Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq81 102 1e-16 seq69 98.7 1e-15 >seq81 Length=91273 Score = 102 bits (112), Expect = 1e-16 Identities = 511/810 (63%), Gaps = 8/810 (1%) Strand=Plus/Minus Query 69322 ATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTT 69381 || |||||||| || || || || ||||| || || || || | ||| || ||||| Sbjct 57129 ATGATCTCTGTGCAAAGGTTGGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGCTCTTG 57070 Query 69382 TTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATA 69441 ||| |||||||||||||| || || || ||||||| || |||| || |||| Sbjct 57069 CGGTTGGCAGCGTCCTTGTAAAGGATGAAGGGGTTACCAGTCTCGGTCTGGGACTCGAGG 57010 Query 69442 ATAGATTTCCAAACGACCCTAGCATTTATTACGGT---CTTGTAACGCTTCTCTTTTTCA 69498 || | | ||| | | ||| || | |||| |||| | || ||| || Sbjct 57009 ATGGCGTACCAGAGCTTCTGAGCCTTGA---CGGTGCGCTTGGAGCGACCCTCGGCCTCG 56953 Query 69499 TATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCA 69558 || | || || || || || || || || | ||| | | || ||||| || Sbjct 56952 TAGCGCTCGTAGAGACGCTCAAACTCCTCGCCGTAGCAGTCAGCGAGACCGGGACACTCG 56893 Query 69559 TTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGA 69618 || || ||||| | ||||| || | | | || || | ||||| || ||||||||| Sbjct 56892 TTAGGGCACATGAGCGACCAGTCACCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGA 56833 Query 69619 ATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttA 69678 | ||| || || ||||| || | || | || || || || || || Sbjct 56832 ACCCAGAGGGCGTAGAAGAGCTCACGGGCACGTACCTCCTCCTTACCGTGGTTCTTGCGG 56773 Query 69679 AGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCC 69738 || || || ||||| | | ||| || ||||| || || | || || || | | | || Sbjct 56772 AGGTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCAATGTAGATGGCAAAGGCACCG 56713 Query 69739 GGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATC 69798 || || || || || ||||| || | ||||| |||||||| || |||| | ||||| Sbjct 56712 GGACGCTTGTTACCACCCTGGTCAACGTATCGTGCAGTGTTGTTGAAGACACGGAGCATG 56653 Query 69799 GGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATA 69858 |||| ||||| || |||||| || || | ||| || || || | || || Sbjct 56652 GGAACGATACCGTTGCTGACACCATTGGTACCGGCAATGTAGGAGCCAGTTCCTCGGATG 56593 Query 69859 TTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAAT 69918 || || ||||| || || || || | || ||||| | || || || | Sbjct 56592 TTGTGGATGTTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGG 56533 Query 69919 GTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATT 69978 ||||| || ||||| || || ||||| ||||| | | ||| ||||| || | Sbjct 56532 GTGTCGTAGATACCGTCGATCGAGTCATCCTTCATGGTGACAAGGAAACACGACGAGAGC 56473 Query 69979 TGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCA 70038 || | || ||| || || || || | || || || ||||| ||||| | || | Sbjct 56472 TGGGGGTGGGGAGTACCAGCGTTGAAGAGGGTGGGGGAAGCGTGTGTGAAGAACTTCTGC 56413 Query 70039 GAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCC-CACTGATGAATTCCTATCGC 70097 || | |||||||| || || || || ||| || ||| | | | || || || | || Sbjct 56412 GACATGAGATTGTAGGTCTCGATGGCGCTTTCGATGTCCTCGCCG-TGGATACCAACAGC 56354 Query 70098 GACACGCATCAACATATGCTGAGGTCGTTC 70127 ||||||||| | ||| ||||| || || || Sbjct 56353 GACACGCATGAGCATGTGCTGGGGACGCTC 56324 >seq69 Length=107628 Score = 98.7 bits (108), Expect = 1e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 39614 AAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTG 39673 |||||||| ||||| || | ||||||||| | || | ||||| || || ||| Sbjct 12623 AAGCAGGCAAAGTCGGTGTGCATGCCCTCATCACGCGAGATGAGCTCGTTGGAGAAAGTG 12564 Query 39674 AGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAG 39733 || || ||||| ||||||||||| |||||||| || |||| ||| || || || || ||| Sbjct 12563 AGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAACGAACCGGAGAAG 12504 Query 39734 AAGATGCCTTCTACTGCTGCAAATGCAACAAG 39765 ||||| ||||| || || || || || || || Sbjct 12503 AAGATACCTTCGACGGCGGCGAAAGCGACGAG 12472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686798551137600