Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq2641 93.3 4e-14 seq28556 84.2 2e-11 >seq2641 Length=263 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/191 (72%), Gaps = 5/191 (3%) Strand=Plus/Minus Query 142975 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGA--GTCT 143032 ||| | ||| | ||||||||||| || |||||||||||| || | | |||| ||| Sbjct 229 AACCAGATGCAGAGTAGATTCTTTCTGAATGTTGTAATCG-GCA-AGGGTTCGACCATCT 172 Query 143033 TCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 143092 || | || ||||||||| |||| || ||||| |||||||| || || || || ||||| Sbjct 171 TCCAACTGCTTACCAGCAAAGATGAGTCGTTGTTGATCGGGGGGAATACCCTCCTTGTCT 112 Query 143093 GTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTC 143152 ||||| | ||| | | || | || |||| | ||| ||||||| || | ||| Sbjct 111 TGAATTTGGT-TTTGACATTGTCGATAGTATCCGAAGATTCAACTTCAAGGGTGATAGTC 53 Query 143153 TTGCCGGTCAA 143163 ||||||||||| Sbjct 52 TTGCCGGTCAA 42 >seq28556 Length=388 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035 || || |||| ||||| || ||||| ||||||||||| | || | ||||| Sbjct 74 ACCAAGTGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAGAGGGTACGGCCATCTTCC 133 Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095 || || || || || |||| ||||| ||||| || ||||| |||||||||||||| Sbjct 134 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCTTTGTCCTGG 193 Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155 || || || | | || | || |||| | |||||||| | || | |||||| Sbjct 194 ATCTTCGACTTGACATTGTCAATGGTATCCGAAGACTCTACTTCTAGCGTGATGGTCTTG 253 Query 143156 CCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| | || || ||||| |||||||| Sbjct 254 CCGGTGAGGGTCTTGACGAAGATTTGCAT 282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506188600296000