Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq62 150 4e-31
seq33 147 5e-30
seq144 143 6e-29
seq24 131 4e-25
>seq62
Length=118391
Score = 150 bits (166), Expect = 4e-31
Identities = 154/201 (77%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || ||| | || || || || ||||| || || || || || |||
Sbjct 71407 CAGATCTTTGTCAAGACTTTGACTGGCAAGACCATCACTCTTGAAGTCGAGTCTTCGGAC 71348
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| ||||| |||||||| || |||||
Sbjct 71347 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGATCAGCAG 71288
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||||||||| || | |||||| | ||||| ||| ||
Sbjct 71287 CGCCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGCACTCTTTCAGATTACAACATC 71228
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| || ||||| ||||| |||
Sbjct 71227 CAGAAGGAATCCACACTTCAT 71207
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || ||||| || || || |||||||||||||| || ||| |||
Sbjct 71635 CAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGAC 71576
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| ||||||||||| || || || ||||| || ||||||||
Sbjct 71575 ACCATTGACAACGTCAAGGCCAAGATTCAGGATAAGGAGGGTATCCCACCTGACCAGCAG 71516
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| |||||||| || || || |||||||| ||||| | || || | || || ||| ||
Sbjct 71515 CGTCTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTCTCGGACTACAACATC 71456
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 71455 CAGAAGGAGTCCACTCTTCACCTCGT 71430
>seq33
Length=194022
Score = 147 bits (162), Expect = 5e-30
Identities = 156/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || || || || || || |||||||| |||||||| || |||
Sbjct 184118 CAGATCTTTGTTAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTGGAGTCTTCGGAC 184177
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| ||||| || || || || |||||
Sbjct 184178 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAGCAG 184237
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||||||||||||| | || ||| | || || ||| ||
Sbjct 184238 CGTCTCATCTTCGCCGGTAAGCAGCTCGAAGATGGACGCACCCTTTCGGACTACAACATC 184297
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 184298 CAGAAGGAGTCGACCCTTCACCTCGT 184323
>seq144
Length=29207
Score = 143 bits (158), Expect = 6e-29
Identities = 158/208 (76%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || | || || || || || || |||||||| || || |||
Sbjct 8188 CAGATCTTCGTCAAGACCTTGACCGGCAAGACCATTACTCTCGAGGTTGAGTCGTCTGAC 8247
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||||||||| ||||| || ||||| || |||||
Sbjct 8248 ACTATCGATAACGTCAAGGCCAAGATTCAGGACAAGGAAGGCATTCCTCCCGATCAGCAG 8307
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| || || ||||||||||| ||||| || || || | || |||| ||||||| ||| |
Sbjct 8308 CGTCTCATTTTCGCCGGAAAGCAGCTTGAGGACGGCCGCAC-CTTGTCCGATTACAACAT 8366
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTT 178130
||| |||||||| || || ||||| |||
Sbjct 8367 CCAGAAAGAATCGACCCTCCATCTCGTT 8394
Score = 141 bits (156), Expect = 2e-28
Identities = 155/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || ||||| || || || || ||||||||||||||||| || |||
Sbjct 7960 CAGATCTTTGTCAAGACTCTGACCGGTAAGACCATCACCCTCGAGGTGGAGTCTTCCGAC 8019
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| || ||||||||||| || || |||||||| ||||||||
Sbjct 8020 ACCATTGACAACGTCAAGGCCAAAATTCAGGACAAGGAGGGTATCCCTCCCGACCAGCAG 8079
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || |||||| | |||||||| | || || | || || ||| ||
Sbjct 8080 CGTCTCATCTTCGCTGGTAAACAGTTGGAAGATGGCCGAACCCTCTCGGACTACAACATC 8139
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || |||| ||||
Sbjct 8140 CAGAAGGAGTCCACCTTGCA-CTTG 8163
Score = 123 bits (136), Expect = 6e-23
Identities = 151/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || ||||||||||| || ||||| | || || || ||| |||
Sbjct 8644 CAAATCTTTGTCAAGACACTCACAGGAAAGACCATCACATTGGAAGTCGAGTCCTCGGAC 8703
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||||||||| || || ||||| || ||||||||
Sbjct 8704 ACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCTGACCAGCAG 8763
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| |||||||| || || || ||| | |||||||| | || ||| | || || ||| ||
Sbjct 8764 CGTCTTATCTTTGCAGGTAAGCAGTTGGAAGATGGTCGCACCCTTTCGGACTACAACATC 8823
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || |||||
Sbjct 8824 CAGAAGGAGAGCACTCTTCACCTTGT 8849
Score = 122 bits (134), Expect = 2e-22
Identities = 158/217 (73%), Gaps = 1/217 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || ||||| ||||| ||||||||||||||||| || || |||
Sbjct 8872 CAGATCTTTGTCAAGACGCTCACTGGAAAGACGATCACCCTCGAGGTTGAGTCGTCGGAC 8931
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAG-GAATCCCTCCGGACCAGCA 178042
||||| || |||||||| |||||||| ||||| || | | |||| | |||||||||
Sbjct 8932 ACCATTGACAACGTCAAGGCCAAGATTCAAGACAAGGAGGATATTCCCCCTGGACCAGCA 8991
Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102
|| |||||||| || || || ||| | ||||| || | || || | || || ||| |
Sbjct 8992 GCGTCTTATCTTTGCAGGTAAGCAGTTGGAAGACGGTCGCACCCTCTCGGACTACAACAT 9051
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
||| || || || |||| ||||| ||| | |||
Sbjct 9052 CCAGAAGGAGAGCACTTTGCACCTTGTCTTGCGTCTC 9088
>seq24
Length=214592
Score = 131 bits (144), Expect = 4e-25
Identities = 140/185 (76%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004
||||| || || |||||||| |||||||| || ||||||||||| ||||| ||
Sbjct 73570 ACAGGTAAGACCATCACCCTTGAGGTGGAGTCTTCCGACACCATCGACAACGTTAAGGCC 73511
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
||||| |||||||| || || ||||| || |||||||| || || ||||||||||| ||
Sbjct 73510 AAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGTAAG 73451
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
|||||||| || || | || ||| | || || ||| |||| || || || || || ||
Sbjct 73450 CAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCAC 73391
Query 178125 CTTGT 178129
|| ||
Sbjct 73390 CTCGT 73386
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203533171170960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |