Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq81 232 8e-56
seq82 109 7e-19
seq69 84.2 3e-11
>seq81
Length=91273
Score = 232 bits (256), Expect = 8e-56
Identities = 1111/1741 (64%), Gaps = 49/1741 (3%)
Strand=Plus/Minus
Query 110369 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTG 110428
||||| | ||||||||||| || | ||||| |||| | ||||| |||| |||||
Sbjct 58047 TAGTAGGTACCGGTCTTGAGACCCTTCTTCCAACCGTAGAAGTGCATCGAAGTGAGCT-- 57990
Query 110429 GAC--ATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTTGGTCAATGAA-GC 110483
||| | || || || | || ||| | ||| |||| || ||||| ||
Sbjct 57989 GACCGAAAGTAGGTGCCGACAAGTGGATGTTGAGCGACTGCGACT--GGCAGATGAAAGC 57932
Query 110484 GCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGAT 110543
|| | || | |||||||| || |||| | ||||| | || |||||||| || |
Sbjct 57931 ACCACGGTCG-GCCGCCATGTCGATGATAGCCTTCTGACTGATCTCCCAAACGGTCTTGT 57873
Query 110544 AGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCA 110603
|||| ||||||||| || |||||| | | | ||||| || ||||| || |
Sbjct 57872 AGAGCTTCTTGATACGGTCAGGGATACCGGGAACGTTCTGAATCGAACCACCG---TGAG 57816
Query 110604 CCATGAGA---TCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGA 110660
| |||| | | |||||| | | ||| ||||| || ||| ||| || |
Sbjct 57815 CGATGATACGGTTCTTCATGGTGTCGTTCCAAAGACCTTGCTCAACGAGCTCACGGAGCA 57756
Query 110661 GGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTG 110720
|||||| | |||||||| ||||| | | | ||||||||| | |
Sbjct 57755 ACCAAGGGTTGACGACCTGGAACTCACCAGCGAGTACACGGCGCGAGTAGATGTTCGAGG 57696
Query 110721 TGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTG 110780
|||| || || ||||| || || || | || || ||| ||||| || ||||| |
Sbjct 57695 TGTAAGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGACTGGTCGAGGCAGTAGGCATGG 57636
Query 110781 GTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCC 110840
| || | ||| || ||| |||||||| | || || ||||||| |||
Sbjct 57635 GAGCGAGCAAGAGCGAGTTGCGAAGACCGTGCTTGGCAATCTTGGCCTTGAGGCTGGCCC 57576
Query 110841 AGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACG 110900
|||| || | || | | | |||||||||| |||| ||| | || || || |
Sbjct 57575 AGTCCCAGAGGTCGGAGGGTGTAACACCCCACATGTCGTACTGGAGCTCACCCTGCGAAG 57516
Query 110901 CGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGC-TCGCC 110959
|||| ||||| | |||| || |||| || || | | || | || ||| ||||
Sbjct 57515 CGGGGGAACCGGCGTAGGTCTCGTAGGTGCCGTGCTCCTGGGCAAGCTCGCAGGATCGC- 57457
Query 110960 TCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCT 111019
|| || | ||||| || ||||| || ||||| || | || | ||| ||
Sbjct 57456 TCGAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGAACGTTGAGGCGGCGGGCCTCGGGC 57397
Query 111020 GAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCA 111079
|| ||||| ||||||| | || || | || || ||||| |||||||| | |||
Sbjct 57396 GACTCAAAAGCGTAGCCCATGATCATGAAGGCGTCAGCAAGACCCTGAACACCGATACCG 57337
Query 111080 ATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTG 111136
|| |||| ||| ||||| || ||||| || || ||| || || || | || ||
Sbjct 57336 ATGGGTCGGTGGCGCATGTTGGACTTGCGAGC---CTCGGGGACAGGGTAGTAGTTGATG 57280
Query 111137 TCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATG-AAGTTTTTCATA 111195
|| |||| ||| | |||||| | ||| | || || || ||| || | |
Sbjct 57279 TCGATGATCTTGTTCAAGTTTTTGCAGATGGCCTTGGCGACCTCGTGCAAGCGCTTGA-A 57221
Query 111196 ATC--AAAAGTGCGAGTCTCT-TCATTGACATACTTTGGAAGGGCGATTGATGCCAAATT 111252
|| | | | | | | || ||| | | || || ||||| || ||||| ||
Sbjct 57220 GTCGTAGACCTTGGTGACAGGGTCGATGA---AGGTGGGGAGAGCGATCGAAGCCAAGTT 57164
Query 111253 GCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACT 111312
||| ||||| |||||| | ||||||| | || ||||| || | |||||| |
Sbjct 57163 GCAGACAGCGACCTCATCGGGTGCACTGTACTCGATGATCTCTGTGCAAAGGTTGGAGCA 57104
Query 111313 CTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCAT 111372
||| || || || | ||||| ||||| ||||| |||| || |||||||| || ||
Sbjct 57103 CTTGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCGTCCTTGTAAAGGAT 57044
Query 111373 GTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTG 111431
| |||| | || ||||| ||||| || | ||| || || | ||| | | || | | ||
Sbjct 57043 GAAGGGGTTACCAGTCTCGGTCTGGGACTCGAGGATGGCGTACCAGAGCTTCTGAGCCTT 56984
Query 111432 GTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCT 111491
| || || |||| || ||||| |||||||| |||||| ||||||||||
Sbjct 56983 G-ACGGTGCGCTTGGAGCGACCCTCGGCCTCGTAGCGCTCGTAGAGACGCTCAAACTCCT 56925
Query 111492 CACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCAC 111551
| || ||| | |||||| || || || || || | || ||||| | |||
Sbjct 56924 CGCCGTAGCAGTCAGCGAGACCGGGACACTCGTTAGGGCACATGAGCGACCAGTCACCGT 56865
Query 111552 CTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTAC 111611
| ||| |||| ||||||||| || || |||| ||| |||| | ||||| || |
Sbjct 56864 TCTGCTCGACCCTCTTCATGAAGAGATCGGGAACCCAGAGGGCGTAGAAGAGCTCACGGG 56805
Query 111612 ACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGT 111671
|| |||| || | ||| ||||| || | ||||||||||| | || ||||| ||
Sbjct 56804 CACGTACCTCCTCCTTACCGTGGTTCTTGCGGAGGTCAAGGAACTCGAAGACATCCGAGT 56745
Query 111672 GCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTA 111725
|||| ||||||| |||| || | | || ||||| ||| | || | |
Sbjct 56744 GCCAAGGCTCAATGTAGATGGCAAAGGCACC---GGGACGCTTGTTACCACCCTGGTCAA 56688
Query 111726 CATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCAT--CTGATTGACC 111783
| || || || ||| ||| || || || ||||| |||| ||||| | |||| |||
Sbjct 56687 CGTATCGTGCAGTGTTGTTGAAGACACGGAGCATGGGAACGATACCGTTGCTGA--CACC 56630
Query 111784 ATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACC 111843
||| || || ||| || | | ||| | | ||||||| | || |||||
Sbjct 56629 ATTGGTACCGGCAATGTAGGAGCCAGTTCCTCGGATGTTGTGGATGTTGAGACCGATACC 56570
Query 111844 CCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGA 111903
||||| ||| ||||| || || | | || || | |||||||||| ||| ||
Sbjct 56569 ACCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTCGATCGA 56510
Query 111904 GTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATT 111963
||| ||||| ||| || |||||| || || | ||| || || |||||||| ||
Sbjct 56509 GTCATCCTTCATGGTGACAAGGAAACACGACGAGAGCTGGGGGTGGGGAGTACCAGCGTT 56450
Query 111964 GAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCA 112022
||||||||| || | ||||| |||| | || | || ||||| | ||| ||||| |
Sbjct 56449 GAAGAGGGTGGGGGAAGCGTGTGTGAAGA-ACTTCTGCGACATGAGATTGTAGGTCTCGA 56391
Query 112023 AGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTG 112082
| | || ||||| || |||||||| || | ||||| ||||||| ||||| ||| |
Sbjct 56390 TGGCGCTTTCGATGTCCTCGCCGTGGATACCAACAGCGACACGCATGAGCATGTGCTGGG 56331
Query 112083 G 112083
|
Sbjct 56330 G 56330
>seq82
Length=90256
Score = 109 bits (120), Expect = 7e-19
Identities = 262/388 (68%), Gaps = 14/388 (4%)
Strand=Plus/Plus
Query 182513 GATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACC 182572
|||||||||||||||||| |||||||| | ||| ||| ||||| ||||| | || ||
Sbjct 62462 GATGAGACCCTTGATGTGCGAACCATCGTGATCCTGATCGGTCATGATCATGATACTTCC 62521
Query 182573 ATAGCG-AAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAAGACCAAGGATCTTCT 182631
|| || ||| | | |||| |||| | || || || || ||||| || |||| ||
Sbjct 62522 GTATCGCAAGCTGTTGA-CATCGAGGTACTGCTTGCCGTGCTGGAGACCGAGAATCTCCT 62580
Query 182632 TGAGATCATTGAACTCCTGGTT--TGATGTAAGCTGTGCCACCGAAGCGTCCCGAACATT 182689
||| | |||| ||| || | ||| | ||| | | || || || || ||
Sbjct 62581 TGATGGCCTTGATCTCGGCATTCTTCATG--ATCTGATCGTGTGTGGCCTCGCGGACGTT 62638
Query 182690 CTTACATTTACCGCGAAGTGGGAACACACCGTAGTGATCACGACCAACGACAGAGAGACC 182749
| ||||| ||||| || || ||||| ||| ||||| || || ||| || |||
Sbjct 62639 GAGAAGCTTACCTCGAAGCGGAAAGACACCAAAGTTGTCACGCCCGACTTCAGCGATACC 62698
Query 182750 CGCAACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACACTTTCCAGA 182809
| || ||||| || || || || ||||| || |||| |||||| || || | ||
Sbjct 62699 GGAGACGGCGAGCGTCTTGGCGGAGTCACCTTCGGTGAGAATGAGCGTGCAGTCCTTAGC 62758
Query 182810 TTGTGCCGT-ACCCGCCTTGTTCGCGTCATCCAACTTGGGAATACCGGTAATTTTGGA-- 182866
|| ||| ||| || ||||| || || || | ||||||||| |||||| |||
Sbjct 62759 TT-TGCGACCACCAGCGTTGTTGGCATCTTCGAGCTTGGGAATGTTCGTAATTCTGGTTC 62817
Query 182867 -CTTGCGAGCACCATCGGTCTTCTTGAG 182893
|||| || || ||||||||||||||
Sbjct 62818 GCTTGTGA---CCGTCGGTCTTCTTGAG 62842
>seq69
Length=107628
Score = 84.2 bits (92), Expect = 3e-11
Identities = 114/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717
|||||| || ||| | |||||||| || || || || || || ||||| |||||
Sbjct 12618 GGCAAAGTCGGTGTGCATGCCCTCATCACGCGAGATGAGCTCGTTGGAGAAAGTGAGACC 12559
Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777
||||||||||| |||||||| | ||| | || | ||| || ||||||||||||||
Sbjct 12558 GGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAACGAACCGGAGAAGAAGAT 12499
Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAA 122816
||| || || || || || | || |||||||| ||
Sbjct 12498 ACCTTCGACGGCGGCGAAAGCGACGAGACGTTCGGCAAA 12460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627931200864000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |