACC 8460
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|||||||||||||| || || || | ||||| ||||| || |||||
Sbjct 8459 TCGAGAGTAATGGTCTTGCCTGTAAGGGTTTTGACGAAGATCTGCAT 8413
Score = 113 bits (124), Expect = 5e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576
||||| ||||| || ||||||||||| | ||| | || || | |||||| ||
Sbjct 8153 GTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCATCTTCCAACTGTTTACCA 8094
Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636
|| || || | ||||||||| ||||| || || || || || || |||||||| |||
Sbjct 8093 GCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATTTTGGCCTTG 8034
Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696
|| ||| | |||||||| || ||||| ||||| || ||||| |||||||| | |||
Sbjct 8033 ACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTACCGGTCAGAGTC 7974
Query 134697 TTAACGAAAATTTGCAT 134713
|| || || || |||||
Sbjct 7973 TTGACAAAGATCTGCAT 7957
Score = 102 bits (112), Expect = 8e-17
Identities = 162/231 (70%), Gaps = 1/231 (0%)
Strand=Plus/Minus
Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543
|| ||||| | ||| ||||| || ||||| | ||| ||||| || |||||||||||
Sbjct 9099 TTGCCTCCACGGAGACGCAAGACAAGGTGCAAAGTGCTCTCCTTCTGGATGTTGTAGTCC 9040
Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGAT-CGGG 134602
| |||| || ||| || | ||| || |||||||| || | ||||||||| | | ||
Sbjct 9039 GAGAGGGTGCGACCGTCTTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCCAGG 8980
Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662
|| || | || || |||||||| || ||||| ||| | ||||| ||||| ||
Sbjct 8979 GGGAATATCCTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGACGACTC 8920
Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||| || || || || || || | || || || || || |||||
Sbjct 8919 AACCTCGAGGGTGATCGTCTTTCCAGTGAGCGTCTTGACAAAGATCTGCAT 8869
Score = 100 bits (110), Expect = 3e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563
||| ||||| || ||| ||||| || ||||||||||| || |||| || || ||
Sbjct 8850 CACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCATCTTC 8791
Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623
| ||| || |||||||| || | ||||||||| || || || ||||| || || || ||
Sbjct 8790 CAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTG 8731
Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683
||| || ||||| ||| | ||||| || || || || || | || ||||| ||
Sbjct 8730 AATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACTTCCAATGTGATGGTCTT 8671
Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || | || || || || ||||||||
Sbjct 8670 TCCTGTGAGTGTCTTGACAAAGATTTGCAT 8641
>seq33
Length=194022
Score = 122 bits (134), Expect = 9e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||||||||| || || || ||||| || ||||||||||| |
Sbjct 184341 CCACCACGGAGGCGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 184282
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || |||||||| || || || || || | |||||||||||| || ||
Sbjct 184281 AGGGTGCGTCCATCTTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCAGGGGGA 184222
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || || || || || ||||| ||| | ||||| || || |||||
Sbjct 184221 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACC 184162
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|| || || ||||| || || || | || ||||| || || ||||| ||
Sbjct 184161 TCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTAACAAAGATCTGCATCTT 184112
>seq62
Length=118391
Score = 118 bits (130), Expect = 1e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
|| || ||||||||||| || |||||||| || || ||| | ||| ||||||||
Sbjct 71208 TGAAGTGTGGATTCCTTCTGGATGTTGTAATCTGAAAGAGTGCGGCCGTCTTCGAGCTGC 71267
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
||||| || || || | |||||||||||||| || |||||||| || || || || ||
Sbjct 71268 TTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCTTCCTTGTCCTGGATCTTG 71327
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
||||| ||| | ||||| || || || || || ||||| ||||| || || ||
Sbjct 71328 GCCTTGACGTTGTCGATGGTGTCCGAAGACTCGACTTCAAGAGTGATGGTCTTGCCAGTC 71387
Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || || |||||
Sbjct 71388 AAAGTCTTGACAAAGATCTGCAT 71410
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | |||||||| || ||||| ||||| || |||||||||||
Sbjct 71412 CCACCGCGGAGACGGAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAG 71471
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || |||||||| || || ||||| || | ||||||||| || || ||
Sbjct 71472 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGTGGG 71531
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || ||||| || ||||| ||| | ||||| || || || ||
Sbjct 71532 ATACCCTCCTTATCCTGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACC 71591
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| || ||||| | || || || || || |||||
Sbjct 71592 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 71638
>seq24
Length=214592
Score = 107 bits (118), Expect = 2e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | |||||||| || || || ||||| || ||||||||||| |
Sbjct 73368 CCACCACGGAGACGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 73427
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| |||||||| || || || || || | ||||||||| ||||| ||
Sbjct 73428 AGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCGGGGGGG 73487
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || || || || ||| | |||||||| || |||||
Sbjct 73488 ATACCCTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAAGACTCCACC 73547
Query 134667 TCGAGAGTAATGGTTTTACCGGTT 134690
|| || || ||||| ||||| |||
Sbjct 73548 TCAAGGGTGATGGTCTTACCTGTT 73571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505317283556800
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