Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq28556 96.9 3e-15 seq29103 91.5 1e-13 >seq28556 Length=388 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || ||||||||||||||||| || || | ||||| || | || |||||||| || || Sbjct 86 GTAGACTCCTTTTGAATGTTGTAATCAGAGAGGGTACGGCCATCTTCCAGCTGCTTTCCG 145 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | |||||||||| || | |||||| ||||| |||||| || Sbjct 146 GCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCTTTGTCCTGGATCTTCGACTTG 205 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | ||||| | ||| ||| | || |||||||||||||| | || Sbjct 206 ACATTGTCAATGGTATCCGAAGACTCTACTTCTAGCGTGATGGTCTTGCCGGTGAGGGTC 265 Query 21159 TTGACAAATATTTGCATT 21176 ||||| || ||||||||| Sbjct 266 TTGACGAAGATTTGCATT 283 >seq29103 Length=1863 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/206 (71%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAA-GTGGACTCCTTTTGAATGTTATAGTCC 21005 |||| ||||| || | || |||| || | || ||||||||||||||||| ||||| Sbjct 1060 TTCCACCTCGGAGACGAAGAACCAAGTGGACGCGTCGACTCCTTTTGAATGTTGTAGTCT 1119 Query 21006 GCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACG 21065 || || || || ||||||| ||||| || || ||| | || || | |||||||||| | Sbjct 1120 GCAAGAGTGCGGCCGTCCTCAAGCTGCTT-CCGGCA-AGATCAGGCGCTGCTGGTCCGGG 1177 Query 21066 GGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCC 21125 || | ||| |||||||| |||||| || || | | ||| || || || ||| Sbjct 1178 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCGGAGGACTCG 1237 Query 21126 GTTTCCACGGTAATGGTCTTGCCGGT 21151 || | ||| ||||||||||| || Sbjct 1238 ACCTCAAGGGTGATGGTCTTGCCCGT 1263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421588639194800