Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq81 215 6e-51
seq69 132 6e-26
seq82 127 3e-24
>seq81
Length=91273
Score = 215 bits (238), Expect = 6e-51
Identities = 569/861 (66%), Gaps = 11/861 (1%)
Strand=Plus/Minus
Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763
|| || ||||| || |||| || || |||| | |||||| || ||||||| ||
Sbjct 57186 GGGAGAGCGATCGAAGCCAAGTTGCAGACAGCGACCTCATCGGGTGCACTGTACTCGATG 57127
Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823
|| || ||||| | ||| || | ||| ||||| || | |||||| || || ||| |
Sbjct 57126 ATCTCTGTGCAAAGGTTGGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGG 57067
Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883
|| || ||||||||||| ||| | || | || ||||| || ||||||| ||| ||
Sbjct 57066 TTGGCAGCGTCCTTGTAAAGGATGAAGGGGTTACCAGTCTCGGTCTGGGACTCGAGGATG 57007
Query 118884 GCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTT 118942
|| | ||||| | || | ||| || ||| |||| || ||||| |||||||
Sbjct 57006 GCGTACCAGAGCTTCTG-AGCCTTGACGGTGCGCTTGGAGCGACCCTCGGCCTCGTAGCG 56948
Query 118943 TGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGG 119002
|||||| |||||||| || || | || | ||| || || || | ||
Sbjct 56947 CTCGTAGAGACGCTCAAACTCCTCGCCGTAGCAGTCAGCGAGACCGGGACACTCGTTAGG 56888
Query 119003 GCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 119062
||| | ||| ||||| | ||| || ||| |||| |||||||||||| || || | |||
Sbjct 56887 GCACATGAGCGACCAGTCACCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGAACCCA 56828
Query 119063 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 119122
||| || ||||||| || || || | || || | || || || || | ||
Sbjct 56827 GAGGGCGTAGAAGAGCTCACGGGCACGTACCTCCTCCTTACCGTGGTTCTTGCGGAGGTC 56768
Query 119123 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG 119182
| || || | || ||||| |||||| || || | ||| | || | | || |||
Sbjct 56767 AAGGAACTCGAAGACATCCGAGTGCCAAGGCTCAATGTAGATGGCAAAGGCACCGGGACG 56708
Query 119183 ---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAAT 119239
|||| |||||| || || | |||||| ||| || ||||| ||||| ||||
Sbjct 56707 CTTGTTACCACCCTGGTCAACGTATCGTGCAGTGTTGTTGAAGACACGGAGCATGGGAAC 56648
Query 119240 GATACCATCGGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCG 119297
|||||| | | ||||| || || || || ||| | | | ||| || | |
Sbjct 56647 GATACCGTTGCTGACACCATTGGTACCGGCAATGTAGGAGCC--AGTTCCTCGGATGTTG 56590
Query 119298 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTG 119357
||||||| | ||| ||||| || || ||| ||||| ||||| | |||| ||
Sbjct 56589 TGGATGTTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTG 56530
Query 119358 CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGA 119417
||||||| || |||||||||||| |||| | | || ||||| || ||| | ||
Sbjct 56529 TCGTAGATACCGTCGATCGAGTCATCCTTCATGGTGACAAGGAAACACGACGAGAGCTGG 56470
Query 119418 GGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGA 119476
|| ||| ||||||||||||||||| || || | ||||| |||| | || | || ||
Sbjct 56469 GGGTGGGGAGTACCAGCGTTGAAGAGGGTGGGGGAAGCGTGTGTGAAGA-ACTTCTGCGA 56411
Query 119477 CATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGAC 119536
||| | ||||||||| | | || ||||| || ||||| ||||| | | |||
Sbjct 56410 CATGAGATTGTAGGTCTCGATGGCGCTTTCGATGTCCTCGCCGTGGATACCAACAGCGAC 56351
Query 119537 CCGCATAAACATGTATTGGGG 119557
||||| | ||||| |||||
Sbjct 56350 ACGCATGAGCATGTGCTGGGG 56330
>seq69
Length=107628
Score = 132 bits (146), Expect = 6e-26
Identities = 280/416 (67%), Gaps = 4/416 (1%)
Strand=Plus/Minus
Query 129760 CTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAATGGGTTCTTTGAGTTCCAAATTG- 129818
||| || | |||||||||||| |||||||| || || |||||||||||| ||| | ||
Sbjct 12873 CTTTCCTTGCAAGCTGATATTATCCATAAAGTCGAAGGGGTTCTTTGAG--CCATAGTGG 12816
Query 129819 -CTGGCACTCCAATCTGTTTGAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATC 129877
| || ||| | ||| |||| | || || | |||||||||||||| ||||
Sbjct 12815 ACCGGGTTTCCGAGCTGCGTGAGCAATCGGTCGGCCACGTACTCAATGTAGGTGCACATG 12756
Query 129878 TTCTCGGAGTTCATACCGATGAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCA 129937
|| || |||||| || ||||| | || | || || | ||| | ||||||
Sbjct 12755 AGCTTGGCGTTCATGCCAATGAGCGAAACGGGCAATGCATCGGTCAAGAAGCTCTTCTCG 12696
Query 129938 ATGTCCACAGCTTCCCGCACGATGGCGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAA 129997
|| || ||||| || | || | ||| |||||| | ||| | || | |
Sbjct 12695 ATCTCTACAGCCTCGGAAATAATCTTGAGAACGGTCTCGGGAGCAGCGCGCTTCTTGAGA 12636
Query 129998 GTCTTGAAGAGTTCCACGGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCA 130057
| |||||| |||||| || ||| | ||||| ||||| |||||||| ||
Sbjct 12635 TGCGAGAAGAGCAAGCAGGCAAAGTCGGTGTGCATGCCCTCATCACGCGAGATGAGCTCG 12576
Query 130058 TTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAAT 130117
|| ||||| ||||| ||||||||||| |||||||| | |||||| || | | ||
Sbjct 12575 TTGGAGAAAGTGAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAC 12516
Query 130118 GAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA 130173
|| || ||||||||||| || || || ||||| || | |||||| || |||||
Sbjct 12515 GAACCGGAGAAGAAGATACCTTCGACGGCGGCGAAAGCGACGAGACGTTCGGCAAA 12460
>seq82
Length=90256
Score = 127 bits (140), Expect = 3e-24
Identities = 298/443 (67%), Gaps = 10/443 (2%)
Strand=Plus/Plus
Query 179733 CTTGAGGAGCGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTGTGA 179792
|||||| ||||| || |||||| | || | |||| |||||||||||| ||||| ||
Sbjct 62423 CTTGAGCAGCGAAGGGTAGAAGTGATCGAGGAAGTTGATGATGAGACCCTTGATGTGCGA 62482
Query 179793 ACCATCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCG-AAGCTCGGAAACAT 179851
|||||||| |||| ||| ||||| ||||| | | || || || ||||| | ||||
Sbjct 62483 ACCATCGTGATCCTGATCGGTCATGATCATGATACTTCCGTATCGCAAGCT-GTTGACAT 62541
Query 179852 CTTGATAATCCTTACCTTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGT 179911
| | || | ||| || || || ||||| | |||| ||||| | |||| ||| |
Sbjct 62542 CGAGGTACTGCTTGCCGTGCTGGAGACCGAGAATCTCCTTGATGGCCTTGATCTCGGCAT 62601
Query 179912 TTGATGTGAGTTGCGCCACTGAAGCATCTCGGACATTTTTACACTTCCCACGGAGAGGGA 179971
| ||| || | || || || ||||| || | ||| || || || || |
Sbjct 62602 TCTTCATGATCTGATCGTGTGTGGCCTCGCGGACGTTGAGAAGCTTACCTCGAAGCGGAA 62661
Query 179972 ACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGG 180031
| ||||| ||| ||||| || || ||| || ||| | || ||||| ||||| ||||
Sbjct 62662 AGACACCAAAGTTGTCACGCCCGACTTCAGCGATACCGGAGACGGCGAGCGTCTTGGCGG 62721
Query 180032 AATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGCCGTC-CCTGCCTTGTTC 180090
| ||||| || || | |||||||| || | || || ||| | || || |||||
Sbjct 62722 AGTCACCTTCGGTGAGAATGAGCGTGCAGTCCTTAGCTT-TGCGACCACCAGCGTTGTTG 62780
Query 180091 GCGTCGTCCAACTTGGGAATACCAGTAATTTTGG---ACTTACGAGCGCCATCTGTCTTC 180147
|| || || | ||||||||| |||||| ||| ||| || || || ||||||
Sbjct 62781 GCATCTTCGAGCTTGGGAATGTTCGTAATTCTGGTTCGCTTGTGA---CCGTCGGTCTTC 62837
Query 180148 TTGAGTTCCTTCATCTCCTTGAA 180170
||||| ||| || ||||||
Sbjct 62838 TTGAGGGCCTGGTCCTGCTTGAA 62860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618335941150400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |