Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq144 134 1e-26
seq62 129 4e-25
seq33 127 1e-24
seq24 104 2e-17
seq11049 89.7 4e-13
>seq144
Length=29207
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||||||||||||||||||||| |||||||| |||| |||| || |||| ||
Sbjct 8621 ACGAGGTGAAGCGTGCTCTCCTTTTGAATGTTGTAGTCGGAGAGTGTTCGGCCGTCCTCA 8562
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| || |||||||| | || |||||||| | || | |||||||| |||
Sbjct 8561 AGTTGCTTTCCAGCAAAGATGAGGCGTTGCTGATCAGGTGGAATGCCTTCCTTGTCCTGG 8502
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | ||||| || | || || ||||| | ||||| |||||
Sbjct 8501 ATCTTGGCCTTTACGTTGTCGATGGTATCAGAAGACTCGACCTCGAGAGTAATGGTCTTG 8442
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || ||||| || |||||||| |||||
Sbjct 8441 CCTGTAAGGGTTTTGACGAAGATCTGCAT 8413
Score = 134 bits (148), Expect = 1e-26
Identities = 158/212 (75%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||| |||||||| ||||||||||| ||||||||||| || | || ||| | || ||
Sbjct 8850 CACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCATCTTC 8791
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|| |||||| || |||||||| | ||||||||| || | || | || ||||| |||
Sbjct 8790 CAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTG 8731
Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| ||| || ||| | || ||||| | ||| || || |||| || || |||
Sbjct 8730 AATCTTGGCCTTGACATTGT--CAATCGTGTCCGAGGACTCGACTTCCAATGTGATGGTC 8673
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||| ||||| || |||||||||||
Sbjct 8672 TTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 8641
Score = 122 bits (134), Expect = 6e-23
Identities = 156/214 (73%), Gaps = 1/214 (0%)
Strand=Plus/Minus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184
||| || ||||| | ||||||||||| ||||||||||| || | ||| ||| ||||
Sbjct 9082 CAAGACAAGGTGCAAAGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCGTC 9023
Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT-CTGAAGGCACACCTTCCTTTT 44243
|||| |||||| || |||||||| | ||||||||| | | | || | | | ||||| |
Sbjct 9022 TTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCCAGGGGGAATATCCTCCTTGT 8963
Query 44244 CCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303
| ||||| ||| | | | |||||||| | || || ||||| | || ||||
Sbjct 8962 CTTGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGACGACTCAACCTCGAGGGTGATCG 8903
Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||| ||||| ||||| || ||||| |||||
Sbjct 8902 TCTTTCCAGTGAGCGTCTTGACAAAGATCTGCAT 8869
Score = 114 bits (126), Expect = 9e-21
Identities = 142/192 (74%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 44147 TCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|| || |||||||||||||||| | || || || |||| || |||||||| ||||| ||
Sbjct 8375 TCTTTCTGGATGTTGTAATCGGACAAGGTGCGGC-CGTCCTCAAGCTGCTTTCCGGCGAA 8317
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
|| | |||||||||||| | ||| | |||||||| ||| ||||| ||| | |
Sbjct 8316 AATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGTT 8257
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| || ||||| | || || ||||| | ||||| ||||| || || | |||||| ||
Sbjct 8256 ATCGATAGTGTCAGACGACTCAACCTCGAGAGTAATGGTCTTGCCGGTCAAGGTCTTGAC 8197
Query 44326 GAAGATTTGCAT 44337
|||||| |||||
Sbjct 8196 GAAGATCTGCAT 8185
Score = 105 bits (116), Expect = 5e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| | ||| |||||| ||||||||||| || | ||| || | || |||
Sbjct 8165 ACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCATCTTCC 8106
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
| ||| || || || ||||| | ||||||||| || | ||| | ||| ||||| |||
Sbjct 8105 AACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGA 8046
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
|| || ||| | | | |||||||||| || |||||||| | || || |||||
Sbjct 8045 ATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTA 7986
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339
|| || || ||||| || ||||| |||||||
Sbjct 7985 CCGGTCAGAGTCTTGACAAAGATCTGCATGA 7955
>seq62
Length=118391
Score = 129 bits (142), Expect = 4e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| ||| |||||| ||||||||||| || | ||| ||| | || ||
Sbjct 71430 ACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTCG 71489
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || |||||||| | ||||||||| || | || | ||| ||||| |||
Sbjct 71490 AGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGTGGGATACCCTCCTTATCCTGA 71549
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||| | ||| || ||||| | || || |||||
Sbjct 71550 ATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTG 71609
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||||||||| || ||||| |||||
Sbjct 71610 CCGGTGAGGGTCTTGACAAAGATCTGCAT 71638
Score = 107 bits (118), Expect = 1e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||||| ||| ||||| |||||||||||||| | || ||| |||| ||
Sbjct 71202 ACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAATCTGAAAGAGTGCGGCCGTCTTCG 71261
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| ||||| | ||||||||||| | ||| | |||||||| |||
Sbjct 71262 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCTTCCTTGTCCTGG 71321
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||| | || || || || | || || |||||
Sbjct 71322 ATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCGACTTCAAGAGTGATGGTCTTG 71381
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | ||||| || ||||| |||||
Sbjct 71382 CCAGTCAAAGTCTTGACAAAGATCTGCAT 71410
>seq33
Length=194022
Score = 127 bits (140), Expect = 1e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||| |||||||| || |||||| ||||||||||| || | || ||| | || ||
Sbjct 184324 CACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGTCCATCTTC 184265
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||| ||||| | |||||||||||| | || | |||||||| |||
Sbjct 184264 GAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTG 184205
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | | |||||||| | || |||||||| | || || |||||
Sbjct 184204 GATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTT 184145
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| |||||||| || ||||| |||||
Sbjct 184144 GCCCGTAAGGGTCTTAACAAAGATCTGCAT 184115
>seq24
Length=214592
Score = 104 bits (114), Expect = 2e-17
Identities = 136/186 (73%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| || |||||| ||||||||||| || | || ||| |||| ||
Sbjct 73386 ACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 73445
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| ||||| | ||||||||| || | || | ||| ||||| |||
Sbjct 73446 AGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGG 73505
Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| || | || ||| | |||||||||| || |||||||| | || || |||||
Sbjct 73506 ATCTT-GGCCTTAACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTCTT 73564
Query 44308 TCCCGT 44313
|| ||
Sbjct 73565 ACCTGT 73570
>seq11049
Length=215
Score = 89.7 bits (98), Expect = 4e-13
Identities = 90/117 (77%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | |||| |||||| |||||||| || |||||| ||||||||||| ||
Sbjct 127 CATACCACCACGAAGTCGCAACACAAGGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTC 68
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
| ||| ||| |||| || |||||||| || |||||||| | ||||||||| ||
Sbjct 67 CGAGAGCGTGCGGCCGTCTTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTC 11
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359934066002280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |