Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq38548 87.8 2e-12 seq68693 86.0 8e-12 seq2328 86.0 8e-12 >seq38548 Length=639 Score = 87.8 bits (96), Expect = 2e-12 Identities = 73/88 (83%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 165215 GAGTTGCCCAAGTGGCGGAATTGGTAGACGCGCTGGGTTTAGGTTCCAGTGAATTAATTC 165274 |||||||||| |||||||||||||||||||| || | || |||| | || | ||| | Sbjct 591 GAGTTGCCCAGGTGGCGGAATTGGTAGACGCACTAGTTTCAGGTACTAGCG-GGTAAACC 533 Query 165275 GTGGAGGTTCAAGTCCTCTCTTGGGCAC 165302 |||||||||| ||||||||| ||||||| Sbjct 532 GTGGAGGTTCGAGTCCTCTCCTGGGCAC 505 >seq68693 Length=654 Score = 86.0 bits (94), Expect = 8e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 164824 CGCGGGATGGAACAGTCTGGTAGTTCAGCGGTCTCATAAGCCGCAGGTCGTGGGTTCAAA 164883 ||||||||||| ||||||||||| || ||| ||||||| ||| ||||||| |||||||| Sbjct 547 CGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCAAA 606 Query 164884 TCCCACTCCCGCTCCCATTTCAAAA 164908 ||| ||||||| ||| ||| || Sbjct 607 TCCTGCTCCCGCAACCACCTCAGAA 631 >seq2328 Length=12646 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 164824 CGCGGGATGGAACAGTCTGGTAGTTCAGCGGTCTCATAAGCCGCAGGTCGTGGGTTCAAA 164883 ||||||||||| ||||||||||| || ||| ||||||| ||| ||||||| |||||||| Sbjct 8388 CGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAA 8447 Query 164884 TCCCACTCCCGC 164895 ||| ||||||| Sbjct 8448 TCCAGCTCCCGC 8459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626945197120000