Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_002667.1 Length=41834 Score E Sequences producing significant alignments: (Bits) Value seq115941 134 4e-27 >seq115941 Length=788 Score = 134 bits (148), Expect = 4e-27 Identities = 153/204 (75%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 22970 CCACTTTACTATGGAGATATGTCGCAAGCTATTACATTGTTTGACCGTGAAAACATGTCA 23029 ||| | || | ||| ||| || ||||| |||| |||||||||||| || | |||||| Sbjct 421 CCATTGTATTTTGGTGATTTGAAACAAGCCGTTACTTTGTTTGACCGTCAACAAATGTCA 480 Query 23030 TTACTTCCAACAAATATTGGTGCTGGTGCATTTGAAACTGATACTACTAAAATTCGTGTA 23089 || || | || | ||| |||| |||||| ||||||||||| ||||||||| | ||||| Sbjct 481 TTGCTATCTACCA-TATCGGTGGTGGTGCGTTTGAAACTGACACTACTAAAGTACGTGTT 539 Query 23090 ATCGATCGCTTCGATGTTAAAGCTACTGACTCAGAAGCTTTAGTTGCTGGTTCATTTTCT 23149 || || || || |||||| ||| ||||| ||||||| || || | | ||||||| Sbjct 540 ATTGACCGTTTTGATGTTGTAGCAACTGATACAGAAGCGTTTGTACCAGCTTCATTTAAA 599 Query 23150 GCAATTGCAGACCAAGTAGGTAAC 23173 || || || |||||| ||||||| Sbjct 600 GCCATCGCTGACCAAAAAGGTAAC 623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133540251285600