Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq33 190 5e-43
seq62 185 2e-41
seq144 170 4e-37
seq24 145 2e-29
seq11049 89.7 1e-12
>seq33
Length=194022
Score = 190 bits (210), Expect = 5e-43
Identities = 171/215 (80%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || |||||||| || ||||| || |||||||| || |||| |||||| | |||||||
Sbjct 184326 AGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGTCCATCT 184267
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| || || || || ||||| |||| ||||||||||||
Sbjct 184266 TCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 184207
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||||||||| || || ||||| || ||||| |||
Sbjct 184206 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTC 184147
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| ||||| || ||||| ||||| | |||||| ||
Sbjct 184146 TTGCCCGTAAGGGTCTTAACAAAGATCTGCATCTT 184112
>seq62
Length=118391
Score = 185 bits (204), Expect = 2e-41
Identities = 175/222 (79%), Gaps = 1/222 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||||||||||||||| || |||||||| || |||| ||||| | |||||
Sbjct 71427 AGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCC 71486
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || || |||||||| || || |||||||| || | || ||||| |||
Sbjct 71487 TCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGTGGGATACCCTCCTTATCC 71546
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| || |||||||| ||| ||||||||||| ||||| |||
Sbjct 71547 TGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTC 71606
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTA-TGGTT 211123
|| || ||||| ||||| ||||| | |||||| | | |||||
Sbjct 71607 TTGCCGGTGAGGGTCTTGACAAAGATCTGCATCTGAGTGGTT 71648
Score = 170 bits (188), Expect = 4e-37
Identities = 165/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | ||||| ||||| || || |||||||| ||||| | ||| || | || |||
Sbjct 71199 AGGACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAATCTGAAAGAGTGCGGCCGTCT 71258
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| ||||| || || || ||||| | ||||||||||||
Sbjct 71259 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCTTCCTTGTCC 71318
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||||||||| || || || || |||||||| |||
Sbjct 71319 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCGACTTCAAGAGTGATGGTC 71378
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | |||||| ||||| | ||||||
Sbjct 71379 TTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 71410
>seq144
Length=29207
Score = 170 bits (188), Expect = 4e-37
Identities = 165/211 (78%), Gaps = 1/211 (0%)
Strand=Plus/Minus
Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964
||||||||| | |||| ||| || |||||||| || |||| ||||| | || |||||
Sbjct 9079 GACAAGGTGCAAAGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCGTCTTC 9020
Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTC-AGGAGGAACTCCTTCCTTGTCCT 211023
|| |||||| ||||| |||||||| || || ||||| ||| |||| | |||||||| |
Sbjct 9019 CAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCCAGGGGGAATATCCTCCTTGTCTT 8960
Query 211024 GGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCT 211083
| ||||| || ||||| || |||||||| || ||||||||||| ||||||||||
Sbjct 8959 GAATCTTGGCCTTGACGTTGTCAATGGTGTCCGACGACTCAACCTCGAGGGTGATCGTCT 8900
Query 211084 TTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||| ||||| ||||| ||||| | ||||||
Sbjct 8899 TTCCAGTGAGCGTCTTGACAAAGATCTGCAT 8869
Score = 167 bits (184), Expect = 5e-36
Identities = 164/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||||||||||||| ||| || |||||||| || |||| |||||| | ||||||
Sbjct 8852 AGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCATCT 8793
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| |||||| ||||| |||||||| || || |||||||| || | || |||||||||
Sbjct 8792 TCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 8733
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || || || || || ||||| ||| || || || | ||||| |||
Sbjct 8732 TGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACTTCCAATGTGATGGTC 8673
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| ||||| ||||| | |||||
Sbjct 8672 TTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 8641
Score = 158 bits (174), Expect = 3e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | ||| | |||||||| || |||||||| || |||| ||||| | ||||||
Sbjct 8168 AGGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCATCT 8109
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| ||| || || |||||||| || || || ||||| ||||| | || |||||||||
Sbjct 8108 TCCAACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 8049
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| || || || ||||| || |||||||| || || |||||||| ||||| |||
Sbjct 8048 TGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTC 7989
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || |||||||| ||||| | ||||||
Sbjct 7988 TTACCGGTCAGAGTCTTGACAAAGATCTGCAT 7957
Score = 152 bits (168), Expect = 1e-31
Identities = 167/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| |||| || || |||||||| ||| ||| ||||| ||||| || || | || ||
Sbjct 8634 ACGGAGTCGGAGAACGAGGTGAAGCGTGCTCTCCTTTTGAATGTTGTAGTCGGAGAGTGT 8575
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || || || || ||||| || || ||||| |||||||| || ||||| |||| ||
Sbjct 8574 TCGGCCGTCCTCAAGTTGCTTTCCAGCAAAGATGAGGCGTTGCTGATCAGGTGGAATGCC 8515
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||||||||||||| || ||||| |||||||| ||||| || ||||||||
Sbjct 8514 TTCCTTGTCCTGGATCTTGGCCTTTACGTTGTCGATGGTATCAGAAGACTCGACCTCGAG 8455
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| || ||||| || || || || || || || | ||||||
Sbjct 8454 AGTAATGGTCTTGCCTGTAAGGGTTTTGACGAAGATCTGCAT 8413
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || || || || || || ||||| |||||||| ||||| | | |||
Sbjct 8406 ACGAAGACGGAGAACGAGATGGAGGGTCGATTCTTTCTGGATGTTGTAATCGGACAAGGT 8347
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || || || |||||||| || ||||| || || || || || || ||||||| ||
Sbjct 8346 GCGGCCGTCCTCAAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCGGGAGGAATGCC 8287
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||||||| ||||| || ||||| ||||| |||||||| |||||||||||
Sbjct 8286 TTCCTTGTCCTGAATCTTGGCCTTGACGTTATCGATAGTGTCAGACGACTCAACCTCGAG 8227
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| || ||||| || || | ||||| || || | ||||||
Sbjct 8226 AGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 8185
>seq24
Length=214592
Score = 145 bits (160), Expect = 2e-29
Identities = 145/188 (77%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| |||||||| || ||||| || |||||||| || |||| |||||| | || ||
Sbjct 73383 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 73442
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| || || || ||||| || || | || |||||||||
Sbjct 73443 TCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCC 73502
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||||||||| || || ||||| || ||||| |||
Sbjct 73503 TGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTC 73562
Query 211083 TTTCCCGT 211090
|| || ||
Sbjct 73563 TTACCTGT 73570
>seq11049
Length=215
Score = 89.7 bits (98), Expect = 1e-12
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||||| | ||||||||||| || ||||| || |||||||| || |||| || ||
Sbjct 118 ACGAAGTCGCAACACAAGGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGT 59
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006
| || ||||| |||||||| || || ||||| || || || |||||||| ||
Sbjct 58 GCGGCCGTCTTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGGGG 5
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1158961305006600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |