Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq144 185 3e-41 seq107 179 1e-39 seq62 147 7e-30 seq33 132 1e-25 seq11049 93.3 1e-13 seq24 93.3 1e-13 >seq144 Length=29207 Score = 185 bits (204), Expect = 3e-41 Identities = 182/235 (77%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | || ||||| || ||||| || ||| |||||||| || | Sbjct 8647 TTTGCATACCACCACGGAGTCGGAGAACGAGGTGAAGCGTGCTCTCCTTTTGAATGTTGT 8588 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | |||||| || || |||||||| |||||||||||||| || |||||||||| Sbjct 8587 AGTCGGAGAGTGTTCGGCCGTCCTCAAGTTGCTTTCCAGCAAAGATGAGGCGTTGCTGAT 8528 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| ||||| ||||| || ||||| || || || ||||| || || || | |||||| | Sbjct 8527 CAGGTGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTGTCGATGGTATCAGAAG 8468 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || |||| ||||| || || || ||||| || || |||||||| Sbjct 8467 ACTCGACCTCGAGAGTAATGGTCTTGCCTGTAAGGGTTTTGACGAAGATCTGCAT 8413 Score = 159 bits (176), Expect = 1e-33 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||| ||||| || || || ||||| || || || ||||| Sbjct 8415 CATACCACCACGAAGACGGAGAACGAGATGGAGGGTCGATTCTTTCTGGATGTTGTAATC 8356 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || || || || || || ||||| || ||||| || || || ||||| |||||||| || Sbjct 8355 GGACAAGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCGGG 8296 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| ||||| || |||||||| || || || || ||||| || | ||||| | || Sbjct 8295 AGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTATCGATAGTGTCAGACGACTC 8236 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || || |||| ||||| ||||| | || || || || |||||||| Sbjct 8235 AACCTCGAGAGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 8185 Score = 132 bits (146), Expect = 1e-25 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || | || ||||| || || || || || || Sbjct 8187 CATACCACCACGGAGACGGAGGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTC 8128 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | ||||| |||||||| | ||||| ||||| ||||| ||||| ||||| || || Sbjct 8127 CGAGAGGGTTCGGCCATCTTCCAACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGG 8068 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || || ||||||||||| || || || || ||||| | || || | || Sbjct 8067 AGGGATACCCTCCTTGTCCTGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTC 8008 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| ||||| || || || ||||| |||||||| Sbjct 8007 CACCTCGAGGGTGATGGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCAT 7957 >seq107 Length=66046 Score = 179 bits (198), Expect = 1e-39 Identities = 861/1356 (63%), Gaps = 17/1356 (1%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || |||||| | |||||||| || |||||||| || || ||||||||||| ||| Sbjct 45081 GCCATCGGTATCGATCTTGGTACTACCTACTCTTGTGTCGCCGTCTGGCAAAATGACCGT 45140 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || | || || || || || |||||| | || || || |||||||| || || ||| Sbjct 45141 GTCGAGGTCATCGCCAACGACCAGGGTAACCGCACCACCCCTTCATACGTCGCCTTCACC 45200 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || | |||||| | || |||||| | || || || || | || || || | || Sbjct 45201 GACTCGGAGCGTCTCATCGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCCCACAAC 45260 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACACAATC 349437 || || || ||||||||||| |||||||| | ||||| | ||| || || Sbjct 45261 ACTGTCTTCGATGCTAAGCGTCTTATTGGCCGCAAGTTCGAC-GACGCCGAGGTTCAGTC 45319 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497 || | || || | ||||| | || | | ||||| || || | Sbjct 45320 CGACATGAAGCACTGGCCTTT---CGAGGTCACCTCCGTCGGTGGCAAGCCCCAGGTCCG 45376 Query 349498 GGTTGAATATAAAGGTGAACAAAAACAATTT-TTACCCGAAGAAATTTCATCAATGGTTT 349556 | || ||||| |||| | || || | ||| ||||| || | || || ||| | | Sbjct 45377 CATCGAGTATAAGGGTG-AGAAGAAGACTTTCACCCCCGAGGAGGTCTCTTCCATGATCT 45435 Query 349557 TAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTA 349616 | | || ||| || | ||||| || || | |||| ||| || | || || || Sbjct 45436 TGCTCAAGATGCGTGAGACCGCTGAGGCTTACCTTGGTGGAACCGTCAAGGACGCCGTCG 45495 Query 349617 TTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCA 349676 | ||||| || || || || || || | |||||| || || || ||||| || | || Sbjct 45496 TCACTGTCCCCGCTTACTTCAACGACTCGCAGCGTCAGGCTACCAAGGATGCCGGTATCA 45555 Query 349677 TTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATG 349736 | |||| | || ||| | | || || || || ||||| || || || || || || | Sbjct 45556 TCTCGGGTCTCAACGTTATGCGTATCATCAACGAGCCCACCGCCGCCGCCATCGCTTACG 45615 Query 349737 GGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTA 349796 | || || || | | || || || || |||| || || ||| | || || |||| Sbjct 45616 GTCTCGACAAGAAGTCCGAGGGTGAGAAGAACGTTCTCATCTTCGATCTCGGAGGAGGTA 45675 Query 349797 CTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTG 349856 | || ||||| || || || || | || ||||| || || || || || || || || | Sbjct 45676 CCTTCGATGTCTCGCTCCTTACCATCGAGGAGGGTATCTTCGAGGTCAAGGCCACCGCCG 45735 Query 349857 GTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAG 349916 |||| || || | ||||| || || || || || |||||||| || || || | | Sbjct 45736 GTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGTCTCGTCAACCACTTCGTCCAGG 45795 Query 349917 AATTTAAGCGTCAAGCTAAAATTGATATTGGAGA-TAATCCTAGAGCAATGCGTCGCCTA 349975 | || ||||| |||| || | ||| | || || | || | ||||| || Sbjct 45796 AGTTCAAGCG-CAAGAACAAGAAGGACTTGACCACCAACGCTCGTGCCCTTCGTCGTCTC 45854 Query 349976 AGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAA 350035 | ||||| ||||| ||||| |||||| || | || || || |||| ||| | || || Sbjct 45855 CGCACTGCCTGTGAGCGTGCCAAGCGTACCCTCTCTTCGGCTGCCCAGACCACCATCGAG 45914 Query 350036 ATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAA 350095 || || || || || || | || |||| | || || || |||||||| || || Sbjct 45915 ATCGACTCGCTCTTCGAGGGTATCGACTTCTACACCTCCATCACCCGTGCTCGTTTCGAG 45974 Query 350096 GAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGAT 350155 || | || || || || || || || || || || || || | || Sbjct 45975 GAGCTCTGCGGTGACCTCTTCTCCCACACCATCGAGCCCGTCGAGAAGGTCCTCCGTGAC 46034 Query 350156 GCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATT 350215 | || || ||| | | | || | || | || ||||||||||| ||||| Sbjct 46035 TCCAAGATCGACAAGGGTTCCGTCCACGAGATCGTCCTTGTCGGTGGTTCTACCCGTATC 46094 Query 350216 CCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CTTCTAGATCAAT 350274 || || ||||| || | || | || || || || ||| || | | | || || || Sbjct 46095 CCCAAGGTTCAGAAGCTCCTCACCGACTTCTTCAACGGCCGTGAGCTCAACAAG-TCGAT 46153 Query 350275 TAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAA 350334 || || ||||| |||||||| || ||||| || || ||||| | ||| | || || Sbjct 46154 CAACCCCGATGAGGCTGTTGCTTACGGTGCCGCCGTCCAGGCCGCCATTCTCTCCGG--- 46210 Query 350335 TAAGAGTTC---TAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGG 350391 | | | ||| || | | || | | || || ||||| | || || || | || Sbjct 46211 TGACACTTCCGAGAAGACCCAGGACTTGCTGCTCCTCGATGTTGCCCCTCTCTCCATGGG 46270 Query 350392 ATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTAC 350451 | || ||| | |||| || | ||| ||||| | || | ||| || || || Sbjct 46271 TATCGAGACTGCCGGTGGTGTCTTCACTCCCCTTATCAAGCGTAACACTACCGTCCCCAC 46330 Query 350452 AAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGT 350511 || |||||| | | || || || | || || || ||||| | ||| || || || Sbjct 46331 CAAGAAGTCCGAGATCTTCTCCACCTACGCTGACAACCAGCCCGGTGTATTGATCCAGGT 46390 Query 350512 ATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAA 350547 || || ||||| ||||||||||| || || || || Sbjct 46391 CTTCGAGGGTGAGCGTGCTCGCACCAAGGACAACAA 46426 >seq62 Length=118391 Score = 147 bits (162), Expect = 7e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | | || || || |||||||| ||||| || || || || || || Sbjct 71408 CATACCACCGCGGAGACGGAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTC 71467 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || || || || ||||||||||| ||||| ||||| ||||| Sbjct 71468 CGAGAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGG 71527 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || ||||||||||| || || || || || ||||| | || || | || Sbjct 71528 TGGGATACCCTCCTTATCCTGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGGACTC 71587 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || || || | ||||| ||||| || || || ||||| |||||||| Sbjct 71588 AACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 71638 >seq33 Length=194022 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || || ||||| || ||||| || || || || || || || Sbjct 184342 ACCACCACGGAGGCGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 184283 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || |||||||| || || || || || ||||| ||||| ||||||||||| || Sbjct 184282 AAGGGTGCGTCCATCTTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCAGGGGG 184223 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 ||| ||||| || ||||| || || || || || || || || | || || | || || Sbjct 184222 AATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCAC 184163 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | ||||| || || || || || ||||| |||||||| Sbjct 184162 CTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTAACAAAGATCTGCAT 184115 >seq11049 Length=215 Score = 93.3 bits (102), Expect = 1e-13 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | || | ||||| ||||| || ||||| || || || || || || Sbjct 127 CATACCACCACGAAGTCGCAACACAAGGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTC 68 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || |||||||| || || ||||||||||| ||||| ||||| ||||| Sbjct 67 CGAGAGCGTGCGGCCGTCTTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGG 8 Query 140627 AGGAAT 140632 || || Sbjct 7 GGGGAT 2 >seq24 Length=214592 Score = 93.3 bits (102), Expect = 1e-13 Identities = 149/213 (70%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | || || || ||||| || ||||| || || || || || || Sbjct 73365 ATACCACCACGGAGACGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCC 73424 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || || || || || || || || || ||||| ||||| ||||| || || Sbjct 73425 GAAAGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCGGGG 73484 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 || || || || || ||||| || || || || || || || || | || || | || Sbjct 73485 GGGATACCCTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAAGACTCC 73544 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTT 140720 || ||||| || | ||||| || ||| ||||| Sbjct 73545 ACCTCAAGGGTGATGGTCTTACCTGTT-GTGTT 73576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515005121710520