Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_000896.1 Length=43785 Score E Sequences producing significant alignments: (Bits) Value seq115941 100 8e-17 >seq115941 Length=788 Score = 100 bits (110), Expect = 8e-17 Identities = 140/195 (72%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 25081 CCACTATACTTCGGTGACTTAAAACAAGGCATTACTTTATTCGACCGTCAACAAATGCAA 25140 ||| | || || ||||| || ||||||| | ||||||| || ||||||||||||||| Sbjct 421 CCATTGTATTTTGGTGATTTGAAACAAGCCGTTACTTTGTTTGACCGTCAACAAATG-TC 479 Query 25141 ATTGATACCACTAATGTCGGCGCTGGTTCGTTCGAACACGATACTACTAAGCTTCGTTTT 25200 |||| || | || |||| | |||| |||| ||| || |||||||| | ||| || Sbjct 480 ATTGCTATCTACCATATCGGTGGTGGTGCGTTTGAAACTGACACTACTAAAGTACGTGTT 539 Query 25201 ATTGACAGATTTGACGTTCAATTAATTGATGATGGTGCATTTGCAGCTGCTTCATTTAAG 25260 |||||| | ||||| ||| | || |||| | || |||| | | ||||||||||| Sbjct 540 ATTGACCGTTTTGATGTTGTAGCAACTGATACAGAAGCGTTTGTACCAGCTTCATTTAAA 599 Query 25261 ACTGTTGCTAACCAA 25275 | | ||| ||||| Sbjct 600 GCCATCGCTGACCAA 614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139773791104200