Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq81 105 9e-18 seq69 86.0 9e-12 >seq81 Length=91273 Score = 105 bits (116), Expect = 9e-18 Identities = 579/921 (63%), Gaps = 4/921 (0%) Strand=Plus/Minus Query 77730 ATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTT 77789 || ||||| || || || || || ||||| || || || || | ||||||||||| Sbjct 57129 ATGATCTCTGTGCAAAGGTTGGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGCTCTTG 57070 Query 77790 TTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATA 77849 ||| | |||||| ||||| || || || | || || || |||| || |||| Sbjct 57069 CGGTTGGCAGCGTCCTTGTAAAGGATGAAGGGGTTACCAGTCTCGGTCTGGGACTCGAGG 57010 Query 77850 ATAGATTTCCAGACGACTCT-AGCTTTTATCATAGATTTGTATCGCCTCTCTCTTTCATA 77908 || | | ||||| | ||| ||| || | | ||| | || | ||| || || Sbjct 57009 ATGGCGTACCAGA-GCTTCTGAGCCTTGACGGTGCGCTTGGAGCGACCCTCGGCCTCGTA 56951 Query 77909 TTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATT 77968 | || || || ||||| || || || | ||| | | || || || || || Sbjct 56950 GCGCTCGTAGAGACGCTCAAACTCCTCGCCGTAGCAGTCAGCGAGACCGGGACACTCGTT 56891 Query 77969 TGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTAT 78028 |||||||| | ||||||||||| | | || || | ||||| |||||||| || | Sbjct 56890 AGGGCACATGAGCGACCAGTCACCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGAAC 56831 Query 78029 CCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAG 78088 ||| || || || || || |||| | || || || || ||||| || Sbjct 56830 CCAGAGGGCGTAGAAGAGCTCACGGGCACGTACCTCCTCCTTACCGTGGTTCTTGCGGAG 56771 Query 78089 ATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGG 78148 || || ||||| | | ||| || ||||| || || | || || || | | || || Sbjct 56770 GTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCAATGTAGATGGCAAAGGCACCGGG 56711 Query 78149 TCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGG 78208 || || ||||| ||||| || | |||| || ||||| || | || | | ||| || Sbjct 56710 ACGCTTGTTACCACCCTGGTCAACGTATCGTGCAGTGTTGTTGAAGACACGGAGCATGGG 56651 Query 78209 AATAATACCGTTAGATG-TTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATAT 78267 || |||||||| | || ||||| || || | ||| || ||| || | || || | Sbjct 56650 AACGATACCGTT-GCTGACACCATTGGTACCGGCAATGTAGGAGCCAGTTCCTCGGATGT 56592 Query 78268 TACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATG 78327 | ||| | || || || || || |||| || || | ||||| || | | Sbjct 56591 TGTGGATGTTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGG 56532 Query 78328 TATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTT 78387 | ||||||||||| || || ||||||| ||||| | | ||| ||||| || | | Sbjct 56531 TGTCGTAGATACCGTCGATCGAGTCATCCTTCATGGTGACAAGGAAACACGACGAGAGCT 56472 Query 78388 GATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAG 78447 | | || ||| || || || || | || || || || || || || | || | | Sbjct 56471 GGGGGTGGGGAGTACCAGCGTTGAAGAGGGTGGGGGAAGCGTGTGTGAAGAACTTCTGCG 56412 Query 78448 AAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTA 78507 | | |||||||| || || || || ||| |||||| || || || || || | Sbjct 56411 ACATGAGATTGTAGGTCTCGATGGCGCTTTCGATGTCCTCGCCGTGGATACCAACAGCGA 56352 Query 78508 CACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATG 78567 ||||||| | ||| ||||| || | ||| | ||| || || | | ||| | Sbjct 56351 CACGCATGAGCATGTGCTGGGGACGCTCAGCAACCTTGCCGTTAATACGGAGAAGGTAGG 56292 Query 78568 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAA 78627 || || | || || ||||| || ||||||| ||||| | ||||||||| || Sbjct 56291 ATCGCTCGAGGGTCTTGAAACCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATGATTG 56232 Query 78628 CAGAATTTAGTTTATCTTTGT 78648 | || | || | ||| |||| Sbjct 56231 CCGAGTCGAGCTGATCCTTGT 56211 >seq69 Length=107628 Score = 86.0 bits (94), Expect = 9e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || |||||||||||||| || ||||| || |||||||| || || | ||| Sbjct 12578 TCGTTGGAGAAAGTGAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCG 12519 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCG 48284 || || || || ||||| || ||||| ||||| || || ||| Sbjct 12518 AACGAACCGGAGAAGAAGATACCTTCGACGGCGGCGAAAGCG 12477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694557305657600