Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_004687.1 Length=156102 Score E Sequences producing significant alignments: (Bits) Value seq54514 91.5 1e-13 seq8276 87.8 2e-12 seq44855 82.4 8e-11 >seq54514 Length=408 Score = 91.5 bits (100), Expect = 1e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 94073 CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTCGAA 94132 |||||||||| ||||| ||| |||||||| ||| ||||| ||| |||||||||||||| Sbjct 292 CGGGGTGTAGCTCAGTCTGGTAGAGCGCTACGTTCGGGACGTAGAGGTCGCAGGTTCGAA 351 Query 94133 TCCTGTCACCCCGAC 94147 ||||||| ||||||| Sbjct 352 TCCTGTCTCCCCGAC 366 >seq8276 Length=3740 Score = 87.8 bits (96), Expect = 2e-12 Identities = 112/153 (73%), Gaps = 1/153 (1%) Strand=Plus/Minus Query 116607 TGCCTGTGCGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGC 116666 |||| || |||||| ||||| ||||| | | ||||| |||||| ||||||| | Sbjct 811 TGCCGGT-CGGCCCCGGCCGGGGCTCGGGTGCCGGCTCCCTGGTCGCCTACGTACTCAAG 753 Query 116667 ATCACCTCGATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTTATCAACCCGGAC 116726 |||||| |||| ||| | || |||||| ||||||||||||| ||||||| || Sbjct 752 ATCACCGACCTCGATCCGCTGGCCTATGACCTGCTGTTCGAGCGCTTCCTCAACCCCGAA 693 Query 116727 CGCCCCGACTTCCCCGACATCGACGTCGACTTC 116759 || | | | |||||| |||||||||||||| Sbjct 692 CGGATCTCCATGCCCGACTTCGACGTCGACTTC 660 >seq44855 Length=668 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 94073 CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTCGAA 94132 |||||||| | ||| |||| || |||||| ||| ||||| |||| | ||||||||| || Sbjct 438 CGGGGTGTGGCGCAGCTTGGTAGCGCGCTTCGTTCGGGACGAAGAGGCCGCAGGTTCAAA 379 Query 94133 TCCTGTCACCCCGAC 94147 ||||||||||||||| Sbjct 378 TCCTGTCACCCCGAC 364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498585004856000