Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq81 118 2e-21 >seq81 Length=91273 Score = 118 bits (130), Expect = 2e-21 Identities = 574/905 (63%), Gaps = 6/905 (1%) Strand=Plus/Minus Query 76325 ATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTT 76384 || ||||| ||||| || || |||||||| || || || || | ||||||||||| Sbjct 57129 ATGATCTCTGTGCAAAGGTTGGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGCTCTTG 57070 Query 76385 TTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATA 76444 ||| | |||||| ||||| | || || | ||||| || |||| || |||| Sbjct 57069 CGGTTGGCAGCGTCCTTGTAAAGGATGAAGGGGTTACCAGTCTCGGTCTGGGACTCGAGG 57010 Query 76445 ATAGATTTCCAGACGACTCT-AGCTTTTATTATAGATTTGTATCGCTTCTCTCTTTCATA 76503 || | | ||||| | ||| ||| || | | ||| | || ||| || || Sbjct 57009 ATGGCGTACCAGA-GCTTCTGAGCCTTGACGGTGCGCTTGGAGCGACCCTCGGCCTCGTA 56951 Query 76504 TTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATT 76563 | || | || ||||| || || || | ||| | | ||| ||||| || || Sbjct 56950 GCGCTCGTAGAGACGCTCAAACTCCTCGCCGTAGCAGTCAGCGAGACCGGGACACTCGTT 56891 Query 76564 CGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTAT 76623 || ||||| | ||||| ||||| | | || |||| ||||| |||||||| || | Sbjct 56890 AGGGCACATGAGCGACCAGTCACCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGAAC 56831 Query 76624 CCATAGAGCAATAAATAGATCTCGGGTTC-TACGTTCTTCATTTCCTGTATTCTTTTTAA 76682 ||| || || || || || |||| | ||| | || | | | || ||||| | Sbjct 56830 CCAGAGGGCGTAGAAGAGCTCACGGGCACGTACCTCCTCCTTACCGTGG-TTCTTGCGGA 56772 Query 76683 GATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCG 76742 | || |||||||| | | ||| || ||||| || || | || || || | |||| | Sbjct 56771 GGTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCAATGTAGATGGCAAAGGCACCGG 56712 Query 76743 GTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTG 76802 | || || ||||| ||||| || | |||| |||||||| || | || | | ||| | Sbjct 56711 GACGCTTGTTACCACCCTGGTCAACGTATCGTGCAGTGTTGTTGAAGACACGGAGCATGG 56652 Query 76803 GAATAATGCCGTTAGATGT-ACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATA 76861 ||| || ||||| | || |||||| || || | ||| || ||| | | || || Sbjct 56651 GAACGATACCGTT-GCTGACACCATTGGTACCGGCAATGTAGGAGCCAGTTCCTCGGATG 56593 Query 76862 TTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAAT 76921 || || || || || || || || | || ||||| | || ||| || | Sbjct 56592 TTGTGGATGTTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGG 56533 Query 76922 GTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATT 76981 ||||| ||||| || || || |||||| ||||| | | ||| ||||| || | Sbjct 56532 GTGTCGTAGATACCGTCGATCGAGTCATCCTTCATGGTGACAAGGAAACACGACGAGAGC 56473 Query 76982 TGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCA 77041 || | || ||| || || || || | || || || || || ||||| | || | Sbjct 56472 TGGGGGTGGGGAGTACCAGCGTTGAAGAGGGTGGGGGAAGCGTGTGTGAAGAACTTCTGC 56413 Query 77042 GAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCG 77101 || | |||||||| || || || | ||| || ||| || || || |||||| Sbjct 56412 GACATGAGATTGTAGGTCTCGATGGCGCTTTCGATGTCCTCGCCGTGGATACCAACAGCG 56353 Query 77102 ACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTAT 77161 |||||||| | ||| ||||| || || || || ||| || || | | ||| Sbjct 56352 ACACGCATGAGCATGTGCTGGGGACGCTCAGCAACCTTGCCGTTAATACGGAGAAGGTAG 56293 Query 77162 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATA 77221 ||| || | || || ||||| || ||||||| ||||| | |||||||| || Sbjct 56292 GATCGCTCGAGGGTCTTGAAACCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATGATT 56233 Query 77222 ACCGA 77226 |||| Sbjct 56232 GCCGA 56228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712819974028800