Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_005282.1 Length=86155 Score E Sequences producing significant alignments: (Bits) Value seq66202 113 2e-20 >seq66202 Length=972 Score = 113 bits (124), Expect = 2e-20 Identities = 190/271 (70%), Gaps = 3/271 (1%) Strand=Plus/Plus Query 85028 ATCTTTGGGGGAACTATTAACTCTAAAGGATTTAAGGTACTTGATGAGCATATCGGCCTT 85087 |||||||| || ||||||||||||| | ||||| |||||| || | || | Sbjct 656 ATCTTTGGTGGTGAAGTTAACTCTAAAGGTTACAAGGTTCTTGATACACACGTTGGTGTA 715 Query 85088 ATCTATGGTGACTCTATCACACTGGAACGTGCAAACGAAATCCTGAAGCGTCTGTATGAA 85147 ||||||||||| || ||||| ||| |||| || | |||||| | | || || | | Sbjct 716 ATCTATGGTGATTCAATCACTCTGAAACGCGCCACTGAAATCTTTGAACGCTTGGAAGCT 775 Query 85148 ATGGGTTTTGCAAGTTCTAACGTAGTGTTTGGTGTAGGCTCTTACACTTACCAGTACATG 85207 | ||||||||| ||| | || || ||| | || || |||||| | |||| Sbjct 776 AAAGGTTTTGCATCAAGTAATATTGTATTCGGTATTGGTAGCTATACTTACAACTACAAT 835 Query 85208 ACTCGTGACACCTTTGCATTTGC-TGTCAAAGCAACTCTTGCAAGCATTGGTGGTAAAGA 85266 || ||||||||||||| ||||| ||| ||||||||| | ||| ||||| |||| |||| Sbjct 836 ACACGTGACACCTTTGGTTTTGCATGT-AAAGCAACTGGTTCAATCATTGATGGTGAAGA 894 Query 85267 GATTATGCTTGCAAAAGACCCTAAAACAGAT 85297 ||| || | ||||| || ||||| ||| Sbjct 895 GATCCTGGTGAGTAAAGAGCC-AAAACTGAT 924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 275133584322800