Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq81 324 2e-83
seq69 111 2e-19
seq8599 82.4 8e-11
>seq81
Length=91273
Score = 324 bits (358), Expect = 2e-83
Identities = 540/767 (70%), Gaps = 14/767 (2%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTAC--ACGCGTGTCCGT-GAGACGT 53249
||||||| ||||| | ||||||||||| || ||| | | ||| || | ||||| |
Sbjct 56343 TCATGCGTGTCGCTGTTGGTATCCACGGCGAGGACATCGAAAGCG---CCATCGAGACCT 56399
Query 53250 ACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTA 53309
|| | | ||| || |||| ||| || ||||| | || ||||| |||||||||||||
Sbjct 56400 ACAATCTCATGTCGCAGAAGTTCTTCACACACGCTTCCCCCACCCTCTTCAACGCTGGTA 56459
Query 53310 CGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACG 53369
| ||||| ||| | ||| || ||||| || | ||||||||||||||||||||||
Sbjct 56460 CTCCCCACCCCCAGCTCTCGTCGTGTTTCCTTGTCACCATGAAGGATGACTCGATCGACG 56519
Query 53370 GCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTA 53429
| |||||||| || |||||| || ||| ||||||||| | ||||||||||||
Sbjct 56520 GTATCTACGACACCCTCAAGACCTGCGCCATGATCTCCAAGACCGCTGGTGGTATCGGTC 56579
Query 53430 TCCACTGCTCGAACGTCCGTGCGAAC-GGCACACCAATCAAGGGGACGAACGGCGTCGCC 53488
|| || | ||| |||| | |||| ||| | || || || || || ||| |
Sbjct 56580 TCAACATCCACAACATCCGAG-GAACTGGCTCCTACATTGCCGGTACCAATGGTGTCAGC 56638
Query 53489 GATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGT 53548
| || ||||| || |||||||| |||||||||||||| || || ||||| ||||||||
Sbjct 56639 AACGGTATCGTTCCCATGCTCCGTGTCTTCAACAACACTGCACGATACGTTGACCAGGGT 56698
Query 53549 GGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608
||| ||||| || | || ||||||||| | ||||| |||||| | || | |
Sbjct 56699 GGTAACAAGCGTCCCGGTGCCTTTGCCATCTACATTGAGCCTTGGCACTCGGATGTCTTC 56758
Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT- 53667
||||| || || || || ||| || ||| | || ||| | || |||||| || ||
Sbjct 56759 GAGTTCCTTGACCTCCGCAAGAACCACGGTAAGGAGGAGGTACGTGCCCGTGAGCTCTTC 56818
Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTA 53727
||| || || ||| |||| || ||||||||| | | ||| ||| || ||| || ||||
Sbjct 56819 TAC-GCCCTCTGGGTTCCCGATCTCTTCATGAAGAGGGTCGAGCAGAACGGTGACTGGTC 56877
Query 53728 CCTGATGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTGAGGAGTTTAACG 53786
|| |||||||| |||||||| ||||| ||| | | || |||||| ||||||||| |
Sbjct 56878 GCTCATGTGCCCTAACGAGTGTCCCGGTCTCGCTGACTG-CTACGGCGAGGAGTTTGAGC 56936
Query 53787 AGATGTATCGGACG-TACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAG 53845
| || || || |||| | |||| |||| |||| | |||||||| | ||
Sbjct 56937 GTCTCTA-CGAGCGCTACGAGGCCGAGGGTCGCTCCAAGCGCACCGTCAAGGCTCAGAAG 56995
Query 53846 GTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAG 53905
| ||| | || |||||| || |||| ||||| || | || | ||| ||||||
Sbjct 56996 CTCTGGTACGCCATCCTCGAGTCCCAGACCGAGACTGGTAACCCCTTCATCCTTTACAAG 57055
Query 53906 GATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAA 53952
|| | | |||| |||||||||||||||||| |||| ||||||
Sbjct 57056 GACGCTGCCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATCAA 57102
Score = 111 bits (122), Expect = 2e-19
Identities = 521/809 (64%), Gaps = 34/809 (4%)
Strand=Plus/Plus
Query 55139 AACCTGAACCGGGTCATCGACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCCAAC 55198
||| ||||| | ||||||||| || |||||||| | ||| ||||||||||||
Sbjct 57260 AACTTGAACAAGATCATCGACATCAACTACTACCCTGTCCCCGAGGCTCGCAAGTCCAAC 57319
Query 55199 CTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCTC 55258
| || ||||| ||||||| |||||||| ||||| | || ||| ||||||||| |
Sbjct 57320 ATGCGCCACCGACCCATCGGTATCGGTGTTCAGGGTCTTGCTGACGCCTTCATGATCATG 57379
Query 55259 GGATTGCCCTTCGACTCGGAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCAT 55317
|| | | || || ||| || || | ||| | |||||| || | |||
Sbjct 57380 GGCTACGCTTTTGAGTCGCCCGAGGCCCGCCGCCTCAACGTTCAGATCTTCGAGAC-CAT 57438
Query 55318 CTACTTTGCAGCGCTCGAGGAGTCGTGTCATCTGGCT-ATGAGCGAGGGGACCTACGAGA 55376
|||| || || |||||| || || | || || | |||| | || ||||||||||
Sbjct 57439 CTACCACGCTGCTCTCGAGCGATCCTGCGAGCTTGCCCAGGAGC-ACGGCACCTACGAGA 57497
Query 55377 CGTTCCGTGATTCGCCAGCTGACAAGGGACTTCTCCAGTTCGATCTATGGGG-----CAA 55431
| | | | ||| || ||| |||| ||||||| ||| | ||||| ||
Sbjct 57498 CCTACGCCGGTTCCCCCGCTTCGCAGGGTGAGCTCCAGTACGACATGTGGGGTGTTACAC 57557
Query 55432 G-TCTGACCCCATGT--TTGACAAGT-TGAAGCATGACATTCACTTGTGGGGCCTACGCA 55487
|| |||| | | | | | || | ||| | ||| | | || || ||||
Sbjct 57558 CCTCCGACCTCTGGGACTGGGCCAGCCTCAAGGCCAAGATTGCCAAGCACGGTCTTCGCA 57617
Query 55488 ACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACG 55547
|||| || | | || || ||||| || || ||||| |||||| | ||| |||||
Sbjct 57618 ACTCGCTCTTGCTCGCTCCCATGCCTACTGCCTCGACCAGTCAGATTCTCGGCTTCAACG 57677
Query 55548 AGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTG 55607
|| |||||||| ||||| | ||||||||| |||||| || || ||||||||
Sbjct 57678 AGTGCTTCGAGCCTTACACCTCGAACATCTACTCGCGCCGTGTACTCGCTGGTGAGTTC- 57736
Query 55608 TCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAA-GATCAACAAG-----TGGAACC 55661
|| | || ||| | | | || | || || | | | |||| ||||||
Sbjct 57737 -CAGG-TCGTCAACC-CTTGGTT--GCTCCGTGAGCTCGTTGAGCAAGGTCTTTGGAACG 57791
Query 55662 CGCAGATCAAGA--CGGAT-ATTGTGCGGAACGGGGGGTCCGTCCAGAA---TCTGGAGA 55715
|| |||| || || || | | |||| || || | ||||| || | |
Sbjct 57792 ACACCATGAAGAACCGTATCATCGCTC---ACGGTGGTTCGATTCAGAACGTTCCCGGTA 57848
Query 55716 TTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGA 55775
| ||| ||| ||||| || | ||| ||| || |||||||| |||||| | | |
Sbjct 57849 TCCCTGACCGTATCAAGAAGCTCTACAAGACCGTTTGGGAGATCAGTCAGAAGGCTATCA 57908
Query 55776 TTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCA 55835
| |||||| || || |||||||| | |||| |||||| ||||| || |||||| |
Sbjct 57909 TCGACATGGCGGCCGACCGTGGTGCTTTCATCTGCCAGTCGCAGTCGCTCAACATCCACT 57968
Query 55836 TGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGAC 55895
|| | ||| | | | || | | ||||||||||| ||||| ||||||||||| |
Sbjct 57969 TGTCGGCACCTACTTTCGGTCAGCTCACTTCGATGCACTTCTACGGTTGGAAGAAGGGTC 58028
Query 55896 TCAAGACGGGTATGTACTATCTGCGGACC 55924
||||||| |||| ||||| |||| |||
Sbjct 58029 TCAAGACCGGTACCTACTACTTGCGTACC 58057
>seq69
Length=107628
Score = 111 bits (122), Expect = 2e-19
Identities = 309/469 (66%), Gaps = 10/469 (2%)
Strand=Plus/Minus
Query 74805 AGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAG 74864
|| || ||||| || ||||||||||| | ||| ||||||| | ||| ||||| ||||
Sbjct 12563 AGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAACGAACCGGAGAAG 12504
Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA--CGGTGCATCGG-AA 74921
||||| |||||||| || || ||||| || |||| || || || || |||
Sbjct 12503 AAGATACCTTCGACGGCGGCGAAAGCGACGAGACGTTCGGCAAAAGTGGCGCGACGGTCC 12444
Query 74922 GTCATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCT 74981
| |||||| ||||||| || |||||| | ||||| | |||| || |||| ||
Sbjct 12443 GAGATCCAACGAAGAGCCCAGTCGGCTTTTTGCTTGACGACGGGGATGGTCTCGACGGCG 12384
Query 74982 TGGAAGAGG--CTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGT 75039
| ||||||| || || || ||||| || || | |||| || | || ||||
Sbjct 12383 TCGAAGAGGAACTCGC--GCTGCTCGGGTTCGCGGATGTAGGTGTCGATGAGGAGGGAGT 12326
Query 75040 ACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTG 75099
| || || || || || ||| | | |||| | ||||||| | || || || |
Sbjct 12325 AGGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCTTCGG 12266
Query 75100 CAATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGG 75159
| || || || || || | | ||| |||||| | ||||| ||||| || |
Sbjct 12265 CGGCTTGGACTTCAGAGGAGAATCGCTCGACGAGATTCTCGTTAACGATACCGTCGGAAG 12206
Query 75160 CGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAG---TTTGT 75216
||||||| || || || || ||| ||||| ||||| | ||| |||| ||||
Sbjct 12205 CGGCGAAGAAGGCAAGGACGTGAGAGATGAAGTGACGCTCGTTGTCGTTGAGCTTGTTGT 12146
Query 75217 CCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265
||||||| | || ||| | | || ||||| ||| | ||||||||
Sbjct 12145 CCCAATCGTGAAGATCCTTGGAAAGGTCGATCTCTTCGGCGGTCCAGAA 12097
>seq8599
Length=230
Score = 82.4 bits (90), Expect = 8e-11
Identities = 89/114 (78%), Gaps = 8/114 (7%)
Strand=Plus/Minus
Query 117305 GTGAAAATGTAACGA---GAGCTTGCAGCATCCTTGCCACCA-GCAAGACGCGTACCGAA 117360
||||| ||||||||| ||| ||||||||||| || ||| |||| ||| ||||||||
Sbjct 164 GTGAAGATGTAACGACCCGAG---GCAGCATCCTTACCTCCAAGCAA-ACGAGTACCGAA 109
Query 117361 TTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGC 117414
||| || || || || | ||||| | ||||||| |||||||||||| || ||
Sbjct 108 TTGGCCCCTGGGTTCAAGCAGGTTGACGTTGTTGCTGCCCACAAAGTTCTGCGC 55
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547128171832000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |