Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_005294.1 Length=42935 Score E Sequences producing significant alignments: (Bits) Value seq90631 87.8 5e-13 >seq90631 Length=574 Score = 87.8 bits (96), Expect = 5e-13 Identities = 163/237 (69%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 2083 CGGAAGAACTCTTTGCGAGAATTTACTTTGTTGACTTCTTGTTTTCTAAAATAGTTGTGT 2142 ||||||||||||||||| | ||| || ||||||| || || | || | ||||| Sbjct 294 CGGAAGAACTCTTTGCGCGGATTCACCTTGTTGATTTGCTGGCGTAGGAA-TGCCTGTGT 352 Query 2143 AGAGTTGTTTCAAGAGCAGGAGCATCTTCGCTGAAAATTAGAGCGTGTACATCAAACGGG 2202 | || |||| || | || || || ||||||||||| | ||||| || ||||| | Sbjct 353 TCAATTTTTTCCAGCCC-GGTGCGTCGTCGCTGAAAATCATGGCGTGGACGTCAAATTCG 411 Query 2203 AATGGAACAGAAGCACTGCTCAATTCAGAGATACGATCCATTGGCTCTAGACGTCTAGTC 2262 || || || ||| | ||| ||| ||| || || | || || || || | ||| Sbjct 412 AAGGGCACGCTGGCATCACCCAACTCACGGATTCGGTCAAGCGGTTCCAGGCGCCGCGTC 471 Query 2263 ATACCAATTTTATAAACATTTTCTCCGAAAGAGCCAATATTAGAAATGATATAGACG 2319 || |||||||| |||| | || || |||||||| || || ||||||| || ||| Sbjct 472 ATCCCAATTTTGAAAACTTCCTCACCAAAAGAGCCGATGTTGGAAATGACGTATACG 528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137057999794200