Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26]
130,300 sequences; 87,617,276 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq2641 111 4e-19
seq108015 84.2 5e-11
>seq2641
Length=263
Score = 111 bits (122), Expect = 4e-19
Identities = 149/206 (72%), Gaps = 1/206 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || | || | ||| || ||||| | ||||||||||||||||| || || ||
Sbjct 249 ATTCCACCACGAAGTCGAAGAACCAGATGCAGAGTAGATTCTTTCTGAATGTTGTAATCG 190
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || |||| ||| ||||| | || || |||||||| || || | |||||||| ||
Sbjct 189 GCAAGGGTTCGACCATCTTCCAACTGCTTACCAGCAAAGATGAGTCGTTGTTGATCGGGG 130
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || || || || || ||||| || | ||| ||||| || | ||||| || |||
Sbjct 129 GGAATACCCTCCTTGTCTTGAAT-TTGGTTTTGACATTGTCGATAGTATCCGAAGATTCA 71
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535
|| || || || |||||||| || ||
Sbjct 70 ACTTCAAGGGTGATAGTCTTGCCGGT 45
>seq108015
Length=311
Score = 84.2 bits (92), Expect = 5e-11
Identities = 124/176 (70%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 268841 TTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTA 268900
|| || ||| ||||||| || || ||||| | ||||||||||| ||||| || ||
Sbjct 258 TTCATCTCTCATATTCTCGCCTTCTTTGCCGCCTCCGATGGTATCGTCAACGAGAACCTG 199
Query 268901 GTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAG 268960
|| || ||| | ||||| || |||||||| || | || ||||| || ||||||
Sbjct 198 GTTGAACGTTTCAGCGCGGAGGTTCAAATTCCTGAGGCTCGCTGCTTTTATGGCTTCCAG 139
Query 268961 ATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATAT 269016
|| || || ||||||||||| || | ||| ||| | || ||||| |||||
Sbjct 138 ATCATGATGGAGAATATTCATTCTGAAACATACTCTCTTCTCATTGATACCTATAT 83
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1149476176352400
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |