Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq2641 104 2e-17 >seq2641 Length=263 Score = 104 bits (114), Expect = 2e-17 Identities = 148/207 (71%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || |||| ||| |||| || || || |||||||| ||||||||||| ||||| Sbjct 247 TCCACCACGAAGTCGAAGAACCAGATGCAGAGTAGATTCTTTCTGAATGTTGTAATCGGC 188 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | ||| || ||||||||| || || || ||| |||| |||| ||||||||| ||| Sbjct 187 AAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAGATGAGTCGTTGTTGATCGGGGGG 128 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | || ||||| || |||||| | ||||| | | | ||| || | || Sbjct 127 AATACCCTCCTTGTCTTGAATTTGGT-TTTGACATTGTCGATAGTATCCGAAGATTCAAC 69 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAA 18304 ||||| |||||| | ||||||||||| Sbjct 68 TTCAAGGGTGATAGTCTTGCCGGTCAA 42 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378741589873500