Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_004066.1 Length=36798 Score E Sequences producing significant alignments: (Bits) Value seq30831 365 1e-96 >seq30831 Length=459 Score = 365 bits (404), Expect = 1e-96 Identities = 323/400 (81%), Gaps = 15/400 (4%) Strand=Plus/Minus Query 33329 AGAAATTACAAACCCGGAGATAAATATACAATG-AGTATGGACGTTATGTTCACAAGTTG 33387 ||| |||| |||||||| ||||| || |||||| ||||||| |||||||||||||||||| Sbjct 459 AGAGATTATAAACCCGGCGATAAGTACACAATGTAGTATGG-CGTTATGTTCACAAGTTG 401 Query 33388 GAATCTCCCTGCTGGAACAACTATTACTGAGTTTTGGTTGGGTCAGCGATACTTT----- 33442 ||||||||||||||||||| | || ||||||||| | |||||||||||| | Sbjct 400 GAATCTCCCTGCTGGAACACATCTTGACGAGTTTTGGATTGGTCAGCGATACACTCATGG 341 Query 33443 -GGAGG------CTCAGGGAAGCATATATGTTCTATTGATTTACCTAAAGACCCTAGCAA 33495 ||||| |||| |||||| ||| |||| |||||| ||||||||||||||||| || Sbjct 340 CGGAGGATTATACTCATGGAAGCGTATTTGTTTTATTGAATTACCTAAAGACCCTAGTAA 281 Query 33496 AATGTTGAACCAATGGATAAGAATAACACAAACTTCAACGATACCACCTTATGATGACCC 33555 |||| ||||||||||||||| |||||||||||| ||||||||||| || ||||| ||||| Sbjct 280 AATGCTGAACCAATGGATAAAAATAACACAAACGTCAACGATACCTCCGTATGAAGACCC 221 Query 33556 TTCTGTTGGTACTCAAGCAATCTTTACTGTTGGtttttttGGTCCGAGTGAAGGTAGCTT 33615 || | || |||||||||||| | ||| |||||||||||||||||| || Sbjct 220 CGCTATCAACACAGAAGCAATCTTTATGACTAAATTTACTGGTCCGAGTGAAGGTAGTTT 161 Query 33616 CACGATTAGAGTTAGAAAGCCAAAACAAGAAGAAGGCTCAGTAGCTACTCCACACATGCC 33675 |||||| || ||||||| |||||||||||| ||||| | | || |||||| ||||||| Sbjct 160 CACGATAAGGATTAGAAATCCAAAACAAGAACAAGGCGAAATCGCCACTCCATACATGCC 101 Query 33676 CTCAGCTAGCGAAGTAACAACTGCTGACTGGCCGAAGTTT 33715 ||||||||||||| ||||||||||||| || |||||| Sbjct 100 ATCAGCTAGCGAAGCCACAACTGCTGACTATCC-AAGTTT 62 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117449986536000