Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_004456.1 Length=43198 Score E Sequences producing significant alignments: (Bits) Value seq60335 89.7 1e-13 >seq60335 Length=1976 Score = 89.7 bits (98), Expect = 1e-13 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 12704 AAAACATTGCCAGATAATTCTGTTGACCTTATTGCCACTGACCCACCTTACTTTCGAG-T 12762 ||||| | ||||| | |||||||||||| || ||||| ||||||||||| || || | | Sbjct 886 AAAACCCTTCCAGACAGTTCTGTTGACCTGATCGCCACCGACCCACCTTATTTCCGTGTT 827 Query 12763 AAAGCAAGATGCCKGGGATAACCAGTGGGATGATGAGACAGAGTTCCTGGCGTGGCTTGA 12822 ||||| | | ||||||| |||||| | |||| | | | ||| |||||||| | Sbjct 826 AAAGCGTG-TAAATGGGATAATCAGTGGAAGAGTGAGGAACATTACCTTTCGTGGCTTTA 768 Query 12823 CGATATTCTCTTTGACTTATGGCGAATATTGAAGCCATCGGGCAGTTTGTATCTATTTTG 12882 || |||| | || || ||||| || | || || || |||||| | ||| | ||||| Sbjct 767 TGAGCTTCTTTCAGAGTTCTGGCGGGTACTTAAACCGTCAGGCAGTCTTTATATGTTTTG 708 Lambda K H 0.636 0.409 0.917 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137898297576000