Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq144 178 3e-39 seq62 178 3e-39 seq33 168 1e-36 seq24 147 5e-30 seq254 86.0 1e-11 >seq144 Length=29207 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | |||||| || ||||| ||||||||||| | Sbjct 8640 ACCACCACGGAGTCGGAGAACGAGGTGAAGCGTGCTCTCCTTTTGAATGTTGTAGTCGGA 8581 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| ||||| ||||| || || |||||||| | ||||| || ||| || Sbjct 8580 GAGTGTTCGGCCGTCCTCAAGTTGCTTTCCAGCAAAGATGAGGCGTTGCTGATCAGGTGG 8521 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| |||||||| || |||||| | ||||| || || |||| ||||| Sbjct 8520 AATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTGTCGATGGTATCAGAAGACTCGAC 8461 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||||| || ||||| || || | || || ||||| |||||||| Sbjct 8460 CTCGAGAGTAATGGTCTTGCCTGTAAGGGTTTTGACGAAGATCTGCAT 8413 Score = 167 bits (184), Expect = 5e-36 Identities = 176/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 ||||||||| || || || || ||||| | || |||||| ||||||||||| || | Sbjct 8412 ACCACCACGAAGACGGAGAACGAGATGGAGGGTCGATTCTTTCTGGATGTTGTAATCGGA 8353 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| |||||||| ||||| || || || ||||| || || | ||| || || || | Sbjct 8352 CAAG-GTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCGGGAG 8294 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||| || |||||||| || ||||| || || ||| ||||||||||||| || | || | Sbjct 8293 GAATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTATCGATAGTGTCAGACGACTCAA 8234 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | |||||||| || ||||| || ||||| ||||| ||||| |||||||| Sbjct 8233 CCTCGAGAGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 8185 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || || ||| || || |||||||||||||| | Sbjct 8184 ACCACCACGGAGACGGAGGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGA 8125 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || |||||||| || | ||||| || || ||||| | ||| || ||||| || Sbjct 8124 GAGGGTTCGGCCATCTTCCAACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGG 8065 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| || || || || || ||| | || || ||||| |||| || || Sbjct 8064 GATACCCTCCTTGTCCTGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCAC 8005 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| |||||||| |||| |||||| || || |||||||| Sbjct 8004 CTCGAGGGTGATGGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCAT 7957 Score = 150 bits (166), Expect = 4e-31 Identities = 171/228 (75%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || | || || || || ||||| || || |||||||||||||| | Sbjct 9096 CCTCCACGGAGACGCAAGACAAGGTGCAAAGTGCTCTCCTTCTGGATGTTGTAGTCCGAG 9037 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC-ACCCGG 282991 || ||||| || || || | || || || |||||||| | ||| || ||||| | || Sbjct 9036 AGGGTGCGACCGTCTTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCCAGGGGG 8977 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||| ||||||||||||| ||||| || || ||| | || || |||||||| | || || Sbjct 8976 AATATCCTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGACGACTCAAC 8917 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| || || | ||||| || || |||||||| Sbjct 8916 CTCGAGGGTGATCGTCTTTCCAGTGAGCGTCTTGACAAAGATCTGCAT 8869 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || |||| ||||| || || || | ||||| || || |||||||||||||| | Sbjct 8868 ACCTCCGCGCAAACGAAGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGA 8809 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| ||||| || | || || || |||||||| | ||| || |||||| || Sbjct 8808 AAGGGTGCGACCATCTTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCAGGGGG 8749 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| || ||||| || || || | || || |||||||| | ||||| Sbjct 8748 GATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGAC 8689 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||||| ||||| || || | ||||| || || || ||||| Sbjct 8688 TTCCAATGTGATGGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 8641 >seq62 Length=118391 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| ||| | ||| ||| || ||||||||||| || | Sbjct 71183 ACCACCACGGAGACGGAGGACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAATCTGA 71242 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| || || || || || ||||| ||||| | || || || || || Sbjct 71243 AAGAGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGG 71302 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || |||||||| |||||||| || || ||| | ||||| |||||||||| ||||| Sbjct 71303 GATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCGAC 71362 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| |||||||| ||||| || ||||||||||| || || |||||||| Sbjct 71363 TTCAAGAGTGATGGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 71410 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || || || || | ||| || || |||||||||||||| | Sbjct 71411 ACCACCGCGGAGACGGAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGA 71470 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || |||||||| | ||| || |||||| || Sbjct 71471 GAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGTGG 71530 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||| || || ||||| || || ||| | || || |||||||| | || || Sbjct 71531 GATACCCTCCTTATCCTGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAAC 71590 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | ||||| || || |||||||| Sbjct 71591 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 71638 >seq33 Length=194022 Score = 168 bits (186), Expect = 1e-36 Identities = 176/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || || || | || || || |||||||||||||| | Sbjct 184342 ACCACCACGGAGGCGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 184283 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| ||||| || || || || ||||| ||||| | ||| || || ||| || Sbjct 184282 AAGGGTGCGTCCATCTTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCAGGGGG 184223 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| |||||||| || || ||| | ||||| |||||||||| || || Sbjct 184222 AATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCAC 184163 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || ||||| ||||| ||||| | |||||||| || |||||||| || Sbjct 184162 CTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTAACAAAGATCTGCATCTT 184112 >seq24 Length=214592 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | || || || |||||||||||||| | Sbjct 73367 ACCACCACGGAGACGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 73426 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| ||||| || || || ||||| ||||| | ||| || ||||| || Sbjct 73427 AAGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCGGGGGG 73486 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| || || ||| | ||||| ||||| |||| || || Sbjct 73487 GATACCCTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAAGACTCCAC 73546 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 || || ||||| |||||||| || Sbjct 73547 CTCAAGGGTGATGGTCTTACCTGT 73570 >seq254 Length=1289 Score = 86.0 bits (94), Expect = 1e-11 Identities = 113/153 (74%), Gaps = 4/153 (3%) Strand=Plus/Minus Query 109934 AGATTGCAACATCATCAAATTGCGGGAACCCCCTAAAGCATATGATACCAAGGTTGATTG 109993 || |||| ||| ||||||||||||| || |||||||| | |||||||| | || Sbjct 409 AGCTTGCGACACTATCAAATTGCGGGGACGTCCTAAAGCTTTCAATACCAAGCCGGCGTG 350 Query 109994 TGAAAGCATCAGCTGGCCGAG--AACAGAACTCGGGTATGGTAAAAATTCATATGATGCC 110051 || || | |||||||| || || || |||||||||||||||| | |||| Sbjct 349 GAAACACAGTCGGTGGCCGAGTTAATAGCCCT-GGGTATGGTAAAAATTTGAAAGATGTT 291 Query 110052 ACAATGGGCAATCCGCAGCCAAGCCTCTAAAGG 110084 ||||||| |||||||||||||| | ||||||| Sbjct 290 ACAATGGATAATCCGCAGCCAAGTC-CTAAAGG 259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046566998317360