Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq144 178 3e-39
seq62 178 3e-39
seq33 168 1e-36
seq24 147 5e-30
seq254 86.0 1e-11
>seq144
Length=29207
Score = 178 bits (196), Expect = 3e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || || || || | |||||| || ||||| ||||||||||| |
Sbjct 8640 ACCACCACGGAGTCGGAGAACGAGGTGAAGCGTGCTCTCCTTTTGAATGTTGTAGTCGGA 8581
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||| ||||| ||||| || || |||||||| | ||||| || ||| ||
Sbjct 8580 GAGTGTTCGGCCGTCCTCAAGTTGCTTTCCAGCAAAGATGAGGCGTTGCTGATCAGGTGG 8521
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || |||||||| |||||||| || |||||| | ||||| || || |||| |||||
Sbjct 8520 AATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTGTCGATGGTATCAGAAGACTCGAC 8461
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||||||| || ||||| || || | || || ||||| ||||||||
Sbjct 8460 CTCGAGAGTAATGGTCTTGCCTGTAAGGGTTTTGACGAAGATCTGCAT 8413
Score = 167 bits (184), Expect = 5e-36
Identities = 176/229 (77%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930
||||||||| || || || || ||||| | || |||||| ||||||||||| || |
Sbjct 8412 ACCACCACGAAGACGGAGAACGAGATGGAGGGTCGATTCTTTCTGGATGTTGTAATCGGA 8353
Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990
|||| |||||||| ||||| || || || ||||| || || | ||| || || || |
Sbjct 8352 CAAG-GTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCGGGAG 8294
Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
|||| || |||||||| || ||||| || || ||| ||||||||||||| || | || |
Sbjct 8293 GAATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTATCGATAGTGTCAGACGACTCAA 8234
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| |||||||| || ||||| || ||||| ||||| ||||| ||||||||
Sbjct 8233 CCTCGAGAGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 8185
Score = 159 bits (176), Expect = 7e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || |||| || || ||| || || |||||||||||||| |
Sbjct 8184 ACCACCACGGAGACGGAGGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGA 8125
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || |||||||| || | ||||| || || ||||| | ||| || ||||| ||
Sbjct 8124 GAGGGTTCGGCCATCTTCCAACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGG 8065
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||| || || || || || ||| | || || ||||| |||| || ||
Sbjct 8064 GATACCCTCCTTGTCCTGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCAC 8005
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| |||||||| |||| |||||| || || ||||||||
Sbjct 8004 CTCGAGGGTGATGGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCAT 7957
Score = 150 bits (166), Expect = 4e-31
Identities = 171/228 (75%), Gaps = 1/228 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| ||||| || || | || || || || ||||| || || |||||||||||||| |
Sbjct 9096 CCTCCACGGAGACGCAAGACAAGGTGCAAAGTGCTCTCCTTCTGGATGTTGTAGTCCGAG 9037
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC-ACCCGG 282991
|| ||||| || || || | || || || |||||||| | ||| || ||||| | ||
Sbjct 9036 AGGGTGCGACCGTCTTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCCAGGGGG 8977
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||| ||||||||||||| ||||| || || ||| | || || |||||||| | || ||
Sbjct 8976 AATATCCTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGACGACTCAAC 8917
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||||||||| || || | ||||| || || ||||||||
Sbjct 8916 CTCGAGGGTGATCGTCTTTCCAGTGAGCGTCTTGACAAAGATCTGCAT 8869
Score = 145 bits (160), Expect = 2e-29
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| || |||| ||||| || || || | ||||| || || |||||||||||||| |
Sbjct 8868 ACCTCCGCGCAAACGAAGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGA 8809
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||| ||||| || | || || || |||||||| | ||| || |||||| ||
Sbjct 8808 AAGGGTGCGACCATCTTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCAGGGGG 8749
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| || ||||| || || || | || || |||||||| | |||||
Sbjct 8748 GATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGAC 8689
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| | ||||| ||||| || || | ||||| || || || |||||
Sbjct 8688 TTCCAATGTGATGGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 8641
>seq62
Length=118391
Score = 178 bits (196), Expect = 3e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || |||| ||| | ||| ||| || ||||||||||| || |
Sbjct 71183 ACCACCACGGAGACGGAGGACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAATCTGA 71242
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||| || || || || || ||||| ||||| | || || || || ||
Sbjct 71243 AAGAGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGG 71302
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| || |||||||| |||||||| || || ||| | ||||| |||||||||| |||||
Sbjct 71303 GATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCGAC 71362
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| |||||||| ||||| || ||||||||||| || || ||||||||
Sbjct 71363 TTCAAGAGTGATGGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 71410
Score = 154 bits (170), Expect = 3e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || || || || | ||| || || |||||||||||||| |
Sbjct 71411 ACCACCGCGGAGACGGAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGA 71470
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| || || || || |||||||| | ||| || |||||| ||
Sbjct 71471 GAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGTGG 71530
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||| || || ||||| || || ||| | || || |||||||| | || ||
Sbjct 71531 GATACCCTCCTTATCCTGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAAC 71590
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || || | ||||| || || ||||||||
Sbjct 71591 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 71638
>seq33
Length=194022
Score = 168 bits (186), Expect = 1e-36
Identities = 176/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| || || || || | || || || |||||||||||||| |
Sbjct 184342 ACCACCACGGAGGCGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 184283
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||| ||||| || || || || ||||| ||||| | ||| || || ||| ||
Sbjct 184282 AAGGGTGCGTCCATCTTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCAGGGGG 184223
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || |||||||| |||||||| || || ||| | ||||| |||||||||| || ||
Sbjct 184222 AATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCAC 184163
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || ||||| ||||| ||||| | |||||||| || |||||||| ||
Sbjct 184162 CTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTAACAAAGATCTGCATCTT 184112
>seq24
Length=214592
Score = 147 bits (162), Expect = 5e-30
Identities = 155/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || || || || | || || || |||||||||||||| |
Sbjct 73367 ACCACCACGGAGACGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 73426
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||| ||||| || || || ||||| ||||| | ||| || ||||| ||
Sbjct 73427 AAGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCGGGGGG 73486
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||| |||||||| || || ||| | ||||| ||||| |||| || ||
Sbjct 73487 GATACCCTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAAGACTCCAC 73546
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
|| || ||||| |||||||| ||
Sbjct 73547 CTCAAGGGTGATGGTCTTACCTGT 73570
>seq254
Length=1289
Score = 86.0 bits (94), Expect = 1e-11
Identities = 113/153 (74%), Gaps = 4/153 (3%)
Strand=Plus/Minus
Query 109934 AGATTGCAACATCATCAAATTGCGGGAACCCCCTAAAGCATATGATACCAAGGTTGATTG 109993
|| |||| ||| ||||||||||||| || |||||||| | |||||||| | ||
Sbjct 409 AGCTTGCGACACTATCAAATTGCGGGGACGTCCTAAAGCTTTCAATACCAAGCCGGCGTG 350
Query 109994 TGAAAGCATCAGCTGGCCGAG--AACAGAACTCGGGTATGGTAAAAATTCATATGATGCC 110051
|| || | |||||||| || || || |||||||||||||||| | ||||
Sbjct 349 GAAACACAGTCGGTGGCCGAGTTAATAGCCCT-GGGTATGGTAAAAATTTGAAAGATGTT 291
Query 110052 ACAATGGGCAATCCGCAGCCAAGCCTCTAAAGG 110084
||||||| |||||||||||||| | |||||||
Sbjct 290 ACAATGGATAATCCGCAGCCAAGTC-CTAAAGG 259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046566998317360
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