Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq62 129 1e-24
seq33 116 9e-21
seq144 113 1e-19
>seq62
Length=118391
Score = 129 bits (142), Expect = 1e-24
Identities = 160/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| | |||||| || || || || |||||||||||||| | | ||| |
Sbjct 71192 GAGACGGAGGACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAATCTGAAAGAGTGCG 71251
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| ||||| || || ||||||||||| || | |||||| || | | ||| |||||
Sbjct 71252 GCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCTTC 71311
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || ||||| | || | | |||| ||| ||| |||||||||||
Sbjct 71312 CTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCGACTTCAAGAGT 71371
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| || | |||||| || |||| ||||||
Sbjct 71372 GATGGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 71410
Score = 116 bits (128), Expect = 9e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| || |||||||| ||||| || ||||||||||| || | | || |
Sbjct 71420 GAGACGGAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCG 71479
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || || || |||||||| | ||||||||| | | ||| || ||
Sbjct 71480 GCCATCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGTGGGATACCCTC 71539
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || ||||| || ||||| | || | | |||| || ||| || || || ||
Sbjct 71540 CTTATCCTGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGT 71599
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| ||||| ||||| || |||| ||||||
Sbjct 71600 GATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 71638
>seq33
Length=194022
Score = 116 bits (128), Expect = 9e-21
Identities = 159/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || || ||||| || ||||| || ||||||||||| || | | || |
Sbjct 184333 GAGGCGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCG 184274
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|||||||| || || ||||||||||| || | |||||| || | | || |||||
Sbjct 184273 TCCATCTTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCAGGGGGAATGCCTTC 184214
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || ||||| | || | | |||| ||| ||| || ||||| ||
Sbjct 184213 CTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGT 184154
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || |||||||| || ||||| || |||| |||||| ||
Sbjct 184153 GATGGTCTTGCCCGTAAGGGTCTTAACAAAGATCTGCATCTT 184112
>seq144
Length=29207
Score = 113 bits (124), Expect = 1e-19
Identities = 155/215 (72%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || ||||| || || || ||||| |||||||||||||||| || || | || ||
Sbjct 8397 GAGAACGAGATGGAGGGTCGATTCTTTCTGGATGTTGTAATCGGACAAGGTGCGGCCGTC 8338
Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009
|| || ||||| |||||||| || || | |||||| || | | || ||||||||
Sbjct 8337 CTCAAGCTGCTTT--CCGGCGAAAATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTG 8280
Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069
|| ||||| || ||||| | || | |||| || ||| || || ||||||||
Sbjct 8279 TCCTGAATCTTGGCCTTGACGTTATCGATAGTGTCAGACGACTCAACCTCGAGAGTAATG 8220
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || | ||||| ||||||| ||||||
Sbjct 8219 GTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 8185
Score = 111 bits (122), Expect = 4e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| | || | || ||||| || ||||||||||| || | | ||||
Sbjct 8175 GAGACGGAGGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCG 8116
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|||||||| | ||| || |||||||| || | ||||||||| | | ||| || ||
Sbjct 8115 GCCATCTTCCAACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTC 8056
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || |||||||| ||||| | || | | |||| ||| ||| || || || ||
Sbjct 8055 CTTGTCCTGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGT 7996
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || |||||||| || |||| ||||||
Sbjct 7995 GATGGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCAT 7957
Score = 95.1 bits (104), Expect = 3e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| ||||| |||||||| ||| || ||||||||||| || | | || | ||||||
Sbjct 8852 AGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCATCT 8793
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| | || || || |||||||| | ||||||||| | | ||| || ||||| ||
Sbjct 8792 TCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 8733
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||| || |||||| | || | |||| || ||| ||||| | || || ||
Sbjct 8732 TGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACTTCCAATGTGATGGTC 8673
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| ||||| || |||| |||||
Sbjct 8672 TTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 8641
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153630982055640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |