Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq144 104 2e-17 seq62 98.7 7e-16 >seq144 Length=29207 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||| | || || || || || |||||||| ||||| || | Sbjct 8185 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATTACTCTCGAGGTTGAGTCGTCT 8244 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| | || | | || || ||| ||||| ||||| | || || ||||| Sbjct 8245 GACACTATCGATAACGTCAAGGCCAAGATTCAGGACAAGGAAGGCATTCCTCCCGATCAG 8304 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || ||||| || || || || |||| ||||| || |||||||||| Sbjct 8305 CAGCGTCTCATTTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACCTTGTCCGATTACAAC 8364 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820 || || ||||| || || | ||| | ||| Sbjct 8365 ATCCAGAAAGAATCGACCCTCCATCTCGTT 8394 >seq62 Length=118391 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || | || || || || |||||||| ||||| || || || Sbjct 71410 ATGCAGATCTTTGTCAAGACTTTGACTGGCAAGACCATCACTCTTGAAGTCGAGTCTTCG 71351 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || ||||| ||||| | || || ||||| Sbjct 71350 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGATCAG 71291 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || || |||||||| || || ||||||| |||||| | ||||||||| Sbjct 71290 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGCACTCTTTCAGATTACAAC 71231 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819 || || || || |||||| | ||||| || Sbjct 71230 ATCCAGAAGGAATCCACACTTCATTTGGT 71202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337956705722720