Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq144 100 2e-16 seq62 100 2e-16 seq33 95.1 1e-14 >seq144 Length=29207 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || ||||| || || ||||| ||| || | |||| |||| || ||||| || ||| Sbjct 8381 GTCGATTCTTTCTGGATGTTGTAATCGGACAAGGTGCGGCCGTCCTCAAGCTGCTTTCCG 8322 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| ||||||||||||| ||||| || || | || || || || |||||| || Sbjct 8321 GCGAAAATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTG 8262 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | |||||| | | ||||| || ||||| || | ||||| |||| || Sbjct 8261 ACGTTATCGATAGTGTCAGACGACTCAACCTCGAGAGTAATGGTCTTGCCGGTCAAGGTC 8202 Query 27231 TTCACAAAGATTTGCATA 27248 || || ||||| |||||| Sbjct 8201 TTGACGAAGATCTGCATA 8184 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || || || || || || || || |||||||| | | | || | ||||| Sbjct 8165 ACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCATCTTCC 8106 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | ||||||||| ||| | ||||||||||| || || || || | |||||| || || Sbjct 8105 AACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGA 8046 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || ||| || | | | || | ||||| | | || || || || || || | || Sbjct 8045 ATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTA 7986 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||||||| || |||||||| ||||| Sbjct 7985 CCGGTCAGAGTCTTGACAAAGATCTGCAT 7957 >seq62 Length=118391 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | || || || || || || ||||| || | |||| |||||||| Sbjct 71202 ACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAATCTGAAAGAGTGCGGCCGTCTTCG 71261 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || |||||| | ||||| ||||| ||||| || || | || || || || | Sbjct 71262 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCTTCCTTGTCCTGG 71321 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| || | | | || | ||||| | | || ||||| ||||| || | ||| Sbjct 71322 ATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCGACTTCAAGAGTGATGGTCTTG 71381 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| ||| || |||||||| |||||| Sbjct 71382 CCAGTCAAAGTCTTGACAAAGATCTGCATA 71411 >seq33 Length=194022 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || |||||||| | | |||| | ||||||||||| |||||| Sbjct 184311 GTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGTCCATCTTCGAGCTGCTTACCG 184252 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| ||||| || || | || || || || ||||||| || Sbjct 184251 GCGAAGATGAGACGCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTG 184192 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | || || || || || || | |||||||| || || Sbjct 184191 ACGTTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTC 184132 Query 27231 TTCACAAAGATTTGCAT 27247 || |||||||| ||||| Sbjct 184131 TTAACAAAGATCTGCAT 184115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424867903078080