Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq81 232 8e-56 seq82 109 7e-19 seq69 84.2 3e-11 >seq81 Length=91273 Score = 232 bits (256), Expect = 8e-56 Identities = 1111/1741 (64%), Gaps = 49/1741 (3%) Strand=Plus/Minus Query 110369 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTG 110428 ||||| | ||||||||||| || | ||||| |||| | ||||| |||| ||||| Sbjct 58047 TAGTAGGTACCGGTCTTGAGACCCTTCTTCCAACCGTAGAAGTGCATCGAAGTGAGCT-- 57990 Query 110429 GAC--ATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTTGGTCAATGAA-GC 110483 ||| | || || || | || ||| | ||| |||| || ||||| || Sbjct 57989 GACCGAAAGTAGGTGCCGACAAGTGGATGTTGAGCGACTGCGACT--GGCAGATGAAAGC 57932 Query 110484 GCCCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGAT 110543 || | || | |||||||| || |||| | ||||| | || |||||||| || | Sbjct 57931 ACCACGGTCG-GCCGCCATGTCGATGATAGCCTTCTGACTGATCTCCCAAACGGTCTTGT 57873 Query 110544 AGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCA 110603 |||| ||||||||| || |||||| | | | ||||| || ||||| || | Sbjct 57872 AGAGCTTCTTGATACGGTCAGGGATACCGGGAACGTTCTGAATCGAACCACCG---TGAG 57816 Query 110604 CCATGAGA---TCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGA 110660 | |||| | | |||||| | | ||| ||||| || ||| ||| || | Sbjct 57815 CGATGATACGGTTCTTCATGGTGTCGTTCCAAAGACCTTGCTCAACGAGCTCACGGAGCA 57756 Query 110661 GGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTG 110720 |||||| | |||||||| ||||| | | | ||||||||| | | Sbjct 57755 ACCAAGGGTTGACGACCTGGAACTCACCAGCGAGTACACGGCGCGAGTAGATGTTCGAGG 57696 Query 110721 TGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTG 110780 |||| || || ||||| || || || | || || ||| ||||| || ||||| | Sbjct 57695 TGTAAGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGACTGGTCGAGGCAGTAGGCATGG 57636 Query 110781 GTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCC 110840 | || | ||| || ||| |||||||| | || || ||||||| ||| Sbjct 57635 GAGCGAGCAAGAGCGAGTTGCGAAGACCGTGCTTGGCAATCTTGGCCTTGAGGCTGGCCC 57576 Query 110841 AGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACG 110900 |||| || | || | | | |||||||||| |||| ||| | || || || | Sbjct 57575 AGTCCCAGAGGTCGGAGGGTGTAACACCCCACATGTCGTACTGGAGCTCACCCTGCGAAG 57516 Query 110901 CGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGC-TCGCC 110959 |||| ||||| | |||| || |||| || || | | || | || ||| |||| Sbjct 57515 CGGGGGAACCGGCGTAGGTCTCGTAGGTGCCGTGCTCCTGGGCAAGCTCGCAGGATCGC- 57457 Query 110960 TCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCT 111019 || || | ||||| || ||||| || ||||| || | || | ||| || Sbjct 57456 TCGAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGAACGTTGAGGCGGCGGGCCTCGGGC 57397 Query 111020 GAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCA 111079 || ||||| ||||||| | || || | || || ||||| |||||||| | ||| Sbjct 57396 GACTCAAAAGCGTAGCCCATGATCATGAAGGCGTCAGCAAGACCCTGAACACCGATACCG 57337 Query 111080 ATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTG 111136 || |||| ||| ||||| || ||||| || || ||| || || || | || || Sbjct 57336 ATGGGTCGGTGGCGCATGTTGGACTTGCGAGC---CTCGGGGACAGGGTAGTAGTTGATG 57280 Query 111137 TCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATG-AAGTTTTTCATA 111195 || |||| ||| | |||||| | ||| | || || || ||| || | | Sbjct 57279 TCGATGATCTTGTTCAAGTTTTTGCAGATGGCCTTGGCGACCTCGTGCAAGCGCTTGA-A 57221 Query 111196 ATC--AAAAGTGCGAGTCTCT-TCATTGACATACTTTGGAAGGGCGATTGATGCCAAATT 111252 || | | | | | | || ||| | | || || ||||| || ||||| || Sbjct 57220 GTCGTAGACCTTGGTGACAGGGTCGATGA---AGGTGGGGAGAGCGATCGAAGCCAAGTT 57164 Query 111253 GCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACT 111312 ||| ||||| |||||| | ||||||| | || ||||| || | |||||| | Sbjct 57163 GCAGACAGCGACCTCATCGGGTGCACTGTACTCGATGATCTCTGTGCAAAGGTTGGAGCA 57104 Query 111313 CTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCAT 111372 ||| || || || | ||||| ||||| ||||| |||| || |||||||| || || Sbjct 57103 CTTGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCGTCCTTGTAAAGGAT 57044 Query 111373 GTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTG 111431 | |||| | || ||||| ||||| || | ||| || || | ||| | | || | | || Sbjct 57043 GAAGGGGTTACCAGTCTCGGTCTGGGACTCGAGGATGGCGTACCAGAGCTTCTGAGCCTT 56984 Query 111432 GTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCT 111491 | || || |||| || ||||| |||||||| |||||| |||||||||| Sbjct 56983 G-ACGGTGCGCTTGGAGCGACCCTCGGCCTCGTAGCGCTCGTAGAGACGCTCAAACTCCT 56925 Query 111492 CACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCAC 111551 | || ||| | |||||| || || || || || | || ||||| | ||| Sbjct 56924 CGCCGTAGCAGTCAGCGAGACCGGGACACTCGTTAGGGCACATGAGCGACCAGTCACCGT 56865 Query 111552 CTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTAC 111611 | ||| |||| ||||||||| || || |||| ||| |||| | ||||| || | Sbjct 56864 TCTGCTCGACCCTCTTCATGAAGAGATCGGGAACCCAGAGGGCGTAGAAGAGCTCACGGG 56805 Query 111612 ACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGT 111671 || |||| || | ||| ||||| || | ||||||||||| | || ||||| || Sbjct 56804 CACGTACCTCCTCCTTACCGTGGTTCTTGCGGAGGTCAAGGAACTCGAAGACATCCGAGT 56745 Query 111672 GCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTA 111725 |||| ||||||| |||| || | | || ||||| ||| | || | | Sbjct 56744 GCCAAGGCTCAATGTAGATGGCAAAGGCACC---GGGACGCTTGTTACCACCCTGGTCAA 56688 Query 111726 CATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCAT--CTGATTGACC 111783 | || || || ||| ||| || || || ||||| |||| ||||| | |||| ||| Sbjct 56687 CGTATCGTGCAGTGTTGTTGAAGACACGGAGCATGGGAACGATACCGTTGCTGA--CACC 56630 Query 111784 ATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACC 111843 ||| || || ||| || | | ||| | | ||||||| | || ||||| Sbjct 56629 ATTGGTACCGGCAATGTAGGAGCCAGTTCCTCGGATGTTGTGGATGTTGAGACCGATACC 56570 Query 111844 CCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGA 111903 ||||| ||| ||||| || || | | || || | |||||||||| ||| || Sbjct 56569 ACCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTCGATCGA 56510 Query 111904 GTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATT 111963 ||| ||||| ||| || |||||| || || | ||| || || |||||||| || Sbjct 56509 GTCATCCTTCATGGTGACAAGGAAACACGACGAGAGCTGGGGGTGGGGAGTACCAGCGTT 56450 Query 111964 GAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCA 112022 ||||||||| || | ||||| |||| | || | || ||||| | ||| ||||| | Sbjct 56449 GAAGAGGGTGGGGGAAGCGTGTGTGAAGA-ACTTCTGCGACATGAGATTGTAGGTCTCGA 56391 Query 112023 AGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTG 112082 | | || ||||| || |||||||| || | ||||| ||||||| ||||| ||| | Sbjct 56390 TGGCGCTTTCGATGTCCTCGCCGTGGATACCAACAGCGACACGCATGAGCATGTGCTGGG 56331 Query 112083 G 112083 | Sbjct 56330 G 56330 >seq82 Length=90256 Score = 109 bits (120), Expect = 7e-19 Identities = 262/388 (68%), Gaps = 14/388 (4%) Strand=Plus/Plus Query 182513 GATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACC 182572 |||||||||||||||||| |||||||| | ||| ||| ||||| ||||| | || || Sbjct 62462 GATGAGACCCTTGATGTGCGAACCATCGTGATCCTGATCGGTCATGATCATGATACTTCC 62521 Query 182573 ATAGCG-AAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAAGACCAAGGATCTTCT 182631 || || ||| | | |||| |||| | || || || || ||||| || |||| || Sbjct 62522 GTATCGCAAGCTGTTGA-CATCGAGGTACTGCTTGCCGTGCTGGAGACCGAGAATCTCCT 62580 Query 182632 TGAGATCATTGAACTCCTGGTT--TGATGTAAGCTGTGCCACCGAAGCGTCCCGAACATT 182689 ||| | |||| ||| || | ||| | ||| | | || || || || || Sbjct 62581 TGATGGCCTTGATCTCGGCATTCTTCATG--ATCTGATCGTGTGTGGCCTCGCGGACGTT 62638 Query 182690 CTTACATTTACCGCGAAGTGGGAACACACCGTAGTGATCACGACCAACGACAGAGAGACC 182749 | ||||| ||||| || || ||||| ||| ||||| || || ||| || ||| Sbjct 62639 GAGAAGCTTACCTCGAAGCGGAAAGACACCAAAGTTGTCACGCCCGACTTCAGCGATACC 62698 Query 182750 CGCAACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACACTTTCCAGA 182809 | || ||||| || || || || ||||| || |||| |||||| || || | || Sbjct 62699 GGAGACGGCGAGCGTCTTGGCGGAGTCACCTTCGGTGAGAATGAGCGTGCAGTCCTTAGC 62758 Query 182810 TTGTGCCGT-ACCCGCCTTGTTCGCGTCATCCAACTTGGGAATACCGGTAATTTTGGA-- 182866 || ||| ||| || ||||| || || || | ||||||||| |||||| ||| Sbjct 62759 TT-TGCGACCACCAGCGTTGTTGGCATCTTCGAGCTTGGGAATGTTCGTAATTCTGGTTC 62817 Query 182867 -CTTGCGAGCACCATCGGTCTTCTTGAG 182893 |||| || || |||||||||||||| Sbjct 62818 GCTTGTGA---CCGTCGGTCTTCTTGAG 62842 >seq69 Length=107628 Score = 84.2 bits (92), Expect = 3e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| | |||||||| || || || || || || ||||| ||||| Sbjct 12618 GGCAAAGTCGGTGTGCATGCCCTCATCACGCGAGATGAGCTCGTTGGAGAAAGTGAGACC 12559 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777 ||||||||||| |||||||| | ||| | || | ||| || |||||||||||||| Sbjct 12558 GGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAACGAACCGGAGAAGAAGAT 12499 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAA 122816 ||| || || || || || | || |||||||| || Sbjct 12498 ACCTTCGACGGCGGCGAAAGCGACGAGACGTTCGGCAAA 12460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627931200864000