Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq144 104 1e-17
seq62 91.5 9e-14
>seq144
Length=29207
Score = 104 bits (114), Expect = 1e-17
Identities = 165/233 (71%), Gaps = 3/233 (1%)
Strand=Plus/Minus
Query 34476 GTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC 34535
|| ||| || | |||||||| || | || | |||||||||||| || ||||| || ||
Sbjct 9100 GTTGCCTCCACGGAGACGCAAGACAAGGTGCAAAGTGCTCTCCTTCTGGATGTTGTAGTC 9041
Query 34536 TGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCC-G 34594
|| || || || ||||||| | || ||||| ||||| || | |||||| |||||| |
Sbjct 9040 CGAGAGGGTGCGACCGTCTTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCCAG 8981
Query 34595 GCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTC 34653
| || | ||||||||||| ||| || | || ||| | ||| ||||| |
Sbjct 8980 GGGGAATATCCTCCTTGTCT-TGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGACGAC 8922
Query 34654 TCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || | ||| ||||| || || || | ||| || ||||| ||||||||
Sbjct 8921 TCAACCTCGAGGGTGATCGTCTTTCCAGTGAGCGTCTTGACAAAGATCTGCAT 8869
Score = 102 bits (112), Expect = 5e-17
Identities = 156/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||||| || | ||| |||||| || ||||| || || || || |||||
Sbjct 8174 AGACGGAGGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGG 8115
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| | |||||||| || || || | |||||| ||||| || || | ||||||
Sbjct 8114 CCATCTTCCAACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCC 8055
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| ||| ||| | || ||| | ||| ||||| |||||| || | |||
Sbjct 8054 TTGTC-CTGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGT 7996
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|| || |||||||| | || || ||||| |||||||||
Sbjct 7995 GATGGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCATG 7956
Score = 91.5 bits (100), Expect = 9e-14
Identities = 152/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 34491 ACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTC 34550
||| | ||| | || |||||||||||||| || ||||| || || ||||| || || |
Sbjct 8856 ACGAAGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACC 8797
Query 34551 GTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTT 34610
||||| | || ||||| ||||| || | |||||| ||||| || || | ||||||||
Sbjct 8796 ATCTTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTT 8737
Query 34611 GTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTA 34669
||| ||| || | || || | ||| ||||| | ||| ||||||| || |
Sbjct 8736 GTC-CTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACTTCCAATGTGA 8678
Query 34670 TCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || || || || | || || ||||| || |||||
Sbjct 8677 TGGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 8641
Score = 89.7 bits (98), Expect = 3e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|| || |||||||||||||||||||| || || || |||||||| |||| ||||||||
Sbjct 8615 TGAAGCGTGCTCTCCTTTTGAATGTTGTAGTCGGAGAGTGTTCGGCCGTCCTCAAGTTGC 8556
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622
|| || ||||| || | || || || || || || | || |||||||| ||||||
Sbjct 8555 TTTCCAGCAAAGATGAGGCGTTGCTGATCAGGTGGAATGCCTTCCTTGTCCTGGATCTT 8497
>seq62
Length=118391
Score = 91.5 bits (100), Expect = 9e-14
Identities = 153/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||||||| || ||| ||||| || ||||| ||||||||||| || ||
Sbjct 71193 AGACGGAGGACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAATCTGAAAGAGTGCGG 71252
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
||||||| || || || ||||| || || | ||||| || || || || | || |||
Sbjct 71253 CCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCTTCC 71312
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||| || | || ||| | || ||||| ||| ||||| | ||
Sbjct 71313 TTGTCCTGGATC-TTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCGACTTCAAGAGT 71371
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || || || || || ||||| ||||||||
Sbjct 71372 GATGGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 71410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314680348751720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |