Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_001884.1 Length=134416 Score E Sequences producing significant alignments: (Bits) Value seq84545 98.7 9e-16 >seq84545 Length=668 Score = 98.7 bits (108), Expect = 9e-16 Identities = 190/278 (68%), Gaps = 8/278 (3%) Strand=Plus/Plus Query 123921 AAGAAGATGTAATGAAATATGGTCTTTATCATTCCTATAGACAAGCTATTGCGCCTACGG 123980 ||| ||| || ||||| ||||||| || ||| | ||| | | || || ||||| || | Sbjct 296 AAGCAGACGTGATGAAGCATGGTCTGTACCATGCATATCGTCTGGCAATCGCGCCAACCG 355 Query 123981 GAAGCATCTCATATGTTCAATCATCTACAGCAGGTGTAATGCCAATTATGGAGAGAATTG 124040 |||||| || ||| | ||| | ||| | | || |||||||| ||||| ||| | Sbjct 356 CAAGCATTTCGTATATCCAAAATGCAACATCCAGCGTTATGCCAATCGTGGAGCAAATCG 415 Query 124041 AGGAACGTACATACGGAAACAGTAAGACATATTATCCGATGCCAGGTTTATCGGCT-CAG 124099 || ||| || || | ||| | || || ||||| ||||| ||| || ||| Sbjct 416 AGACACGCACGTATGCGAACTCGACAACGTACTATCCAATGCC----TTACATGCAGCAG 471 Query 124100 AATTGGTTCTTCTATAAGGAA---GCATACGACATGGATATGTTTAAGGTAGTTGATCTT 124156 || |||||||| | || |||||| | |||||| ||| ||||| | ||||| Sbjct 472 GATAACTTCTTCTACTACAAATCGGCATACCAGATGGATCAGTTCAAGGTGCTCGATCTG 531 Query 124157 ATTGCAACAATTCAGCAGCACGTCGACCAAGGGATTTC 124194 ||||| ||||||||||||||| || ||||| || || Sbjct 532 ATTGCTGAAATTCAGCAGCACGTGGATCAAGGCATCTC 569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429323536399100