Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq144 134 3e-26 seq62 134 3e-26 seq33 123 6e-23 seq457 120 7e-22 seq24 114 3e-20 >seq144 Length=29207 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || || ||||| || |||||||| |||| |||||||||| ||| || Sbjct 8406 ACGAAGACGGAGAACGAGATGGAGGGTCGATTCTTTCTGGATGTTGTAATCGGACAAGGT 8347 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| || ||||| || || || || || ||||| ||||| || Sbjct 8346 GCGGCCGTCCTCAAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCGGGAGGAATGCC 8287 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| || ||||| ||| || ||||| ||||| || | || || || | Sbjct 8286 TTCCTTGTCCTGAATCTTGGCCTTGACGTTATCGATAGTGTCAGACGACTCAACCTCGAG 8227 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||||||| ||||| || || | ||| | ||||| Sbjct 8226 AGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 8185 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| | ||||| || || |||| ||||| || | | |||| |||||| Sbjct 8168 AGGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCATCT 8109 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | ||| || ||||||||||| || || || |||||||| || ||||| |||||||| Sbjct 8108 TCCAACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 8049 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || || || ||| || || |||||||| || | ||||| || | ||||| ||| Sbjct 8048 TGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTC 7989 Query 225682 TTGCCCGTCAAAGTTTT 225698 || || |||| ||| || Sbjct 7988 TTACCGGTCAGAGTCTT 7972 Score = 113 bits (124), Expect = 1e-19 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| |||| || || ||||| || ||| || ||||| | ||||| |||| | || Sbjct 8634 ACGGAGTCGGAGAACGAGGTGAAGCGTGCTCTCCTTTTGAATGTTGTAGTCGGAGAGTGT 8575 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || || || || || ||||| ||||| ||||| || ||||| || || || ||||| || Sbjct 8574 TCGGCCGTCCTCAAGTTGCTTTCCAGCAAAGATGAGGCGTTGCTGATCAGGTGGAATGCC 8515 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| |||||||| ||| || |||||||| || || | || || || | Sbjct 8514 TTCCTTGTCCTGGATCTTGGCCTTTACGTTGTCGATGGTATCAGAAGACTCGACCTCGAG 8455 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||||||| || | ||||| | ||| | ||||| Sbjct 8454 AGTAATGGTCTTGCCTGTAAGGGTTTTGACGAAGATCTGCAT 8413 Score = 98.7 bits (108), Expect = 2e-15 Identities = 142/199 (71%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || ||||||||| | |||| || || |||| ||||| || | | || Sbjct 9091 ACGGAGACGCAAGACAAGGTGCAAAGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGGGT 9032 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCG-GGCGGAATAC 225610 | || ||||| | |||||| || || |||||||| || || ||||| || |||||| Sbjct 9031 GCGACCGTCTTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCCAGGGGGAATAT 8972 Query 225611 CTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 | ||||||||||| ||||| ||| || || |||||||| || | || || || | Sbjct 8971 CCTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGACGACTCAACCTCGA 8912 Query 225671 ACGTGATCGTCTTGCCCGT 225689 ||||||||||| || || Sbjct 8911 GGGTGATCGTCTTTCCAGT 8893 >seq62 Length=118391 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | || || |||||||| || |||| |||||||| | | ||| | || ||| Sbjct 71199 AGGACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAATCTGAAAGAGTGCGGCCGTCT 71258 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || || ||||| || || ||||||||||| Sbjct 71259 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCTTCCTTGTCC 71318 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || | || || || | ||||| ||| Sbjct 71319 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCGACTTCAAGAGTGATGGTC 71378 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| |||||||| || Sbjct 71379 TTGCCAGTCAAAGTCTT 71395 >seq33 Length=194022 Score = 123 bits (136), Expect = 6e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || || || || || |||| ||||| || | | || | |||||| Sbjct 184326 AGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGTCCATCT 184267 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || || || || ||||| ||||||||||| Sbjct 184266 TCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 184207 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || | ||||| || | ||||| ||| Sbjct 184206 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTC 184147 Query 225682 TTGCCCGT 225689 |||||||| Sbjct 184146 TTGCCCGT 184139 >seq457 Length=569 Score = 120 bits (132), Expect = 7e-22 Identities = 135/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610 |||||| ||||| || |||||||| || ||||| || || ||||| ||||| | ||||| Sbjct 460 CCAACTATACAATGTAATTATTACAGCACATGCTTTCGTAATGATCTTCTTCATGGTTAT 401 Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670 ||| | ||| |||| |||||||| || | | || || | ||||||||||| ||||| Sbjct 400 GCCAGCAATGGTAGGTGGTTTCGGTAACTACCTTGTACCAGTTATGATTGGTGCGCCTGA 341 Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCT 7730 |||||| || ||| | || ||||| || || || ||||||| || || || |||| Sbjct 340 TATGGCGTTCCCACGACTAAACAACATTTCATTCTGGCTACTACCTCCATCACTAATTCT 281 Query 7731 A 7731 | Sbjct 280 A 280 >seq24 Length=214592 Score = 114 bits (126), Expect = 3e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || || || |||| ||||| || | | || | || || Sbjct 73383 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 73442 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || |||||||| || ||||| |||||||| Sbjct 73443 TCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCC 73502 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || | ||||| || | ||||| ||| Sbjct 73503 TGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTC 73562 Query 225682 TTGCCCGT 225689 || || || Sbjct 73563 TTACCTGT 73570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192335013710960