Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_006949.1 Length=46900 Score E Sequences producing significant alignments: (Bits) Value seq56734 219 1e-52 seq69099 215 2e-51 seq39396 163 9e-36 seq78523 138 3e-28 seq44328 129 2e-25 seq43325 122 3e-23 seq58711 120 9e-23 seq56092 120 9e-23 seq29027 116 1e-21 seq59838 114 4e-21 seq64133 93.3 1e-14 seq64132 93.3 1e-14 seq76763 89.7 2e-13 >seq56734 Length=385 Score = 219 bits (242), Expect = 1e-52 Identities = 214/276 (78%), Gaps = 0/276 (0%) Strand=Plus/Minus Query 26459 ACCAAAAATCGAGTCAATTTGTCGAGCATGTTCAGTCAGGTGATTTGGTGCCAGATGAGC 26518 ||| |||| |||||||| | || |||||||| |||||||| || |||||||| || || Sbjct 290 ACCCAAAAGAGAGTCAATCTTGCGCGCATGTTCGGTCAGGTGGTTAGGTGCCAGGTGTGC 231 Query 26519 ATATCTGCGAACCATTTCGATAGACTCCCAGCCACCCATTTCCTGCAATACCGAAATCGG 26578 ||| ||||| ||||||||||| ||||| || ||||||||||||||| |||||| || Sbjct 230 ATACCTGCGTACCATTTCGATGCTTTCCCATCCTCCCATTTCCTGCAATGCCGAAAGTGG 171 Query 26579 AACGCCAGCCTGAACTAACCAACTTGCCCACGTGTGCCTCAGGTCATGAAAACGGAAGTC 26638 |||||| ||||||| | ||| |||||||| || || | | ||||||||||||||| || Sbjct 170 AACGCCTGCCTGAATCAGCCAGCTTGCCCAGGTATGACGTAAGTCATGAAAACGGAAATC 111 Query 26639 TTCAATGCCCGCTCGTTTTAATGCTGCCCTCCATGCCGTATTAGCGTCATAGCGCATCTT 26698 |||||||| || || || | | || || ||| ||||| ||| | ||| ||||||| || Sbjct 110 CTCAATGCCTGCCCGCTTGAGTCCTATCCGCCACGCCGTGTTATCATCACAGCGCATTTT 51 Query 26699 CCTCACTACAGGTGATTTAGTTCCGTCTGGTTTGGT 26734 ||| || || | || || ||||||||| |||| Sbjct 50 CCTGACAGATGGCGTCTTGGTGCCGTCTGGTCTGGT 15 >seq69099 Length=964 Score = 215 bits (238), Expect = 2e-51 Identities = 234/307 (76%), Gaps = 4/307 (1%) Strand=Plus/Plus Query 31 TTCTGTCAGGCATACATCGAAACGGGTAATGCTTCTGAGGCTTATCGGACGGCGTATGCT 90 |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 461 TTCTGTCAGGTATACATCGAAACGGGTAATGCTTCAGAGGCTTATCGGACGGCGTATGCT 520 Query 91 GCTGACAAGATGAAGCCGGAGGTAGTACATGTTCAAGCATGTAAGTTGCAGGATAACCCT 150 |||||||||||||| || || | | |||| ||| | |||| |||||| ||| | Sbjct 521 GCTGACAAGATGAAACCCGAAGCAATACACGTTAAGGCATCCGAGTTGCTTTCAAACGGT 580 Query 151 AAGATAGCCCTAAGGATAAAAGAATTGAGGGGCGAGATTAAGCAACGC--CATAACGTCA 208 ||| || | ||||| | ||||| | || || | |||| | ||| ||| | |||| Sbjct 581 AAGGTAACGGTAAGGGTCGCTGAATTAAAGGCTGA-AGTAAG-AGCGCGGCATGATGTCA 638 Query 209 CCGTCGATTCTCTCCTCGCTGAACTGGAAGAGGCCAGACAAAAAGCCTTAAGCGCCGAGA 268 | || ||||| ||| | ||| ||||||||||| || || ||| |||| || || | Sbjct 639 CAGTTGATTCCCTCATTCGTGAGCTGGAAGAGGCAAGGCAGGCAGCTTTAACTGCAGAAA 698 Query 269 CGCCACAATCATCTGCAGCTGTAGCGGCGACAATGGGTAAGGCTAAGCTGGTCGGCCTTG 328 | || || ||||| ||||||||||| || || ||||| || || |||||| || |||| Sbjct 699 CTCCTCAGTCATCCGCAGCTGTAGCCGCAACGATGGGCAAAGCAAAGCTGACAGGGCTTG 758 Query 329 ATAAGCA 335 ||||||| Sbjct 759 ATAAGCA 765 >seq39396 Length=387 Score = 163 bits (180), Expect = 9e-36 Identities = 182/239 (76%), Gaps = 3/239 (1%) Strand=Plus/Plus Query 26460 CCAAAAATCGAGTCAATTTGTCGAGCATGTTCAGTCAGGTGATTTGGTGCCAGATGAGCA 26519 || |||| | |||||||| || || | ||||||||||| || |||||||| || ||| Sbjct 152 CCTAAAAGTGCGTCAATTTTGCGTACAAGCTCAGTCAGGTGGTTAGGTGCCAGGTGTGCA 211 Query 26520 TATCTGCGAACCATTTCGATAGACTCCCAGCCACCCATTTCCTGCAATACCGAAATCGGA 26579 || ||||| |||||| | || | ||||| || |||||| |||| ||| | |||| ||| Sbjct 212 TACCTGCGTACCATT-CTAT-GCTTCCCATCCGCCCATT-CCTGTAATGCAGAAAGTGGA 268 Query 26580 ACGCCAGCCTGAACTAACCAACTTGCCCACGTGTGCCTCAGGTCATGAAAACGGAAGTCT 26639 || || ||||||| | ||| |||||||| || |||| | ||||||||||||||| || Sbjct 269 ACACCTGCCTGAATAAGCCAGCTTGCCCAGGTATGCCGTAAGTCATGAAAACGGAAATCC 328 Query 26640 TCAATGCCCGCTCGTTTTAATGCTGCCCTCCATGCCGTATTAGCGTCATAGCGCATCTT 26698 |||||||| || || || | | || || ||| ||||| ||| | ||| ||||||| || Sbjct 329 TCAATGCCTGCCCGCTTGAGTCCTATCCGCCACGCCGTGTTATCATCACAGCGCATTTT 387 >seq78523 Length=652 Score = 138 bits (152), Expect = 3e-28 Identities = 302/445 (68%), Gaps = 7/445 (2%) Strand=Plus/Minus Query 27231 TTTGTCATCTTCTGGATGGCGGAGTAAATCTTCGTTTCGGTAATATCTTTCAACTGAATC 27290 || |||||| | || |||| ||||||||| | || |||||||| |||| | | || Sbjct 442 TTGGTCATCCTGCTGACCGCGGCGTAAATCTTTGCCTCAGTAATATCCTTCAGCAAACTC 383 Query 27291 CCTGCAAAATGCTGGAGCCAGAATCCTATCCGGCTTTTGTCATCGTCCAGCGACTTCTTA 27350 ||| ||| || ||||||||||| ||||||| |||||| | ||||| || || || Sbjct 382 CCTC--AAACGCATAAGCCAGAATCCAATCCGGCCTTTGTCCGCATCCAGAGA-TTATTG 326 Query 27351 TGCGCCTTCTCCTCTAACCACCTGACACAGGCTTCCTCAAAAGTCATGTCAGGCGTCTCG 27410 |||||||| || || | ||| | | |||||| || |||| |||| ||| || | || Sbjct 325 TGCGCCTT-TCTTCCAGCCAGCGCAGACAGGCCTCTTCAAC-GTCACGTCCGG-GAATCC 269 Query 27411 CCTAATTTACTTACCCTCCATGCTTCGGCCTTCAGCCTGTCATGAAGCTCCGTGGCCTGC 27470 || | | || | ||| || ||||| || || || | |||| |||||| Sbjct 268 CCGAGTCGCTCTATTCGCCAGAGCTCTGCCTTTCTCCGATCGTGCAACTCCTGTGCCTGC 209 Query 27471 CTTTTGTCCTTTGTCCCAAGAGACTGCTTAAATCTTTTGCCGTCCGGCAATGTGAAACTG 27530 || ||||| ||| |||||||| | |||| | || || | | | ||| |||| Sbjct 208 TTTCGGTCCTCTGTGCCAAGAGATTCTTTAATGCGCTTCCCTCCTGACGTCGTGTAACTC 149 Query 27531 GCGTACCAGGTTTCACCTCTGCGGAATAGTGACATTTCAGTTCCTCTGTTATGCCATCAC 27590 | |||||| |||||||||||| | ||||| || ||| | ||| ||| Sbjct 148 CCATACCAGACGGAACCTCTGCGGAAGATCGACATGATTTTTTCTCCCATGTGC-ATCTG 90 Query 27591 CCGCGCTCACGGCGACAGTATGCATCGGAGACTGAAGAGCCGCAATGCAGGCTTGTCGTG 27650 |||||||||||| |||||| ||||| ||| | ||||| ||||| || || || || | Sbjct 89 CCGCGCTCACGGTGACAGTGTGCATTGGATTATTGAGAGCGGCAATACATGCCTGGCGCG 30 Query 27651 TAGTGAGGTATGGGGATTTAGGTTT 27675 | |||||| || || ||||| || Sbjct 29 TTAAGAGGTAGGGTGACTTAGGCTT 5 >seq44328 Length=3229 Score = 129 bits (142), Expect = 2e-25 Identities = 148/195 (76%), Gaps = 3/195 (2%) Strand=Plus/Minus Query 26751 ACGAACACCCATTTGTGA-TGATTGCCGATTTGCTTTTTCAGCACCCGGCAAGCGGTATC 26809 ||||| |||||| |||| ||||| || || |||| |||||||||||||| |||||||| Sbjct 3210 ACGAA-ACCCATC-GTGAATGATTTCCTATCTGCTCCTTCAGCACCCGGCATGCGGTATC 3153 Query 26810 ATTCAGCGCCACTCCAATGGCATGATTAGACTTGCTTTGTTCCGGGTGTATCCATGCCAC 26869 |||||||||||| ||||| || | | ||| | ||||| | |||||||||||| Sbjct 3152 ATTCAGCGCCACGCCAATAGCCTTGCCCGCTTTGGCGTTCTCCGGATTTATCCATGCCAC 3093 Query 26870 CTTTCGTTGCATGTCTATCTGCTGCCACTCCAGATTGATAATGTTAGACCGCCTTAAGCC 26929 ||| | |||||| || | |||| ||| ||||||| | |||||| || || | ||| || Sbjct 3092 CTTCCTTTGCATATCAACCTGCGTCCATTCCAGATCCAGAATGTTTGAACGGCGTAACCC 3033 Query 26930 AGTAGAAAGCGCAAA 26944 || || || ||||| Sbjct 3032 GGTGGAGAGAGCAAA 3018 >seq43325 Length=1326 Score = 122 bits (134), Expect = 3e-23 Identities = 159/216 (74%), Gaps = 3/216 (1%) Strand=Plus/Minus Query 36240 ATCATCGGATATTGTGGGTTTAATGGTTTTAAAAACTTTCGGCCTGCATCCATAACTAAT 36299 ||||| |||| | || ||||| ||||| | | | ||| | || ||||| | | | Sbjct 444 ATCATGTGATAATTGGGATTTAAAGGTTTGAGATATTTTTGCCCAGCATCAACGATATAC 385 Query 36300 TTTTTGAATGTGGCCTCGTTTTCACCTTCTAATTTTGCAACAACCAGCTTGCCGTTTCTT 36359 ||||| ||||| || || |||| | || | |||||||||||||| | || | | Sbjct 384 TTTTTAAATGTTGCTTCATTTTGAGACTCGAGCTTTGCAACAACCAGTCTTCCACTGGTG 325 Query 36360 GGTTCGACTTCGGGATCAACCAGAATTATCATTCCTTCTGGAATGCTTAACCCTGCCGGT 36419 ||||||| |||||||||||| |||| ||||||||||||||||||||||||||| | Sbjct 324 GGTTCGATCGCGGGATCAACCAAAATT-TCATTCCTTCTGGAATGCTTAACCCTGTTGAA 266 Query 36420 GCTGTCATAGAGTCACCTTGGAC-ATCAAGCCAAAA 36454 || ||||| || || |||| ||| |||| |||||| Sbjct 265 GCGGTCATTGAATCCCCTTTGACGGTCAA-CCAAAA 231 >seq58711 Length=2300 Score = 120 bits (132), Expect = 9e-23 Identities = 120/153 (78%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 22985 GCCGACCAGTTCGGTGTTTATAGCGGTAGCGATCCGGGTAATTACAAGGCTGCATT-TCT 23043 || |||||||||||| |||||||||| ||| || | || ||||||||| || || ||| Sbjct 1864 GCTGACCAGTTCGGTATTTATAGCGGAAGCAATGCCGGAAATTACAAGCTGGCCTTCTCT 1805 Query 23044 GGTATCTAACGGGCAGGTATTCATCAACGATGCTTTTATCAATTATGCGTCCATAACCCT 23103 || ||||||||| || || |||| || || | || ||||| || ||||| ||||| Sbjct 1804 ACCAT-TAACGGGCAAGTGTTTATCAGTGACGCCCTAATTAATTACGCCTCCATCACCCT 1746 Query 23104 TGCCAAGGTTGGCTCATGGTATTCAGCCAATTA 23136 |||||||| ||||||||||| ||||| ||||| Sbjct 1745 AGCCAAGGTCGGCTCATGGTACTCAGCTAATTA 1713 >seq56092 Length=894 Score = 120 bits (132), Expect = 9e-23 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 37319 CGATGGAAAGGCGATTTCATTCCAAAGATGGGGATGTTATTGGCGGTTCTGGAGTGGGGT 37378 || |||||| |||| | | || ||| | | |||||| | || || ||||||||||| Sbjct 479 CGCTGGAAACGCGACTGGCTGCCGAAGTTCGCAATGTTACTTGCAGTGCTGGAGTGGGGA 420 Query 37379 GTCGAGGATGAGGAGTTGGCAGAACTGGCAAAGAAAGTTGCGCATCTGCTGACAAAAGAA 37438 ||| ||||| ||| |||| | | || | | || || | |||||||||||| Sbjct 419 ATCGTTGATGACGAGATGGCTCATTTAGCGCGGCAGGTGGCAATGATACTGACAAAAGAA 360 Query 37439 AAGCCCCAAGACTGCGGGAACAGTTTTGAGGCCTGATGTAGAAGGACTGGATCAATCCAC 37498 ||||| |||| |||| ||||| |||||||| ||||| || |||||||||||| ||| Sbjct 359 AAGCCTCAAGT-TGCGCGAACAACTTTGAGGC-TGATGCGAAATGACTGGATCAATTCAC 302 Query 37499 AGGAGTAATTATGCCAAA 37516 |||||||||||||||||| Sbjct 301 AGGAGTAATTATGCCAAA 284 >seq29027 Length=2418 Score = 116 bits (128), Expect = 1e-21 Identities = 235/348 (68%), Gaps = 8/348 (2%) Strand=Plus/Plus Query 32900 CCACCAAGCATTTGCATGGTTCCACTAACGCCAACGATGACTTCGGTAGTGAACCGATTC 32959 ||||| ||||| |||||||| || | ||| || | || || || ||| | || | | Sbjct 828 CCACCCAGCATCTGCATGGTGCCGCCCACGTTGACAACCACCTCCGTGGTGTAACGTTCC 887 Query 32960 TGTCCACTTTGGTCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGAG 33019 || || | || ||||||||||| | || |||| | |||||||| ||| |||| ||| Sbjct 888 TGACCGCCCTGATCCTGCCATTTACGGGTGCGCAGCTGGCCTTCAATATACACCTGAGAA 947 Query 33020 CCTTTTCGCAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATCACCACACGGTGC 33079 ||||| ||||| || || | || | ||| |||||||| || || ||| ||||||||| Sbjct 948 CCTTTACGCAGGTATTCCCCCGCCACTTCCGCCAGTTTGCCAAACAGCACGACACGGTGC 1007 Query 33080 CACTCCGTCTGCTCCTTTTGCTCGCCAGTATTTTTATCTCGCCATTGTTCTGACGTAGCT 33139 || || || ||| || | || || || | || || ||||| || || ||||| Sbjct 1008 CATTCGGTGATCTCTTTGTTTTCACCGGTCTGCTTGTCGCGCCAGCTCTCAGAGGTAGCC 1067 Query 33140 ATTGTCAGGTTAGCGAACGCTGTTCCTGATGGTGAGTATCTAACTTCCGGGTCTTGTCCA 33199 | || | ||| |||| || || ||| ||| | |||||||| || || || Sbjct 1068 AGCGTAATGTTGGCGACAGCGCCACCATTTGGCATGTAACGTACTTCCGGATCCTGACCC 1127 Query 33200 A----CCCGACAAAGGATAATCACCTTATTTACGCCTCTGCTTGCCAT 33243 | ||||||| | |||||| || || ||||| | || ||||| Sbjct 1128 AGATTCCCGACA----AGAATCACTTTGTTAACGCCACGACTGGCCAT 1171 >seq59838 Length=649 Score = 114 bits (126), Expect = 4e-21 Identities = 101/126 (80%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 26435 GTGGGACATATTTGGGACAGAAGTACCAAAAATCGAGTCAATTTGTCGAGCATGTTCAGT 26494 |||||||| |||||||||| | | |||||||||| ||||||||| | ||||| || || Sbjct 622 GTGGGACAGATTTGGGACACGACTGCCAAAAATCGCGTCAATTTGCCTCGCATGCTCTGT 563 Query 26495 CAGGTGATTTGGTGCCAGATGAGCATATCTGCGAACCATTTCGATAGACTCCCAGCCACC 26554 ||| ||||| |||||||| |||||||| | ||||||||||||| ||| || || || Sbjct 562 CAGATGATTCGGTGCCAGGTGAGCATAGCGCTGAACCATTTCGATGCTCTCTCATCCGCC 503 Query 26555 CATTTC 26560 ||| || Sbjct 502 CATCTC 497 >seq64133 Length=746 Score = 93.3 bits (102), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 3/135 (2%) Strand=Plus/Minus Query 45419 GGTAAATCCACCTCCGCCGCCAGCGTGGATAATGCATCCCGCCCCAGACTGGCAGACTCC 45478 ||||||||| |||||| || |||||||| ||| | ||||| |||| ||||| || Sbjct 287 GGTAAATCC---TCCGCCACCCGCGTGGATGATGATGGCAGCCCCCGACTTACAGACGCC 231 Query 45479 GCTCAACGGGATTATTTCACCCTCAAAGAGCGAGTGACAACAATGCAAAAGCAACTGGAA 45538 ||||| ||||||||||||||||||| ||||||| | ||| | |||||||||| Sbjct 230 GCTCAGCGGGATTATTTCACCCTCAGAGAGCGAATCGAAACCGTCACAAAGCAACTGACT 171 Query 45539 GGGGCGCAGGACTAT 45553 || ||||||||| Sbjct 170 GGCCTACAGGACTAT 156 >seq64132 Length=632 Score = 93.3 bits (102), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 45419 GGTAAATCCACCTCCGCCGCCAGCGTGGATAATGCATCCCGCCCCAGACTGGCAGACTCC 45478 ||||||||| ||||||| || |||||||| ||| | ||||| |||| ||||| || Sbjct 204 GGTAAATCC--CTCCGCCACCGGCGTGGATGATGATGGCAGCCCCCGACTTACAGACGCC 147 Query 45479 GCTCAACGGGATTATTTCACCCTCAAAGAGCGAGTGACAACAATGCAAAAGCAACTGGAA 45538 ||||| |||||||||||||||||| ||||||| | ||| | |||||||||| Sbjct 146 GCTCAGTGGGATTATTTCACCCTCAGAGAGCGAATCGAAACCGTCACAAAGCAACTGACT 87 Query 45539 GGGGCGCAGGACTAT 45553 || ||||||||| Sbjct 86 GGCCTACAGGACTAT 72 >seq76763 Length=785 Score = 89.7 bits (98), Expect = 2e-13 Identities = 101/135 (75%), Gaps = 3/135 (2%) Strand=Plus/Minus Query 45419 GGTAAATCCACCTCCGCCGCCAGCGTGGATAATGCATCCCGCCCCAGACTGGCAGACTCC 45478 ||||||||| ||||| || |||||||| ||| | ||||| |||| ||||| || Sbjct 685 GGTAAATCCTCCTCCACCC---GCGTGGATGATGATGGCAGCCCCCGACTTACAGACGCC 629 Query 45479 GCTCAACGGGATTATTTCACCCTCAAAGAGCGAGTGACAACAATGCAAAAGCAACTGGAA 45538 ||||| ||||||||||||||||||| ||||||| | ||| | |||||||||| Sbjct 628 GCTCAGCGGGATTATTTCACCCTCAGAGAGCGAATCGAAACCGTCACAAAGCAACTGACC 569 Query 45539 GGGGCGCAGGACTAT 45553 || ||||||||| Sbjct 568 GGCCTACAGGACTAT 554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149726367493200