Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq24 82.4 6e-11 >seq24 Length=214592 Score = 82.4 bits (90), Expect = 6e-11 Identities = 180/268 (67%), Gaps = 4/268 (1%) Strand=Plus/Plus Query 118375 AAATCTTCAAACTTAAAGTCTTCTATATTTTTGATATCCTTGTTTATGGATAGTGTGGGA 118434 || ||||| |||| || | || |||| | | ||| | || ||| ||| |||| Sbjct 133056 AAGTCTTCGTACTTGAATGCATCGATATCGTCCACCTCCCTCTTGATGTTGAGTTTGGGG 133115 Query 118435 AACGGGAGAGGCTCCCTTGTGAGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGACA 118494 ||||| | |||||| ||| |||||| | |||| || || | |||| | | || ||| Sbjct 133116 AACGGCAAAGGCTCTCTTTCGAGTTGCACCTTCAACGGTTCCACATGATCCTTGTACACA 133175 Query 118495 TGAGCATCCCCAATTGTATGTATGAATTCACCAGG--TGTAAGCCCTGTCAGGTGAGCAA 118552 ||||||||||| || | | | | ||||| || | || |||||| | |||| Sbjct 133176 TGAGCATCCCCCATCGAAAGAACCAATTCTTTCGGCTCGCAA--TCTGTCACCTTGGCAA 133233 Query 118553 TCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCCATGTCTG 118612 ||||||| ||||||| | |||||||| | || || || || |||| |||| || Sbjct 133234 TCATGTAGGTCAACAGAGCATAGCTGGCGATGTTGAACGGTACGCCCAATCCCAAATCGC 133293 Query 118613 CTGATCTCTGGTACAATTGGCAAGAGAG 118640 || ||||||| |||||| ||||| Sbjct 133294 AACTTCGTTGGTACATTTGGCAGGAGAG 133321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414411939561760