Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq55041 199 6e-47 seq55040 95.1 2e-15 >seq55041 Length=500 Score = 199 bits (220), Expect = 6e-47 Identities = 192/244 (79%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||| |||||| || |||||||| || || |||||||| |||| Sbjct 282 CGCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATTACCAAGCCCGCTA 224 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| |||||||||||||| ||||||||| |||||| || |||| ||||||| Sbjct 223 TCCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAAGAGA 164 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| |||| | |||| |||||| || ||||| | ||| || || ||| || | Sbjct 163 CTCGTACTGTTCTCAAGACTTTCCTCGAGGGTGTTATTCGTGACGCCGTCACCTACACTG 104 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||||||||||||| | || | |||||||| |||| || || | Sbjct 103 AGCACGCCAAGCGCAAGACTGTCACCTCCCTCGACGTTGTCTATGCTCTGAAGCGACAGG 44 Query 16671 GCCG 16674 |||| Sbjct 43 GCCG 40 >seq55040 Length=602 Score = 95.1 bits (104), Expect = 2e-15 Identities = 83/98 (85%), Gaps = 4/98 (4%) Strand=Plus/Minus Query 16436 AAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCG 16494 ||||| || |||| ||| |||||| || | |||||| || ||||||||||| || ||||| Sbjct 600 AAGCGCCACCGCAAGAT-TCTTCGTGACA-CATCCAGGGCATCACCAAGCC-GCCATCCG 544 Query 16495 TCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||||| |||||||||||||| ||||||||| |||||| Sbjct 543 CCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78956065797900