Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq81 295 8e-75 seq82 143 3e-29 seq69 118 1e-21 >seq81 Length=91273 Score = 295 bits (326), Expect = 8e-75 Identities = 1130/1739 (65%), Gaps = 63/1739 (4%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| ||||||| || || | ||||| || || || ||||| || | | Sbjct 56330 CCCCAGCACATGCTCATGCGTGTCGCTGTTGGTATCCACGGCGAGGACATCGAAAGCGCC 56389 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||| | ||||| || | || | |||| ||||| | || |||||||| Sbjct 56390 ATCGAGACCTACAATCTCATGTCGCAGAAGT-TCTTCACACACGCTTCCCCCACCCTCTT 56448 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| |||||||| || ||||| | || || |||||| || ||| ||||| || Sbjct 56449 CAACGCTGGTACTCCCCACCCCCAGCTCTCGTCGTGTTTCCTTGTCACCATGAAGGATGA 56508 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 ||| ||| |||||||||| | || || | | || || ||||| ||| ||||| Sbjct 56509 CTCGATCGACGGTATCTACGACACCCTCAAGACCTGCGCCATGATCTCCAAGACCGCTGG 56568 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 ||||| || | ||||||| | | ||| | | || ||| || || || Sbjct 56569 TGGTATCGGTCTCAACATCCACAACATCCGAGGAACTGGCTCCTACATTGCCGGTACCAA 56628 Query 104521 TGGTCAATCAG--ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 |||| |||| | ||||| |||| ||||| || || || ||| ||| || || || Sbjct 56629 TGGTG--TCAGCAACGGTATCGTTCCCATGCTCCGTGTCTTCAACAACACTGCACGATAC 56686 Query 104579 GTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 104632 || | || | ||| ||||| || | | || |||| ||||||| ||| Sbjct 56687 GTTGACCAGGGTGGTAACAAGCGTCCC---GGTGCCTTTGCCATCTACATTGAGCCTTGG 56743 Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGG 104692 ||| ||||| || | ||||||||||| | || ||||| ||| | ||||||| || Sbjct 56744 CACTCGGATGTCTTCGAGTTCCTTGACCTCCGCAAGAACCACGGTAAGGAGGAGGTACGT 56803 Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752 ||| || ||||||| ||| |||||| |||| ||||||||||||||||| || ||| || Sbjct 56804 GCCCGTGAGCTCTTCTACGCCCTCTGGGTTCCCGATCTCTTCATGAAGAGGGTCGAGCAG 56863 Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812 | || | ||||| ||| | || || || || || |||||| | || | || Sbjct 56864 AACGGTGACTGGTCGCTCATGTGCCCTAACGAGTGTCCCGGTCTCGCTGACTGCTACGGC 56923 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCG-ACGGT 104871 ||||||||||| || ||| ||||||| || ||||| | | ||| || || Sbjct 56924 GAGGAGTTTGAGCGTCTCTACGAGCGCTACGAGGCCGAGGGTCGCTCCAA-GCGCACCGT 56982 Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 ||| | || | | ||| | || || ||| |||| || ||||||||||||| || | Sbjct 56983 CAAGGCT-CAGAAGCTCTGGTACGCCATCCTCGAGTCCCAGACCGAGACTGGTAACCCCT 57041 Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 ||| |||||||| ||||| |||| ||||| || || ||||| | ||| |||| Sbjct 57042 TCATCCTTTACAAGGACGCTGCCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATCA 57101 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAG-ACA-AAGATGAGACGGCTGT 105048 || | ||||| || || ||||| ||| | || ||||| || |||||| ||||| Sbjct 57102 AGTGCTCCAACCTTTGCACAGAGATCATCGA--GTACAGTGCACCCGATGAGGTCGCTGT 57159 Query 105049 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGA 105108 || ||| | || || ||||||||||||| | | || || | || ||| | || Sbjct 57160 CTGCAACTTGGCTTCGATCGCTCTCCCCACCTTCATCGACCCTGTCACCAAGGTCTACGA 57219 Query 105109 TTATGAAAAAC-TCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTG 105167 | | || | | ||||| || | || | || ||||||| | |||| | || | Sbjct 57220 CT-TCAAGCGCTTGCACGAGGTCGCCAAGGCCATCTGCAAAAACTTGAACAAGATCATCG 57278 Query 105168 ATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 105224 | | || | ||||| || ||| ||||| || || || ||| | ||||| || | Sbjct 57279 ACATCAACTACTACCCTGTCCCCGAG---GCTCGCAAGTCCAACATGCGCCACCGACCCA 57335 Query 105225 TTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT--TCTTTGTCGCCACGCATTTGA 105282 | ||| |||||||||||||||| || || | ||||| || | | || |||| ||||| Sbjct 57336 TCGGTATCGGTGTTCAGGGTCTTGCTGACGCCTTCATGATCATGG--GCTACGCTTTTGA 57393 Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342 || ||| || |||| | | || || |||||||| || ||||| ||||| Sbjct 57394 GTCGCCCGAGGCCCGCCGCCTCAACGTTCAGATCTTCGAGACCATCTACCACGCTGCTCT 57453 Query 105343 TGAGGCGA-GTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTC 105401 || |||| | ||| | || ||| | || | || || |||| | ||||| | Sbjct 57454 CGA-GCGATCCTGCGAGCTTGCCCAGGAGCACGGCACCTACGAGACCTACGCCGGTTCCC 57512 Query 105402 CAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTAC 105460 | ||||| || || | ||| || | || ||||||| || | ||| | | || Sbjct 57513 CCGCTTCGCAGGGTGAGCTCCAGTACGACATGTGGG-GTGTTACACCCTCCGACCTCTGG 57571 Query 105461 GACTGGG-AAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCAT 105519 ||||||| ||| ||||||| || || | |||||||| ||| ||| | | Sbjct 57572 GACTGGGCCAGC-CTCAAGGCCAAGATTGCCAAGCACGGTCTTCGCAACTCGCTCTTGCT 57630 Query 105520 GGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 105579 ||||| ||||| || ||||| ||| || || | || || || ||||| || || Sbjct 57631 CGCTCCCATGCCTACTGCCTCGACCAGTCAGATTCTCGGCTTCAACGAGTGCTTCGAGCC 57690 Query 105580 CTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAA 105639 ||||| |||||||||| | | | ||||| || ||||| | | |||||| Sbjct 57691 TTACACCTCGAACATCTACTCGCGCCGTGTACTCGCTGGTGAGTTCCAGGTCGTCAAC-- 57748 Query 105640 GCATCTCGTGG----ATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA-- 105693 | | | || | ||| ||| ||| ||||| ||| | | |||||| | Sbjct 57749 -CCT-TGGTTGCTCCGTGAGCTCGTTGAGCAAGGTCTTTGGAACGACACCATGAAGAACC 57806 Query 105694 -TCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTA 105752 | |||| | | |||||||| ||||| || || | ||| || | || | Sbjct 57807 GTATCATCGCTCA---CGGTGGTTCGATTCAGAACGTTCCCGGTATCCCTGACCGTATCA 57863 Query 105753 AGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAG 105812 ||||| | ||| || |||||||| |||| ||||| | |||| |||||||| || | Sbjct 57864 AGAAGCTCTACAAGACCGTTTGGGAGATCAGTCAGAAGGCTATCATCGACATGGCGGCCG 57923 Query 105813 ATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAAC 105870 | |||||| ||||| | |||| ||| | || || | || || || Sbjct 57924 ACCGTGGTGCTTTCAT--CTGCCAGTCGCAGTCGCTCAACATCCACTTGTCGGCACCTAC 57981 Query 105871 GAT--GTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGG 105927 | ||| ||||| |||| |||||| | ||| ||||||||||||||||||| || || Sbjct 57982 TTTCGGTC--AGCTCACTTCGATGCACTTCTACGGTTGGAAGAAGGGTCTCAAGACCGG 58038 >seq82 Length=90256 Score = 143 bits (158), Expect = 3e-29 Identities = 256/365 (70%), Gaps = 14/365 (4%) Strand=Plus/Plus Query 169160 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 169219 |||| ||||||||||||||||| ||||| |||| ||| ||| ||||||||||||| | Sbjct 62457 TTGATGATGAGACCCTTGATGTGCGAACCATCGTGATCCTGATCGGTCATGATCATGATA 62516 Query 169220 CGACCATACCG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGAT 169278 | || || || ||||| | ||||| | || | ||| || || || ||||| | || Sbjct 62517 CTTCCGTATCGCAAGCT-GTTGACATCGAGGTACTGCTTGCCGTGCTGGAGACCGAGAAT 62575 Query 169279 CTTCTTGAGATCGTTGAACTC----TTGGT-TTGATGTGAGCTGTGTGACAGAGGCATCG 169333 || ||||| | |||| ||| || | |||| ||| | |||| | ||| ||| Sbjct 62576 CTCCTTGATGGCCTTGATCTCGGCATTCTTCATGATCTGATC-GTGT----GTGGCCTCG 62630 Query 169334 CGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACG 169393 || || || | ||| || ||||| || |||||||| ||| ||||| || || | Sbjct 62631 CGGACGTTGAGAAGCTTACCTCGAAGCGGAAAGACACCAAAGTTGTCACGCCCGACTTCA 62690 Query 169394 GAGAGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACAT 169453 | || ||| | ||| ||||| ||||| || |||||||| ||||||| |||||||| || Sbjct 62691 GCGATACCGGAGACGGCGAGCGTCTTGGCGGAGTCACCTTCGGTGAGAATGAGCGTGCAG 62750 Query 169454 TTTCCAGATTGTGC-CGTACCCGCCTTGTTCGCATCATCCAATTTGGGAATACCAGTAAT 169512 | || || ||| ||| || ||||| ||||| || | |||||||| ||||| Sbjct 62751 TCCTTAGCTT-TGCGACCACCAGCGTTGTTGGCATCTTCGAGCTTGGGAATGTTCGTAAT 62809 Query 169513 TTTGG 169517 | ||| Sbjct 62810 TCTGG 62814 >seq69 Length=107628 Score = 118 bits (130), Expect = 1e-21 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 94798 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 94857 ||||| || || ||| |||| || || || || |||||||||||||| ||||| ||| Sbjct 12460 TTTGCCGAACGTCTCGTCGCTTTCGCCGCCGTCGAAGGTATCTTCTTCTCCGGTTCGTTC 12519 Query 94858 TGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAG 94917 | || | |||||||||||||| ||||||||||| |||||| |||||||||||| Sbjct 12520 GCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACTTTCTCCAACGAG 12579 Query 94918 CTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 || ||||| ||||| ||||| | ||| || ||||| Sbjct 12580 CTCATCTCGCGTGATGAGGGCATGCACACCGACTTTGC 12617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583167186641600