Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq81 324 2e-83 seq69 111 2e-19 seq8599 82.4 8e-11 >seq81 Length=91273 Score = 324 bits (358), Expect = 2e-83 Identities = 540/767 (70%), Gaps = 14/767 (2%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTAC--ACGCGTGTCCGT-GAGACGT 53249 ||||||| ||||| | ||||||||||| || ||| | | ||| || | ||||| | Sbjct 56343 TCATGCGTGTCGCTGTTGGTATCCACGGCGAGGACATCGAAAGCG---CCATCGAGACCT 56399 Query 53250 ACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTA 53309 || | | ||| || |||| ||| || ||||| | || ||||| ||||||||||||| Sbjct 56400 ACAATCTCATGTCGCAGAAGTTCTTCACACACGCTTCCCCCACCCTCTTCAACGCTGGTA 56459 Query 53310 CGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACG 53369 | ||||| ||| | ||| || ||||| || | |||||||||||||||||||||| Sbjct 56460 CTCCCCACCCCCAGCTCTCGTCGTGTTTCCTTGTCACCATGAAGGATGACTCGATCGACG 56519 Query 53370 GCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTA 53429 | |||||||| || |||||| || ||| ||||||||| | |||||||||||| Sbjct 56520 GTATCTACGACACCCTCAAGACCTGCGCCATGATCTCCAAGACCGCTGGTGGTATCGGTC 56579 Query 53430 TCCACTGCTCGAACGTCCGTGCGAAC-GGCACACCAATCAAGGGGACGAACGGCGTCGCC 53488 || || | ||| |||| | |||| ||| | || || || || || ||| | Sbjct 56580 TCAACATCCACAACATCCGAG-GAACTGGCTCCTACATTGCCGGTACCAATGGTGTCAGC 56638 Query 53489 GATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGT 53548 | || ||||| || |||||||| |||||||||||||| || || ||||| |||||||| Sbjct 56639 AACGGTATCGTTCCCATGCTCCGTGTCTTCAACAACACTGCACGATACGTTGACCAGGGT 56698 Query 53549 GGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608 ||| ||||| || | || ||||||||| | ||||| |||||| | || | | Sbjct 56699 GGTAACAAGCGTCCCGGTGCCTTTGCCATCTACATTGAGCCTTGGCACTCGGATGTCTTC 56758 Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT- 53667 ||||| || || || || ||| || ||| | || ||| | || |||||| || || Sbjct 56759 GAGTTCCTTGACCTCCGCAAGAACCACGGTAAGGAGGAGGTACGTGCCCGTGAGCTCTTC 56818 Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTA 53727 ||| || || ||| |||| || ||||||||| | | ||| ||| || ||| || |||| Sbjct 56819 TAC-GCCCTCTGGGTTCCCGATCTCTTCATGAAGAGGGTCGAGCAGAACGGTGACTGGTC 56877 Query 53728 CCTGATGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTGAGGAGTTTAACG 53786 || |||||||| |||||||| ||||| ||| | | || |||||| ||||||||| | Sbjct 56878 GCTCATGTGCCCTAACGAGTGTCCCGGTCTCGCTGACTG-CTACGGCGAGGAGTTTGAGC 56936 Query 53787 AGATGTATCGGACG-TACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAG 53845 | || || || |||| | |||| |||| |||| | |||||||| | || Sbjct 56937 GTCTCTA-CGAGCGCTACGAGGCCGAGGGTCGCTCCAAGCGCACCGTCAAGGCTCAGAAG 56995 Query 53846 GTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAG 53905 | ||| | || |||||| || |||| ||||| || | || | ||| |||||| Sbjct 56996 CTCTGGTACGCCATCCTCGAGTCCCAGACCGAGACTGGTAACCCCTTCATCCTTTACAAG 57055 Query 53906 GATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAA 53952 || | | |||| |||||||||||||||||| |||| |||||| Sbjct 57056 GACGCTGCCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATCAA 57102 Score = 111 bits (122), Expect = 2e-19 Identities = 521/809 (64%), Gaps = 34/809 (4%) Strand=Plus/Plus Query 55139 AACCTGAACCGGGTCATCGACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCCAAC 55198 ||| ||||| | ||||||||| || |||||||| | ||| |||||||||||| Sbjct 57260 AACTTGAACAAGATCATCGACATCAACTACTACCCTGTCCCCGAGGCTCGCAAGTCCAAC 57319 Query 55199 CTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCTC 55258 | || ||||| ||||||| |||||||| ||||| | || ||| ||||||||| | Sbjct 57320 ATGCGCCACCGACCCATCGGTATCGGTGTTCAGGGTCTTGCTGACGCCTTCATGATCATG 57379 Query 55259 GGATTGCCCTTCGACTCGGAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCAT 55317 || | | || || ||| || || | ||| | |||||| || | ||| Sbjct 57380 GGCTACGCTTTTGAGTCGCCCGAGGCCCGCCGCCTCAACGTTCAGATCTTCGAGAC-CAT 57438 Query 55318 CTACTTTGCAGCGCTCGAGGAGTCGTGTCATCTGGCT-ATGAGCGAGGGGACCTACGAGA 55376 |||| || || |||||| || || | || || | |||| | || |||||||||| Sbjct 57439 CTACCACGCTGCTCTCGAGCGATCCTGCGAGCTTGCCCAGGAGC-ACGGCACCTACGAGA 57497 Query 55377 CGTTCCGTGATTCGCCAGCTGACAAGGGACTTCTCCAGTTCGATCTATGGGG-----CAA 55431 | | | | ||| || ||| |||| ||||||| ||| | ||||| || Sbjct 57498 CCTACGCCGGTTCCCCCGCTTCGCAGGGTGAGCTCCAGTACGACATGTGGGGTGTTACAC 57557 Query 55432 G-TCTGACCCCATGT--TTGACAAGT-TGAAGCATGACATTCACTTGTGGGGCCTACGCA 55487 || |||| | | | | | || | ||| | ||| | | || || |||| Sbjct 57558 CCTCCGACCTCTGGGACTGGGCCAGCCTCAAGGCCAAGATTGCCAAGCACGGTCTTCGCA 57617 Query 55488 ACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACG 55547 |||| || | | || || ||||| || || ||||| |||||| | ||| ||||| Sbjct 57618 ACTCGCTCTTGCTCGCTCCCATGCCTACTGCCTCGACCAGTCAGATTCTCGGCTTCAACG 57677 Query 55548 AGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTG 55607 || |||||||| ||||| | ||||||||| |||||| || || |||||||| Sbjct 57678 AGTGCTTCGAGCCTTACACCTCGAACATCTACTCGCGCCGTGTACTCGCTGGTGAGTTC- 57736 Query 55608 TCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAA-GATCAACAAG-----TGGAACC 55661 || | || ||| | | | || | || || | | | |||| |||||| Sbjct 57737 -CAGG-TCGTCAACC-CTTGGTT--GCTCCGTGAGCTCGTTGAGCAAGGTCTTTGGAACG 57791 Query 55662 CGCAGATCAAGA--CGGAT-ATTGTGCGGAACGGGGGGTCCGTCCAGAA---TCTGGAGA 55715 || |||| || || || | | |||| || || | ||||| || | | Sbjct 57792 ACACCATGAAGAACCGTATCATCGCTC---ACGGTGGTTCGATTCAGAACGTTCCCGGTA 57848 Query 55716 TTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGA 55775 | ||| ||| ||||| || | ||| ||| || |||||||| |||||| | | | Sbjct 57849 TCCCTGACCGTATCAAGAAGCTCTACAAGACCGTTTGGGAGATCAGTCAGAAGGCTATCA 57908 Query 55776 TTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCA 55835 | |||||| || || |||||||| | |||| |||||| ||||| || |||||| | Sbjct 57909 TCGACATGGCGGCCGACCGTGGTGCTTTCATCTGCCAGTCGCAGTCGCTCAACATCCACT 57968 Query 55836 TGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGAC 55895 || | ||| | | | || | | ||||||||||| ||||| ||||||||||| | Sbjct 57969 TGTCGGCACCTACTTTCGGTCAGCTCACTTCGATGCACTTCTACGGTTGGAAGAAGGGTC 58028 Query 55896 TCAAGACGGGTATGTACTATCTGCGGACC 55924 ||||||| |||| ||||| |||| ||| Sbjct 58029 TCAAGACCGGTACCTACTACTTGCGTACC 58057 >seq69 Length=107628 Score = 111 bits (122), Expect = 2e-19 Identities = 309/469 (66%), Gaps = 10/469 (2%) Strand=Plus/Minus Query 74805 AGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAG 74864 || || ||||| || ||||||||||| | ||| ||||||| | ||| ||||| |||| Sbjct 12563 AGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAACGAACCGGAGAAG 12504 Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA--CGGTGCATCGG-AA 74921 ||||| |||||||| || || ||||| || |||| || || || || ||| Sbjct 12503 AAGATACCTTCGACGGCGGCGAAAGCGACGAGACGTTCGGCAAAAGTGGCGCGACGGTCC 12444 Query 74922 GTCATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCT 74981 | |||||| ||||||| || |||||| | ||||| | |||| || |||| || Sbjct 12443 GAGATCCAACGAAGAGCCCAGTCGGCTTTTTGCTTGACGACGGGGATGGTCTCGACGGCG 12384 Query 74982 TGGAAGAGG--CTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGT 75039 | ||||||| || || || ||||| || || | |||| || | || |||| Sbjct 12383 TCGAAGAGGAACTCGC--GCTGCTCGGGTTCGCGGATGTAGGTGTCGATGAGGAGGGAGT 12326 Query 75040 ACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTG 75099 | || || || || || ||| | | |||| | ||||||| | || || || | Sbjct 12325 AGGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCTTCGG 12266 Query 75100 CAATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGG 75159 | || || || || || | | ||| |||||| | ||||| ||||| || | Sbjct 12265 CGGCTTGGACTTCAGAGGAGAATCGCTCGACGAGATTCTCGTTAACGATACCGTCGGAAG 12206 Query 75160 CGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAG---TTTGT 75216 ||||||| || || || || ||| ||||| ||||| | ||| |||| |||| Sbjct 12205 CGGCGAAGAAGGCAAGGACGTGAGAGATGAAGTGACGCTCGTTGTCGTTGAGCTTGTTGT 12146 Query 75217 CCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265 ||||||| | || ||| | | || ||||| ||| | |||||||| Sbjct 12145 CCCAATCGTGAAGATCCTTGGAAAGGTCGATCTCTTCGGCGGTCCAGAA 12097 >seq8599 Length=230 Score = 82.4 bits (90), Expect = 8e-11 Identities = 89/114 (78%), Gaps = 8/114 (7%) Strand=Plus/Minus Query 117305 GTGAAAATGTAACGA---GAGCTTGCAGCATCCTTGCCACCA-GCAAGACGCGTACCGAA 117360 ||||| ||||||||| ||| ||||||||||| || ||| |||| ||| |||||||| Sbjct 164 GTGAAGATGTAACGACCCGAG---GCAGCATCCTTACCTCCAAGCAA-ACGAGTACCGAA 109 Query 117361 TTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGC 117414 ||| || || || || | ||||| | ||||||| |||||||||||| || || Sbjct 108 TTGGCCCCTGGGTTCAAGCAGGTTGACGTTGTTGCTGCCCACAAAGTTCTGCGC 55 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547128171832000