Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_006151.1 Length=143461 Score E Sequences producing significant alignments: (Bits) Value seq57 122 8e-23 >seq57 Length=5817 Score = 122 bits (134), Expect = 8e-23 Identities = 236/342 (69%), Gaps = 5/342 (1%) Strand=Plus/Plus Query 94076 TGAGCGTGGGCGCCCCAGAGCATGAACACCAGCTTGGGGCGGGTCTCGCAGAGCCGCTGG 94135 || || ||| ||||||||||| ||||||||| || ||| ||| || | || | Sbjct 1913 TGGGCATGGCTGCCCCAGAGCAGGAACACCAGATTCTCGCGCTCGGCGCTGACCACCTCG 1972 Query 94136 ACGACGGCGCGCAC-GAGCCGCGCCCAGCCGAGCGGGGCGTGGGAGCCGGGGACCCCGCG 94194 | |||| || | || ||| ||||||| | || |||||||||| | | | Sbjct 1973 ATGACG-CGATCGGTGAATCGCTGCCAGCCGGCCTTCGCATGGGAGCCGGCGTTGGCCTG 2031 Query 94195 CCGCACGGTCAGCGTCGTGTTCAGCAGCAGCACCCCGCGGCGCGCCCAGGCCTCCAGGCA 94254 | ||||||||||| ||||| ||||||||||| || | ||||||| || ||| | Sbjct 2032 CTCCACGGTCAGCGAGGTGTTGAGCAGCAGCACGCCCTGCTCCGCCCAGTGCTGCAGATA 2091 Query 94255 GCCGTGGGCGGGCGCGGGCAGCGTCGGGTACGTCGCCCGGACCGCCGCGAAGATGTTGGC 94314 ||||||| ||| |||||| || ||| || ||| | | || ||||||||| Sbjct 2092 GCCGTGGTTGGGAATGGGCAGGTTCAGGT-CG-CGCTTG-AGTTCCTTGAAGATGTTCTG 2148 Query 94315 CAGGCTCGGGGGGATCGGCACCCCGCGCCGGACGCTGAAGGCCAGCCCGTGGGCCTGGCC 94374 ||| ||| || |||||||||| | | || |||| || || ||||||||||| Sbjct 2149 CAGCGACGGCGGCGCCGGCACCCCGGGTTGCACCGAGAAGCTGAGGCCATGGGCCTGGCC 2208 Query 94375 CGGCCCGTGGTACGGGTCCTGGCCGATGATGACCACCTTGAC 94416 ||| |||||||| || ||||| |||| ||||||||| |||| Sbjct 2209 CGGACCGTGGTAGGGATCCTGACCGAGAATGACCACCCTGAC 2250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 458199689748000