Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq81 105 9e-18
seq69 86.0 9e-12
>seq81
Length=91273
Score = 105 bits (116), Expect = 9e-18
Identities = 579/921 (63%), Gaps = 4/921 (0%)
Strand=Plus/Minus
Query 77730 ATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTT 77789
|| ||||| || || || || || ||||| || || || || | |||||||||||
Sbjct 57129 ATGATCTCTGTGCAAAGGTTGGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGCTCTTG 57070
Query 77790 TTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATA 77849
||| | |||||| ||||| || || || | || || || |||| || ||||
Sbjct 57069 CGGTTGGCAGCGTCCTTGTAAAGGATGAAGGGGTTACCAGTCTCGGTCTGGGACTCGAGG 57010
Query 77850 ATAGATTTCCAGACGACTCT-AGCTTTTATCATAGATTTGTATCGCCTCTCTCTTTCATA 77908
|| | | ||||| | ||| ||| || | | ||| | || | ||| || ||
Sbjct 57009 ATGGCGTACCAGA-GCTTCTGAGCCTTGACGGTGCGCTTGGAGCGACCCTCGGCCTCGTA 56951
Query 77909 TTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATT 77968
| || || || ||||| || || || | ||| | | || || || || ||
Sbjct 56950 GCGCTCGTAGAGACGCTCAAACTCCTCGCCGTAGCAGTCAGCGAGACCGGGACACTCGTT 56891
Query 77969 TGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTAT 78028
|||||||| | ||||||||||| | | || || | ||||| |||||||| || |
Sbjct 56890 AGGGCACATGAGCGACCAGTCACCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGAAC 56831
Query 78029 CCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAG 78088
||| || || || || || |||| | || || || || ||||| ||
Sbjct 56830 CCAGAGGGCGTAGAAGAGCTCACGGGCACGTACCTCCTCCTTACCGTGGTTCTTGCGGAG 56771
Query 78089 ATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGG 78148
|| || ||||| | | ||| || ||||| || || | || || || | | || ||
Sbjct 56770 GTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCAATGTAGATGGCAAAGGCACCGGG 56711
Query 78149 TCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGG 78208
|| || ||||| ||||| || | |||| || ||||| || | || | | ||| ||
Sbjct 56710 ACGCTTGTTACCACCCTGGTCAACGTATCGTGCAGTGTTGTTGAAGACACGGAGCATGGG 56651
Query 78209 AATAATACCGTTAGATG-TTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATAT 78267
|| |||||||| | || ||||| || || | ||| || ||| || | || || |
Sbjct 56650 AACGATACCGTT-GCTGACACCATTGGTACCGGCAATGTAGGAGCCAGTTCCTCGGATGT 56592
Query 78268 TACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATG 78327
| ||| | || || || || || |||| || || | ||||| || | |
Sbjct 56591 TGTGGATGTTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGG 56532
Query 78328 TATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTT 78387
| ||||||||||| || || ||||||| ||||| | | ||| ||||| || | |
Sbjct 56531 TGTCGTAGATACCGTCGATCGAGTCATCCTTCATGGTGACAAGGAAACACGACGAGAGCT 56472
Query 78388 GATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAG 78447
| | || ||| || || || || | || || || || || || || | || | |
Sbjct 56471 GGGGGTGGGGAGTACCAGCGTTGAAGAGGGTGGGGGAAGCGTGTGTGAAGAACTTCTGCG 56412
Query 78448 AAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTA 78507
| | |||||||| || || || || ||| |||||| || || || || || |
Sbjct 56411 ACATGAGATTGTAGGTCTCGATGGCGCTTTCGATGTCCTCGCCGTGGATACCAACAGCGA 56352
Query 78508 CACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATG 78567
||||||| | ||| ||||| || | ||| | ||| || || | | ||| |
Sbjct 56351 CACGCATGAGCATGTGCTGGGGACGCTCAGCAACCTTGCCGTTAATACGGAGAAGGTAGG 56292
Query 78568 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAA 78627
|| || | || || ||||| || ||||||| ||||| | ||||||||| ||
Sbjct 56291 ATCGCTCGAGGGTCTTGAAACCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATGATTG 56232
Query 78628 CAGAATTTAGTTTATCTTTGT 78648
| || | || | ||| ||||
Sbjct 56231 CCGAGTCGAGCTGATCCTTGT 56211
>seq69
Length=107628
Score = 86.0 bits (94), Expect = 9e-12
Identities = 80/102 (78%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242
||||| || || |||||||||||||| || ||||| || |||||||| || || | |||
Sbjct 12578 TCGTTGGAGAAAGTGAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCG 12519
Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCG 48284
|| || || || ||||| || ||||| ||||| || || |||
Sbjct 12518 AACGAACCGGAGAAGAAGATACCTTCGACGGCGGCGAAAGCG 12477
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694557305657600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |