Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_006552.1 Length=65195 Score E Sequences producing significant alignments: (Bits) Value seq26518 847 0.0 seq73630 477 4e-130 seq11435 295 3e-75 seq106626 260 6e-65 seq16638 232 3e-56 seq53649 201 5e-47 seq29027 158 5e-34 seq99053 149 3e-31 seq98777 145 3e-30 seq40890 122 4e-23 seq90713 116 2e-21 seq102866 114 5e-21 seq50656 104 1e-17 seq96555 102 3e-17 seq34330 93.3 2e-14 seq3131 82.4 3e-11 >seq26518 Length=1181 Score = 847 bits (938), Expect = 0.0 Identities = 754/933 (81%), Gaps = 22/933 (2%) Strand=Plus/Plus Query 9112 GCCGAGGAGGTGTGCCTCGAAGCTGATCGACAGGCCTTCGGCGCGGCCGGTGAAGCGGCG 9171 ||| || ||||| ||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct 161 GCCCAGCAGGTGCGCCTCGAAGCTGATCGATAAGCCTTCGGCGCGGCCGGTGAAGCGGCG 220 Query 9172 GAACTGGTTGAAGGTGCGCTTGTCCGCCGGGATCTCCGGCGACAGGCCGTAGTCCTTGTG 9231 ||| ||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct 221 GAATTGGTTGAGGGTGCGCTTGTCCGCCGGGATCTCCGGCGCCAGGCCGTAATCCTTGTT 280 Query 9232 CTGGATGAAGTCGTAGAACGCCCGTGGCTGCTGTTCGTCGATCAGTTCGGAAAGGGCGTC 9291 ||||| |||||||||| || |||||| || ||||| |||| ||||| ||||| || Sbjct 281 GCGGATGTAGTCGTAGAAGGCGCGTGGCGCCTCGTCGTCCATCAACTCGGAGAGGGCATC 340 Query 9292 GAGGGTCATCGGCTCACCGAGGCGTGCCTGCGCGGTGGCGTAGTCGACCAGCGACACGGT 9351 |||| ||| ||||||||| | ||||| | |||||||||| ||||| | |||| Sbjct 341 CAGGGCCATGGGCTCACCGCGCTTGGCCTGGCTGCTGGCGTAGTCCACCAGGGTGTCGGT 400 Query 9352 TTTTTC---GCGGGCCTGTTCCTCGGCCATGCCCTCGCTTTCCACGAAGTCGCTGAAGGC 9408 ||||| | ||||| |||| | || | ||||||| ||||| ||||||||||||| Sbjct 401 CTTTTCCTTGGCGGCCTCTTCC---GGCAGGTCCTCGCTCTCCACATAGTCGCTGAAGGC 457 Query 9409 TTTCAGCAGGGGTGCGCGTCTCGCCC--GGCGATCGACCCCTTCCTGGCAGCCGATGAAG 9466 || ||||||| | || ||||||||| |||| ||||| | ||||||||| ||||||||| Sbjct 458 CTTGAGCAGGG-TACGGGTCTCGCCCTTGGCG-TCGACGC-TTCCTGGCAACCGATGAAG 514 Query 9467 TCGCGGAAGTAGTCGGAGAGCTTTCTCCCGCCCTTGCCCTTGATGAACGAGATGTACTGC 9526 |||||||||||||| |||| ||| | ||||||||||| ||| || ||||||||||| Sbjct 515 TCGCGGAAGTAGTCCGAGACCTTCTTGCCGCCCTTGCCACGGATAAAGGAGATGTACTGG 574 Query 9527 TTCGACTGCTTGTTGTTGCGCCACTCGGAGAGGTTGATTCGCGCCGCCAGGTGTAACTGG 9586 ||||||||||||||||||||||||||| |||||||| |||||||||||||| | |||| Sbjct 575 CGCGACTGCTTGTTGTTGCGCCACTCGGACAGGTTGATGCGCGCCGCCAGGTGCAGCTGG 634 Query 9587 CCGAGGTCGAGGTGGCTCGACGGGGTGACGTCCAGTGACTCGTTCACCGCCGCCCCTTCG 9646 || ||||| ||||| | | ||| | || ||||| ||| | || | | |||| ||| Sbjct 635 CCCAGGTCCAGGTGCTTGGCCGGCGCCACTTCCAGCTTTTCGGTGACGGTCACCCCCTCG 694 Query 9647 CTGTGGTGCAGCAGGGCGATCGCCAGGTAGTCGGTCATGCCCTGCTGGTAGTGGGCGAAC 9706 |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct 695 CTGTGGTGCAGCAGGGCGATGCTCAGGTAGTCGGTCATGCCCTGCTGGTACTGGGCGAAC 754 Query 9707 AGTACGTAGCCGCCGGTGGAGAGGTTG-GACTCTTCCATCAGCTTCTGCAGGTGTTCCAC 9765 || || | ||||||||||||||||||| ||| |||||||| || ||||| ||||| Sbjct 755 AGCACATGGCCGCCGGTGGAGAGGTTGCTGCTC-TCCATCAGGCCCTTGAGGTGCTCCAC 813 Query 9766 CGCCTCGCGGCTGAACCCCACGAAGTCGCGGTCGCCTTCCAGGTACTCGCCGAGCCAGCC 9825 ||||| ||| ||||| | ||||| || | ||||||||||| || | |||||||| Sbjct 814 CGCCTGGCGACTGAAGGCGACGAAATCCTGTTCGCCTTCCAGATAGGCATGCAGCCAGCC 873 Query 9826 GCTGAACGGGTAGGCCCCGGACTCGCCCTGGAAGAAGCCCCAGGCCTTGTT---CTTGGC 9882 ||||| || ||||| ||||| || | ||||| | ||||||||||||||| |||||| Sbjct 874 ACTGAAGGGATAGGCGCCGGATTCCTCGTGGAACAGGCCCCAGGCCTTGTTGGGCTTGGC 933 Query 9883 GTTGTAGCTTTCGTTGAGGTCGGCCAGCAGGTTCTCGATGACCTGGGAGTTACCCAGCTC 9942 ||||||||| |||||||| ||||||||||| ||||||||| ||||||||| |||| || Sbjct 934 GTTGTAGCTGTCGTTGAGATCGGCCAGCAGATTCTCGATGGCCTGGGAGTCGGCCAGTTC 993 Query 9943 AGCGTCGCGCGCATGGAGCACGGTCGGGG---TGCCGTCGGGCTTCTTGTCGATCAGGTG 9999 ||||| ||||| | ||| ||||| || |||||||||||||||||||||||| || Sbjct 994 GGCGTCCCGCGC---GTGCAGGGTCGCGGGCTGGCCGTCGGGCTTCTTGTCGATCAGATG 1050 Query 10000 GATGATGGAATGGCGGATAGGCATGGCTGCCTC 10032 || ||||| || ||||| |||||||| | ||| Sbjct 1051 GACGATGGCGTGACGGATCGGCATGGCGGACTC 1083 >seq73630 Length=501 Score = 477 bits (528), Expect = 4e-130 Identities = 407/498 (82%), Gaps = 3/498 (1%) Strand=Plus/Plus Query 9104 ACCTTGGTGCCGAGGAGGTGTGCCTCGAAGCTGATCGACAGGCCTTCGGCGCGGCCGGTG 9163 ||||||| ||| || ||||| || |||||||||||||||||||| ||||||||||||||| Sbjct 1 ACCTTGGAGCCCAGCAGGTGCGCTTCGAAGCTGATCGACAGGCCCTCGGCGCGGCCGGTG 60 Query 9164 AAGCGGCGGAACTGGTTGAAGGTGCGCTTGTCCGCCGGGATCTCCGGCGACAGGCCGTAG 9223 ||||| |||||||||| | ||| || ||||||||||| | ||||| | || ||||||| Sbjct 61 AAGCGCTGGAACTGGTTCAGGGTACGTTTGTCCGCCGGAAATTCCGGGGCCATGCCGTAG 120 Query 9224 TCCTTGTGCTGGATGAAGTCGTAGAACGCCCGTGGCTGCTGTTCGTCGATCAGTTCGGAA 9283 ||||||| ||||| ||||||||||| || || | | |||||||||||| |||| Sbjct 121 TCCTTGTTGCGGATGTGCTCGTAGAACGCGCGCGGACGGTCTTCGTCGATCAGGCCGGAC 180 Query 9284 AGGGCGTCGAGGGTCATCGGCTCACCGAGGCGTGCCTGCGCGGTGGCGTAGTCGACCAGC 9343 || |||||||||| || ||||| || || ||||| |||||||||| ||||||| Sbjct 181 AGCTCGTCGAGGGTGATTGGCTCGCCCAGCTTGGCCTGGCTGGTGGCGTAGCCGACCAGG 240 Query 9344 GACACGGTTTTTTCGCGGGCCTGTTCCTCGGCCATGCCCTCGCTTTCCACGAAGTCGCTG 9403 | | |||||| ||||| ||||| || |||| | | |||||||||||||||| |||||| Sbjct 241 GTC-TGGTTTTCTCGCGCGCCTGCTCTTCGGGTAGGTCCTCGCTTTCCACGAAATCGCTG 299 Query 9404 AAGGCTTTCAGCAGGGGTGCGCGTCTCGCCC-GGCGATCGACCCCTTCCTGGCAGCCGAT 9462 ||||| || |||| ||||||||||||||||| ||| ||||| ||||||||||||||||| Sbjct 300 AAGGCCTTTAGCA-GGGTGCGCGTCTCGCCCGGGCCGTCGACGCCTTCCTGGCAGCCGAT 358 Query 9463 GAAGTCGCGGAAGTAGTCGGAGAGCTTTCTCCCGCCCTTGCCCTTGATGAACGAGATGTA 9522 ||| ||||||||||| || |||| ||| | ||| ||||||||||||||| |||||||| Sbjct 359 GAAATCGCGGAAGTAATCCGAGACCTTCTTGCCGTTCTTGCCCTTGATGAAGGAGATGTA 418 Query 9523 CTGCTTCGACTGCTTGTTGTTGCGCCACTCGGAGAGGTTGATTCGCGCCGCCAGGTGTAA 9582 |||||| |||||||||||||| |||||||| || |||||| ||||| |||||||| | Sbjct 419 CTGCTTGGACTGCTTGTTGTTCTGCCACTCGCTGATGTTGATGCGCGCGGCCAGGTGCAG 478 Query 9583 CTGGCCGAGGTCGAGGTG 9600 || || ||||| ||||| Sbjct 479 TTGACCCAGGTCCAGGTG 496 >seq11435 Length=1934 Score = 295 bits (326), Expect = 3e-75 Identities = 634/929 (68%), Gaps = 39/929 (4%) Strand=Plus/Minus Query 10068 TTCTTCGCCGCCCAGTGCTACCAGCAGCTCGGGGATGAATTGCTGGAAGGTGAGCATCAT 10127 |||||| || ||||| ||| | | ||||| || | ||||| | | ||| | |||||| Sbjct 1218 TTCTTCACCACCCAGGGCTTCGATCAGCTGTGGCAGGAATTCCGCCAGGGTCATCATCAT 1159 Query 10128 CAGGACGAAGCTGGCGTCGGCCTGTGCGAACTCGTCGGAATCCTTACCAGCGTCGTCCAG 10187 ||| |||||||||||||| ||| ||| |||| || | || ||||| | Sbjct 1158 CAGCACGAAGCTGGCGTCCTGCTGGCCGAGGGCGTC-------TTCGCCGC--CGTCCTG 1108 Query 10188 T---GCCCGCTCCTGCAGCAGGTCGTCGAAGCGGAGGCTGCGGATCACCAGACCCT--CG 10242 | ||| | |||||||| ||||| ||||| |||| ||| |||| | || Sbjct 1107 TTCGGCCTGGTCCTGCAGGAGGTCCTCGAACTTCAGGCGCTTGATGGT--GACCTTGTCG 1050 Query 10243 TCGAGTACGAAGTAGAGGTCTTTCTTCCAGGCGAGAGCGAGCTTGGTGACGCTCTTACCT 10302 || || | | | || | | || |||||| || || ||||||||||| ||| || Sbjct 1049 TCCAGCAGCAGGGCCAGCTTGTCCTGCCAGGCCAGGGCCAGCTTGGTGACCAGCTTGCCG 990 Query 10303 GAGTCGAGGTGCTGGCGGATCACGTCGCTGGTCAGGTCCTGGTGTTTG--GCGGTG-ATG 10359 | | | ||||| | ||||| | |||||||| |||||||| ||| ||| | | Sbjct 989 GCGCCCAGGTGGTTCTGGATCTCTTCGCTGGTGAGGTCCTGACCCTTGCAGCGCACCACG 930 Query 10360 CTGCCTTGCTCGTCGGTGTCGCGGAGCAGGGCGCCGTCGCACAGCCAGAAGTCGCCACCC 10419 | ||| | ||| ||| ||||| ||| ||| ||| || | || |||| Sbjct 929 CCGCCGTCTTCGCCGGCATCGCG---CAGTTCGCACTCGTCGAGGATGTAGAGGCCATGG 873 Query 10420 GCATTAGTTTCTT-GGCTTCGCAGCCACTCGGTCATGGTTGCCGTCGGCGAAACCTTGGT 10478 | | | || ||| | | | ||| ||||| | ||| ||| | || | |||| Sbjct 872 G---TGGCGTCACCGGCCTTG-ACCCAGTCGGTGAAGGTGGCCATGGGGGCCTGCTTGAC 817 Query 10479 TGCGATCGGTCGGACGGGGAGAGAGCCCAGGGCTTCGCGCAAGGTCGACAGCAGATCCTC 10538 | | ||| ||||| || || ||||||||||| ||||||| ||| || ||||| || || Sbjct 816 GCCCAGCGGGCGGACCGGCAGCGAGCCCAGGGCATCGCGCAGGGTGGAGAGCAGGTCTTC 757 Query 10539 GGCGGCCTTCGCCGTGGCGGTGTCCACGATCACCAGGCCTTGCGCCGGCATGATTGCGGC 10598 |||| ||| || ||| || ||| || | | | ||| ||| || ||| ||||| Sbjct 756 GGCGCGCTTGGCGCTGGAGGCGTCGACCAGGATCCAGCCCTGCTTGGGATCGATGGCGGC 697 Query 10599 GAAGGTGCGCTTGCGGCGGGTGAACGCGCGCGGTAGGAGGGTCTGGACGATCTCGTCCTT 10658 ||||| || ||| ||| |||| |||||||| |||| || |||||||||||||||||| Sbjct 696 ATAGGTGGTCTGGCGCCGGATGAAGGCGCGCGGCAGGAAGGCCTGGACGATCTCGTCCTT 637 Query 10659 CAACTGGTCGCGCTCTTTCTTGTAGACCTTGCGCTGCTG--GGTTTCCTCGATCTCTTCG 10716 | ||| || ||| |||||||||||||||||| ||| ||||| |||||||| ||| Sbjct 636 GATCTGCTCCTTCTCCTTCTTGTAGACCTTGCGCATCTGCTGGTTT--TCGATCTCGTCG 579 Query 10717 ACCTTCTCCTTCAGTGCTTCGTTGACCACGCTGCCAGGCAGGATCTTCTCCTCCTTGCG- 10775 ||||| |||| || ||||| ||||||||||||| |||||||| || |||||||| Sbjct 578 ACCTTTTCCTGCACGGCTTCCTTGACCACGCTGCTGGGCAGGATGCGTTCTTCCTTGCGC 519 Query 10776 GCAGCAGATCAGCCAGAATCCGTTCGCCTCGCGTACCAGCGGTGCGTC---ACCCTTGCC 10832 || || |||||| | || || | ||| | |||||||| ||| |||||||| Sbjct 518 GCGGC-GATCAGGAAAAAGCCCTGGCTTTCGTGCACCAGCGGCAGGTCCGGGCCCTTGCC 460 Query 10833 GACCGGCGGCG-CGAAGCCGTAGGTGGTCAACTCCTGGGAGGCGCAGGG-CGCGCTGGTT 10890 || || |||| |||| || ||||||| ||| |||||| ||||||||| || || || | Sbjct 459 GA-AGGGGGCGACGAATCCATAGGTGGACAATTCCTGGCTGGCGCAGGGACGAGCCGGCT 401 Query 10891 TGCTCGCCAGGGCACTTTCCAGAGCGCTGGCCGTTGTGTCGATGGGTTGGGTGAGGCGGT 10950 || || ||||| ||| || || || | | ||| |||||||| |||| Sbjct 400 TGGCGGCGAGGGCGGCTTCGAGGGCTTCGGTCTCGAAGGCGACTTCCTGGGTGAGACGGT 341 Query 10951 AGATCAGTAGGTTGCGGAACCACATGGTG 10979 ||| || || || ||||||||||||||| Sbjct 340 AGACGAGCAGATTACGGAACCACATGGTG 312 >seq106626 Length=354 Score = 260 bits (288), Expect = 6e-65 Identities = 254/326 (78%), Gaps = 2/326 (1%) Strand=Plus/Minus Query 7458 GTGATGGGTACAGTCGGGGCTCATATGGAACCAGCCGACCGGGCGTCCCTGGCACTCGTC 7517 ||| ||||| |||||||||||||| |||||||||||||||||||| ||| ||||||| | Sbjct 354 GTGGTGGGTGCAGTCGGGGCTCATGTGGAACCAGCCGACCGGGCGGCCCGCGCACTCGGC 295 Query 7518 GTCAGGGTCACCGTCGAAGACGTCCGTCATGAAGTGCCGAGCATGGGGGTGATTGGCGGT 7577 || || ||||||||||| ||||| || |||||||||| || |||||| |||||||| Sbjct 294 ATCCGGATCACCGTCGAAAACGTCGGTGGTGAAGTGCCGGGCGGTGGGGTGGTTGGCGGT 235 Query 7578 GTGCATGGCAATTGCGGCAGAACTGTGGTTTTTTGCCGCGTTCACCGGGCGGCCCAGGCC 7637 ||||||| || || || | |||||||| || ||| || |||||| ||||||||||| Sbjct 234 GTGCATGCTGATCGCCGCCGCGCTGTGGTTCTTGGCCACGGCCACCGGCCGGCCCAGGCC 175 Query 7638 CATTTCCAAGCCCGTACCGGCGCCACCTCCGCCGCAAAAGTAGTCTGCGACGATCGCGTC 7697 ||| |||| || |||||||| || || || ||||||||| | || ||| |||| |||| Sbjct 174 CATCTCCAGCCCGGTACCGGCACCGCCACCACCGCAAAAGAAATCCACGATGATCTCGTC 115 Query 7698 GTCGGTGTCGTCCAGGGCCAGGCCGTACTGGGTTTTGAAGTCGAGCGGGGAGGGCTTCTT 7757 ||| | | | | ||||||||||||| |||||||||||||||| || || || Sbjct 114 GTCCTGGCTGCTAAAGCCCAGGCCGTACTGCGTTTTGAAGTCGAGCGAGGCCCGCCGCTG 55 Query 7758 GAGGGAAGTCATG--CGGGCTCCTTG 7781 || || |||||| ||| |||||| Sbjct 54 GAATGAGGTCATGTTCGGTTTCCTTG 29 >seq16638 Length=4153 Score = 232 bits (256), Expect = 3e-56 Identities = 187/226 (83%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 11164 GCCGCCGAGCAGTTGCATGTTGCCGTTGATGTCGACCACTACCTCGGTGCTGTAGTGGTC 11223 ||| || |||| |||||||||||||||||||||||||| | |||||| ||||| | || Sbjct 3928 GCCACCCAGCAACTGCATGTTGCCGTTGATGTCGACCACGATTTCGGTGGTGTAGCGATC 3987 Query 11224 CTGGCCGTCCTGGCCCTGCCACTTGCGGGTGCGTAGGCTGCCTTCGATGTAGACCTGGGA 11283 ||| ||||||||||||||||| |||||||| || || |||| |||| ||||||||||| Sbjct 3988 CTGACCGTCCTGGCCCTGCCATTTGCGGGTACGCAGAGTGCCCTCGACATAGACCTGGGA 4047 Query 11284 GCCCTTTCGCAGGTATTGCGCTGCGATTTCGGCCAGCCGGCCAAAGAGCACGACCCGGTG 11343 |||||| || | ||| | | ||||| ||||| || || || |||| ||| || ||||| Sbjct 4048 GCCCTTGCGGATGTACTCGCCGGCGATCTCGGCGAGACGACCGAAGAACACCACGCGGTG 4107 Query 11344 CCACTCGGTGCGCTCCTGCTGCTGGCCGGTCTGCTTGTCTTTCCAG 11389 ||| |||||||| ||||||||||| |||||||||||||| |||||| Sbjct 4108 CCATTCGGTGCGGTCCTGCTGCTGACCGGTCTGCTTGTCCTTCCAG 4153 >seq53649 Length=1214 Score = 201 bits (222), Expect = 5e-47 Identities = 298/417 (71%), Gaps = 23/417 (6%) Strand=Plus/Plus Query 5747 CGTTGGCTCGCGCGATCGCTGCCATCGGCGGCGGGCTGACGCTGTTACCGCACATATGCA 5806 ||||||| || || ||||| ||||| |||||||| |||||||||||||||||| || | Sbjct 781 CGTTGGCCCGGGCAATCGCCGCCATGTGCGGCGGGA-GACGCTGTTACCGCACATGTGGA 839 Query 5807 CCTGTTCGGTTTTGCTGAACGGCTTGCCGTCAGCGCCGCGGTCGATGATGTAGTCGGTCG 5866 |||| |||| |||| |||||||||||||||| |||| ||||| |||| | | Sbjct 840 CCTGCTCGGATTTGGTGAACGGCTTGCCGTCGTGGCCGAATTCGATTTGGTAGGAGTCAG 899 Query 5867 GAAATCCCTGGGCTCGGTACAGTTCGGGCGGTTGCAGCATCCGCAAGCAGATGTCGACTA 5926 | || |||||||| |||||||| || |||| |||||||| |||| || ||||||||| | Sbjct 900 GGAAGCCCTGGGCGCGGTACAGCTCTCGCGGCTGCAGCATGCGCAGGCCGATGTCGACCA 959 Query 5927 TCACGTAGGGGGTGCCTTTTACGAACACGGTCACGAGAGCCAGGCGGTCCTTGGTGGTAA 5986 | |||||| ||||||| | ||||| ||||| |||||||| ||||| ||||| | Sbjct 960 CGATGTAGGGCGTGCCTTGGATCGTGACGGTGACGAGCGCCAGGCGATCCTTTGTGGTGA 1019 Query 5987 CGGCCGTCACGGGGTGATCCAGTTCTGCC------CATTGACCGCCGGTGCTGTGATAGC 6040 ||| | ||| | || || | ||| ||| |||| | || |||| Sbjct 1020 CGGTGG----GGGAGGCTC--GTCCGGCCGGCTGGTGTTGTCCGC----ACCGTAGTAGC 1069 Query 6041 GCATCAGGAACGCAGCGACGCGCAGAGCGCCAGCCTCGTGTTCGGGTGACAGCTTGTACT 6100 ||||||||| || ||||||||||| |||| || ||| || || || |||| || Sbjct 1070 TCATCAGGAAAGCGGCGACGCGCAGGACGCCGGCTTCGACCTCCGGCGAGAGCTGCAGCT 1129 Query 6101 CGA----TGAGGGCGTGATGCTCGGCGCCGGCGGTAAGAGTCGGAATCGGCTCGTCG 6153 ||| ||| || || || || |||||||||| | ||||| ||||||||| Sbjct 1130 CGACCACTGA-GGTTTGCCGC-CGCCGCCGGCGGTGATGGTCGGCGCAGGCTCGTCG 1184 >seq29027 Length=2418 Score = 158 bits (174), Expect = 5e-34 Identities = 236/335 (70%), Gaps = 0/335 (0%) Strand=Plus/Plus Query 11165 CCGCCGAGCAGTTGCATGTTGCCGTTGATGTCGACCACTACCTCGGTGCTGTAGTGGTCC 11224 || || |||| |||||| ||||| | || ||| || ||||| ||| |||| | ||| Sbjct 828 CCACCCAGCATCTGCATGGTGCCGCCCACGTTGACAACCACCTCCGTGGTGTAACGTTCC 887 Query 11225 TGGCCGTCCTGGCCCTGCCACTTGCGGGTGCGTAGGCTGCCTTCGATGTAGACCTGGGAG 11284 || ||| |||| ||||||| || |||||||| || |||||| || || ||||| || Sbjct 888 TGACCGCCCTGATCCTGCCATTTACGGGTGCGCAGCTGGCCTTCAATATACACCTGAGAA 947 Query 11285 CCCTTTCGCAGGTATTGCGCTGCGATTTCGGCCAGCCGGCCAAAGAGCACGACCCGGTGC 11344 || || |||||||||| | | || | ||| ||||| |||||| |||||||| |||||| Sbjct 948 CCTTTACGCAGGTATTCCCCCGCCACTTCCGCCAGTTTGCCAAACAGCACGACACGGTGC 1007 Query 11345 CACTCGGTGCGCTCCTGCTGCTGGCCGGTCTGCTTGTCTTTCCAGCTTTCGCTAGTGGCC 11404 || |||||| ||| | | | |||||||||||||| |||||| || || ||| Sbjct 1008 CATTCGGTGATCTCTTTGTTTTCACCGGTCTGCTTGTCGCGCCAGCTCTCAGAGGTAGCC 1067 Query 11405 AGACTGAGGGAGGTGACCGCCTTTCCGCCCGGGGTAGATCTTGCGTCTGGATCCTGGCCC 11464 || | | | || ||| || || || | | | | | || |||||||| ||| Sbjct 1068 AGCGTAATGTTGGCGACAGCGCCACCATTTGGCATGTAACGTACTTCCGGATCCTGACCC 1127 Query 11465 AGATGGCCGACCAGGATTACCTTGTTCACTCCGCG 11499 |||| ||||| || || || ||||| || || || Sbjct 1128 AGATTCCCGACAAGAATCACTTTGTTAACGCCACG 1162 >seq99053 Length=261 Score = 149 bits (164), Expect = 3e-31 Identities = 114/135 (84%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 11164 GCCGCCGAGCAGTTGCATGTTGCCGTTGATGTCGACCACTACCTCGGTGCTGTAGTGGTC 11223 ||||||||||| ||||| ||||||||||||||||| |||||||||||| | ||| | || Sbjct 116 GCCGCCGAGCAACTGCATATTGCCGTTGATGTCGACGACTACCTCGGTGGTATAGCGATC 175 Query 11224 CTGGCCGTCCTGGCCCTGCCACTTGCGGGTGCGTAGGCTGCCTTCGATGTAGACCTGGGA 11283 |||||||||||| || ||||| ||||| ||||| || ||||||||| ||||||||||| Sbjct 176 CTGGCCGTCCTGCCCTTGCCATTTGCGCGTGCGAAGCGTGCCTTCGACATAGACCTGGGA 235 Query 11284 GCCCTTTCGCAGGTA 11298 ||| || || | ||| Sbjct 236 GCCTTTACGGATGTA 250 >seq98777 Length=649 Score = 145 bits (160), Expect = 3e-30 Identities = 183/248 (74%), Gaps = 4/248 (2%) Strand=Plus/Plus Query 5736 CCTCCATGGATCGTTGGCTCGCG-CGATCGCTGCCATCGGCGGCGGGCTGACGCTGTTAC 5794 || ||| || || ||||| || | | | ||| |||| ||| || | ||| || | Sbjct 371 CCGCCAAGGGTCATTGGCCCGTGGCCAGCGCAGCCAGGACCGGGGGACAGACCGAATTGC 430 Query 5795 CGCACATATGCACCTGTTCGGTTTTGCTGAACGGCTTGCCGTCAGCGCCGCGGTCGATGA 5854 |||||||| ||||||||||||||||| | | ||||||||| || || |||||||||| Sbjct 431 CGCACATACGCACCTGTTCGGTTTTGGTCAGCGGCTTGCCATCGTGCCCCCGGTCGATGA 490 Query 5855 TGTAG-TCGGTCGGAAATCCCTGGGCTCGGTACAGTTCGGGCGGTTGCAGCATCCGCAAG 5913 ||||| |||| |||| ||||||| |||||| || | || ||||||||||||| Sbjct 491 TGTAGCTCGGCGGGAA--GCCTGGGCGGCGTACAGCTCATGGGGCTGCAGCATCCGCAGA 548 Query 5914 CAGATGTCGACTATCACGTAGGGGGTGCCTTTTACGAACACGGTCACGAGAGCCAGGCGG 5973 | || || || ||||| ||||| | |||||| | | || || || || ||||||||| Sbjct 549 CGGACATCAACGATCACATAGGGCGAGCCTTTGAGTACGACCGTGACCAGTGCCAGGCGG 608 Query 5974 TCCTTGGT 5981 |||||||| Sbjct 609 TCCTTGGT 616 >seq40890 Length=365 Score = 122 bits (134), Expect = 4e-23 Identities = 178/246 (72%), Gaps = 7/246 (3%) Strand=Plus/Plus Query 11263 GCCTTCGATGTAGACCTGGGAGCCCTTTCGCAGGTATTGCGCTGCGATTTCGGCCAGCCG 11322 |||||||| ||||||| | ||| || |||||||| | | ||||| ||| | ||| Sbjct 12 GCCTTCGACGTAGACCGAGCTGCCTTTGCGCAGGTACTCGCCGGCGATCTCGCCAAGCTT 71 Query 11323 GCCAAAGAGCACGACCCGGTGCCACTCGGTGCGCTCCTGCTGCTGGCCGGTCTGCTTGTC 11382 || |||| |||||| ||||||||||||||||| |||||||| | ||| ||| || | Sbjct 72 TCCGAAGAACACGACGCGGTGCCACTCGGTGCGTTCCTGCTGGTTGCC-GTC-GCGATCC 129 Query 11383 TTTC-CA-GCTTTCGCTAGTGGCCAGACTGAGGGAGGTGACCGCCTTTCCGCCCGGGGTA 11440 || | || ||| | | |||||||| |||| ||||| ||| | ||| || |||| Sbjct 130 TTGCGCACGCT---GGTGGTGGCCAGGCTGATCCGGGTGATGGCCATGCCGGCCTGGGTG 186 Query 11441 GATCTTGCGTCTGGATCCTGGCCCAGATGGCCGACCAGGATTACCTTGTTCACTCCGCGT 11500 | | | ||| ||||| | ||| || | |||||| ||||| || ||||| | ||||| Sbjct 187 TACTTGGTGTCGGGATCGTTGCCGAGGTTGCCGACGAGGATGACTTTGTTGATGCCGCGG 246 Query 11501 GCCATG 11506 |||||| Sbjct 247 GCCATG 252 >seq90713 Length=217 Score = 116 bits (128), Expect = 2e-21 Identities = 130/170 (76%), Gaps = 3/170 (2%) Strand=Plus/Minus Query 17175 GCTTTCACCTTGCAGGCGCGGGCCTGCAGCTCTTTGCCGTTCACTTCGACGACCAGGTAC 17234 |||||||||||| || |||||| ||||||||||||||| || |||| |||||||| Sbjct 217 GCTTTCACCTTGGTGGGGCGGGCGCGCAGCTCTTTGCCGTCAACCGCGACCACCAGGTAA 158 Query 17235 TCACCGCCACCGCGGCCGGTGCCCTTGTTGATGGT-GCGCAGGAACTTGCCTTCCTTCGC 17293 |||||| |||||||| | |||| ||| || | || | ||| |||| | |||| | Sbjct 157 CGACCGCCGCCGCGGCCTGGGCCCAGGTTC-TGCTCGCCGACGAAGCTGCCGTGCTTCTC 99 Query 17294 GACGCCACGCGGGTTGGTCAGGATCACGGACTGGCCTTTCTTGAACATCG 17343 ||| || |||||||| ||||| || | ||||||||||||||| |||| Sbjct 98 CTGGCCGCGAGGGTTGGTGAGGATGACCGGCTGGCCTTTCTTGAA-ATCG 50 >seq102866 Length=744 Score = 114 bits (126), Expect = 5e-21 Identities = 216/311 (69%), Gaps = 15/311 (5%) Strand=Plus/Plus Query 19764 CGCGCTGCCAGATACCGGCCGACATGCCAGGCCCGAAAGACCCGAACTGCAAGGCGTACC 19823 |||| ||||| | || | |||||||| || || || |||| || |||||| ||| | Sbjct 139 CGCGTTGCCA--TCCCTGAAGACATGCCCGGTCCCAAGGACCAGAGCTGCAAAACGTTCA 196 Query 19824 GCACATGGGCCAACTACGCCATGGCCTATCGCACTCGATACACCGCTTGGCCGGTTTGGA 19883 | ||||||||||||||||||||||| |||| || |||| ||| |||||||| |||| Sbjct 197 AGGCCTGGGCCAACTACGCCATGGCCTACCGCAAGCGCTACAGCGCCTGGCCGGTGTGGA 256 Query 19884 ACGCATCGGTTGCCGGCAAGCTTTCGAAGCTGATCGATCGTGTGGGCCAGGCCGAC-GCG 19942 |||| |||||| || || | ||||| | || || ||||| |||||| || Sbjct 257 ACGCCAAGGTTGCTGGTCAGGTAGGCCAGCTGGTTGACCGCCTGGGC---GCCGACATCG 313 Query 19943 CCAA--AGGTGGCCGCGTTCTACGTCAAGTGCATCCACGATGCTCGACTGATTGCTCAGC 20000 || | | || ||||| | || |||| ||||| |||| | || ||||| | | Sbjct 314 CCCACCACGTCGCCGCCTACTTCGTC---GGCATCAACGACTCCCGCCTGAT--CAACGG 368 Query 20001 A--CCATCCCCTCGGCCTGTTGCTGGCGAACGCTGAGGGCTACCACACGATGTGGTTGAC 20058 | |||| ||| ||| ||||||| ||||||| ||||||||| |||| || Sbjct 369 ATGCCATGGCCTGGGCGACCTGCTGGCACGAGCTGAGGCCTACCACACCCAGTGGGCCAC 428 Query 20059 CAATCGCCCGA 20069 ||| |||| || Sbjct 429 CAACCGCCAGA 439 >seq50656 Length=702 Score = 104 bits (114), Expect = 1e-17 Identities = 167/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 6205 AGGCGCTGCTGGCTGCCCGAGTTGGTTACCGTGCTCATCGGATCGTCCATGCTCCGGCCG 6264 |||||||| |||||||||| ||||| | ||| |||| || || | ||| | | Sbjct 528 AGGCGCTGTTGGCTGCCCGTATTGGTGATGGTGGTCATTGGCCGTTCGACGCTGTGTGCA 469 Query 6265 AAGGTGGTGTTGAAACCGGAGTTGGCCTGTTCGATGAAGGCTGTGCAGACCCCCAAGGCA 6324 ||||||||||||||| ||| |||||||| | ||| || ||||| || |||| ||| Sbjct 468 GGCGTGGTGTTGAAACCGCCGTTCGCCTGTTCCAAGAACGCCGTGCAAACACCCATCGCA 409 Query 6325 TGTGCGGCGCCTGCTGGACGTTTGAAGTTGCCTCCGCTGGTGATCGTAGGCATTGGCTCG 6384 || || ||||| || || || | ||| ||| || ||||| || || | ||| ||||| Sbjct 408 TGCGCTGCGCCGGCGGGGCGCTGATAGTCGCCACCACTGGTTATGGTGGACATCGGCTCA 349 Query 6385 GTGATGTCCGCCCCGTCACTGTTGAACCGGAACTTGACCAGGTGTGCCGATGCAACGGCG 6444 | | || ||| | || ||| ||||| || |||||||| || | || || ||| Sbjct 348 TCGGCCGCGGCGCCGGCGGAGTCGAAGCGGAATTTCACCAGGTGCGCTGCCGCGACCGCG 289 >seq96555 Length=329 Score = 102 bits (112), Expect = 3e-17 Identities = 166/233 (71%), Gaps = 21/233 (9%) Strand=Plus/Plus Query 2436 TTGTCCAGCGCCTGCTGGATCTTGGTGAAGGCCTCGGGGTGCTGCTGGTCGAACGCTGGC 2495 || |||||| || | |||||||| | |||||||||||||||| ||||||| | ||| Sbjct 101 TTCTCCAGCATCTCCACGATCTTGGCGTAGGCCTCGGGGTGCTGAAGGTCGAAGGTTGGG 160 Query 2496 A--TGCGGGCAGACTCAACCCACGTGCCGCG---CTCGGCGCCCTTGTCGAGCCAGGATC 2550 | ||||||| | | |||| |||||| |||| ||| | | ||||||| | Sbjct 161 AGGTGCGGGCCGGGC--AGCCACTGGCCGCGGATCTCGCCGCGCA---CCAGCCAGGGCC 215 Query 2551 G--------TG-TCCAGTTCGTCGCGCTGACGCCGCATTCGGCGATCTGCTTCGTGG-TG 2600 | || ||||| | |||||| |||| |||||||||||||| ||| || Sbjct 216 GGCCGCCGCTGATCCAGACGCTGCCGCTGATGCCGTGCTCGGCGATCTGCTTTATGGGTG 275 Query 2601 ATGAAGCCCTGGCGGCGAAGCGTGGCGATCACCTTCAGCGCGCCTTCTTTCCA 2653 ||||||||||| || || |||||||| ||||||||| | || | ||| ||||| Sbjct 276 ATGAAGCCCTGTCGCCGTAGCGTGGCTATCACCTTC-GGGCCCGTTCCTTCCA 327 >seq34330 Length=397 Score = 93.3 bits (102), Expect = 2e-14 Identities = 68/78 (87%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 9112 GCCGAGGAGGTGTGCCTCGAAGCTGATCGACAGGCCTTCGGCGCGGCCGGTGAAGCGGCG 9171 ||| || ||||| |||||||||||||||||||| || ||||| || || ||||||||||| Sbjct 79 GCCCAGCAGGTGCGCCTCGAAGCTGATCGACAGTCCCTCGGCACGCCCAGTGAAGCGGCG 20 Query 9172 GAACTGGTTGAAGGTGCG 9189 ||| |||||| ||||||| Sbjct 19 GAATTGGTTG-AGGTGCG 3 >seq3131 Length=1941 Score = 82.4 bits (90), Expect = 3e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 8413 GGTCCCGCGCGACGCGGAACAGGTTCACCACGTCCCCGTCGAGGTCGTTGTAGACCTCGG 8472 |||| ||| | ||| ||||| ||||| || | | || || |||||||||||||||| Sbjct 478 GGTCGCGCAGTATGCGAAACAGATTCACGACATATTCATCAAGATCGTTGTAGACCTCGG 419 Query 8473 CGTAGCTGCGGGCCTTCCGCAGCAGGACAGAAGCCGCGCCGCCGAAAGGCTCGATGTAGG 8532 | | ||| || | ||| | ||||| || || ||||| |||||||| || |||| || Sbjct 418 CTTCGCTTCGCGGTTTCTGAAGCAGAACGGATGCCGCACCGCCGAAGGGTTCGACATAAC 359 Query 8533 TGTGGTGGGGCGCGAGGTGCTGGATGATCCACGGGGCGAG 8572 |||| || | || || | || ||||| |||||||| Sbjct 358 AACGGTGTGGGGGGAAATGTTCAATAATCCAGGGGGCGAG 319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 208168096754800