Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_007023.1 Length=180500 Score E Sequences producing significant alignments: (Bits) Value seq33499 502 3e-137 seq31280 248 1e-60 seq33108 174 2e-38 seq62284 123 3e-23 seq103771 107 2e-18 seq36028 100 3e-16 seq34305 89.7 6e-13 >seq33499 Length=26748 Score = 502 bits (556), Expect = 3e-137 Identities = 622/845 (74%), Gaps = 21/845 (2%) Strand=Plus/Minus Query 80573 TTACGAGAATCGAAAATCACTTTGCCAGCGTAATCAGAACCCATGACAGTTTGAGGTACA 80632 ||||||| ||| | ||||| || || |||| ||| ||| || || ||||| |||||| Sbjct 24093 TTACGAGCATCCATAATCAACTTACCTTCGTAGTCACCACCAATAACTGTTTGTGGTACA 24034 Query 80633 CCACCTTG-TAGCGGGTAGAGTAGTTCATCTGTACATCCAGTTCTTTCCAGCGGATCATT 80691 |||||||| || || ||||| | || || |||| |||||| || ||||| Sbjct 24033 CCACCTTGGTATTTCTCAGCACGTTTCATTTCAACTTCGAGTTGTTTCCAACGAATCATC 23974 Query 80692 TCTGGTGTAATGGTGCGCTGCAACACGGCGTTCGCTTCTGCTTCTTTACGGGCCGCATAC 80751 ||||| || || || ||||||||| ||| ||||| |||||||| | || ||||| Sbjct 23973 TCTGGAGTGATTGTTTTCTGCAACACACTGTTAGCTTCAGCTTCTTTTTGAGCAGCATAT 23914 Query 80752 AGTTTAGCATCAGCATCACGTTCGTTTGCGAGTGCTTCATTTTCACGCGCCTGACGATTT 80811 | ||||||||| ||||| ||||||||||| | |||||||| | ||| || | |||| Sbjct 23913 AATTTAGCATCTGCATCTCGTTCGTTTGCCTGGGCTTCATTATTACGGGCTTCTCGATCA 23854 Query 80812 GCTTCTGCCTGTTTTACCTG-TTGTTGAGAAGTTTGCTCAACCT--TCG--CCAGTTCAG 80866 || ||||||| | ||| ||| ||| || | || || | || ||| |||| |||| Sbjct 23853 GCCTCTGCCT-TCTTAACTGCTTGCTGTG----TTTCTTTAGCTACTCGGTCCAGATCAG 23799 Query 80867 CACGAGCGGCGTTAACCTGTTCTTCACGGATCTTCGTGTTAGTTACCTGTTCCATGATAA 80926 | | || |||||||||||||||||||| ||||| || || |||||||| | |||||| | Sbjct 23798 CCTGTGCTGCGTTAACCTGTTCTTCACGAATCTTTGTATTTGTTACCTGCTTCATGATTA 23739 Query 80927 CATCTGGCAGGGTAATATCCTGCAAGAATACCTGTTTCACGGTGTAACCATACGGTCGCG 80986 |||| |||| ||| ||||| |||||||| | | ||| || || |||||||| || || | Sbjct 23738 CATCAGGCAAGGTGATATCTTGCAAGAAGATTTCTTTTACAGTATAACCATAAGGACGTG 23679 Query 80987 CATACTCTTCAACTTCC-----TGCTGAATCGCAGTTTGCAACTGGTTCTGGATCTTTGC 81041 | || |||||| ||| | ||||||| |||||||| ||| |||| || Sbjct 23678 CGTAGGCTTCAATTTCAGCTTTTACTGAATCC-----TGCAACTGCGCCTGAATCTCAGC 23624 Query 81042 GTCGAACAGATCCTGTGCTTTCGGAACTGATTTACCGAATTCGCGAACAGTGGACAGCAA 81101 || ||||| ||||||||||||||| ||||||||||| || || || |||||||| | | Sbjct 23623 GTTGAACAAATCCTGTGCTTTCGGGACTGATTTACCAAACTCTCGGACAGTGGATAAAAG 23564 Query 81102 TTTTTCGGTTACGTATTTATCCAGAGCTTGTTCCTGGTCGCCAGCGTTGATACGGTTAAT 81161 |||| || ||||||||||||||||| || || ||| || || || ||||| || Sbjct 23563 CTTTTGCTCAACATATTTATCCAGAGCTTGCTCTTGAGTGCCTGCATTAATTCGGTTCAT 23504 Query 81162 CGGTGCTTTGTTACCGTCGAATTGCAACATCACGGTCATGTCAACAGTCGATTTAAATTT 81221 ||||| || ||| || || |||||||| |||||||| || || || |||||||| || Sbjct 23503 AGGTGCCTTAGAACCATCAAACTGCAACATAACGGTCATATCCACTGTTGATTTAAACTT 23444 Query 81222 ATCCTGGGACGGAACCTGCAACTTGTCGAATTTCTTCGCGATATCTTTCGTACTGAAAGT 81281 |||||| ||| || ||||| || || || | | ||||||||| ||||||||||| Sbjct 23443 ATCCTGACTCGGTACTTGCAATTTATCATATGTTATTTTGATATCTTTTGTACTGAAAGT 23384 Query 81282 ATCGAAGTCAGCCAGTGGGTTTACGATATGGAAACCAGGCATGACAGGTTTCGGAGAAAC 81341 || ||| || | |||||| || | |||||| || ||| | ||||| || ||| ||| Sbjct 23383 CTCAAAGCTTGCAAATGGGTTAACCACATGGAACCCTGGCTTTACAGGATTAGGATTAAC 23324 Query 81342 TTTACCCATAAAGGTCTGGGTTTTGACCGTACCGTCCTGTACGATGGTAAAGGAGTTCGG 81401 ||||||||||||||| || ||||| || ||||| || || |||||| || |||| || | Sbjct 23323 TTTACCCATAAAGGTTTGTGTTTTTACTGTACCATCTTGCACGATGATATAGGAATTTAG 23264 Query 81402 AACCA 81406 | ||| Sbjct 23263 AGCCA 23259 >seq31280 Length=10079 Score = 248 bits (274), Expect = 1e-60 Identities = 560/832 (67%), Gaps = 30/832 (4%) Strand=Plus/Minus Query 41598 TGAATT-CTCTTACGCTGGCGTACAGCAGTTGATCGGGAAATATCTGTTGCAGGATCGCA 41656 |||||| ||| ||||| | ||| | ||| || || ||||||||| | ||| | ||| Sbjct 1939 TGAATTTCTCCTACGCGGCCGTGAAACAGCTGGAAGGCAAATATCTGGTTCAGAACCGCG 1880 Query 41657 CCAACGGTGACATCTACGAAACACCGCAATATGCGTTTATGCTGATTGCTATGTGTCTGC 41716 | |||||| |||||||||| | || | || || ||| | || || ||| Sbjct 1879 TCTCCGGTGAGATCTACGAAAGCGCCCAGTTCCTGTACATTCTGGTAGCCGCCTGCCTGT 1820 Query 41717 A-TCAGGACGAACCGCGA---ACCCTGAGCGCATTTAATCATGTTGTCGATTTCTACAAC 41772 ||||| | | ||||| |||| || | ||| |||| | || ||||||| | Sbjct 1819 TCTCAGG-CTATCCGCGTGCGACCCGGATGG-ATTACATCAAG----CG-TTTCTACGAT 1767 Query 41773 GCAATTTCGGATCGTAAGCTGTCGTTACCTACGCCTATTATGGCTGGTGTGCGTACTCCT 41832 || ||||| ||| | || | || ||||| || ||| | || |||||||| || Sbjct 1766 GCGATTTCCACGTTTAAAATCTCCCTGCCGACGCCAATCATGTCGGGAGTGCGTACGCCA 1707 Query 41833 ACGCGTCAGTTTTCCAGTTGCGTAGTGATTGAATCAGGTGATTCACTGGGTTCTCTGAAT 41892 || |||||||| | || || ||||||||| || || |||| ||| | || Sbjct 1706 ACCCGTCAGTTCAGCTCCTGTGTCCTGATTGAATGTGGCGACAGCCTGGATTCCATCAAC 1647 Query 41893 GCTGTAACCTCT---GCGATCGTGAAGTATATTTCACAACGCGCGGGTATCGGTGTTAAT 41949 || ||||| || || ||||| || ||||||||||||| ||||| ||| |||| Sbjct 1646 GCG---ACCTCCAGCGCTATTGTGAAATACGTTTCACAACGCGCAGGTATTGGTATTAAC 1590 Query 41950 GCTGGACACATTCGCGCAATGGGTTCTAAAATCCGTGGTGGTGAAGCAGTACATACAGGC 42009 || || | || ||||| |||| || || || |||||||| | ||||| || Sbjct 1589 GCGGGTCGTATCCGCGCGCTGGGCAGCCCGATTCGCGGCGGTGAAGCTTTCCATACCGGT 1530 Query 42010 GTGATCCCGTTCTGGAAACATATTCAGACAGCGGTTAAATCCTGTTCACAAGGTGGCGTT 42069 |||||||||| || || | ||||||||||| ||||||||||| || || ||||| Sbjct 1529 TGTATCCCGTTCTACAAGCACTTCCAGACAGCGGTGAAATCCTGTTCGCAGGGCGGCGTC 1470 Query 42070 CGTGGTGGTGCTGCAACGTTGTATTATCCGATCTGGCATTTGGAAGTTGAAAACCTGCTG 42129 ||||| || || || ||| ||| |||||||| |||||| ||||||| |||| |||| | Sbjct 1469 CGTGGCGGCGCAGCGACGCTGTTCTATCCGATGTGGCATCTGGAAGTAGAAAGCCTGTTA 1410 Query 42130 GTTCTGAAAAACAACAAAGGTGTTGAGAATAACCGTATTCGTCACCTGGATTATGGCGTT 42189 || |||||||||||| ||||| || |||||| | |||||| |||| || || || Sbjct 1409 GTCCTGAAAAACAACCGTGGTGTGGAAGGTAACCGCGTACGTCACATGGACTACGGTGTG 1350 Query 42190 CAGCTTAACGATTTGATGTATAAGCGTTTAATCAATAACGATTACATCACACTGTTCAGC 42249 ||||| ||| | ||||||| |||| | | || ||| ||||||| ||||| ||| Sbjct 1349 CAGCTCAACAAAATGATGTACCAGCGCCTGCTGAAGGGCGAGGACATCACGCTGTTTAGC 1290 Query 42250 C---CTGACGTTGCAAATGATCGCCTGTATGATGCTTTCTATCAAGCTGATCAGACTGAG 42306 | | ||||| | | ||||||| ||||| |||| | || |||||| || Sbjct 1289 CCGTCAGACGTACC------TGGCCTGTACGATGCGTTCTTT---GCCGATCAGGACGAA 1239 Query 42307 TTCGAAGAACTCTATACCAGTTTGGAAAAAGACCCAACGGTACGCAAGAAACGCATTAAA 42366 || ||| || || |||| | ||| ||||| | | || ||| | || | ||| Sbjct 1238 TTTGAACGTCTTTACACCAAATACGAACAAGACAGCAGCATTCGTAAGCAGCGTGTGAAA 1179 Query 42367 GCAGCAGACTTATTCCAGTTGCTTGTTCAGGAACGCGCACAGACCGGACGCA 42418 || | ||| | ||| | || | | ||||||||||| ||||| |||| Sbjct 1178 GCGGTAGATCTGTTCTCGCTGATGATGCAGGAACGCGCCTCTACCGGCCGCA 1127 >seq33108 Length=3479 Score = 174 bits (192), Expect = 2e-38 Identities = 146/179 (82%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 51920 GTTGAAGGTGGACAGCACCTAAACGTGAATGTGCTACGTCGCGAAACCCTGGAAGATGCT 51979 || ||||| || |||||| ||||||| || || || || || ||||| |||||||| || Sbjct 2783 GTGGAAGGCGGGCAGCACTTAAACGTTAACGTCCTGCGCCGTGAAACGCTGGAAGACGCC 2842 Query 51980 GTGAAACATCCTGAGAAGTACCCACAGTTAACGATCCGCGTTTCAGGTTATGCAGTTCGC 52039 |||||||||||||||||||| || ||| | || || || ||||| || ||||| || ||| Sbjct 2843 GTGAAACATCCTGAGAAGTATCCGCAGCTGACCATTCGTGTTTCCGGGTATGCCGTGCGC 2902 Query 52040 TTTAATGCACTGACTCCAGAACAACAGCGCGACGTTATCGCCAGAACCTTTACGGAAAG 52098 |||||| | ||||| || ||||||||||| ||||| || ||| | |||||||||||||| Sbjct 2903 TTTAATTCGCTGACGCCTGAACAACAGCGTGACGTCATTGCCCGTACCTTTACGGAAAG 2961 >seq62284 Length=976 Score = 123 bits (136), Expect = 3e-23 Identities = 291/430 (68%), Gaps = 12/430 (3%) Strand=Plus/Minus Query 41797 TTACCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGCGTCAGTTTTCCAGTT---GC 41853 ||||| || ||||||||||||||| | ||||| ||| ||||| || ||||| | Sbjct 486 TTACCAACACCTATTATGGCTGGTTTACGTACAAATACTCGTCAATT---CAGTTCTTGT 430 Query 41854 GTAGTGATTGAATC-AGGTGATTCACTGGGTTCTCTGAATGCTGTAACCTCTGCGATCGT 41912 || || || |||| ||| || || | | | | ||||| | ||||| ||| | Sbjct 429 GTTGTAAT-GAATGTAGGAGACAGCCTAGACAGTATTAGTGCTGGTAATTCTGCAATCAT 371 Query 41913 GAAGTATATTTCACAACGCGCGGGTATCGGTGTTAATGCTGGACACATTCGCGCAATGGG 41972 ||| |||||||| | || || | ||||| ||| ||| | | |||| ||| | || Sbjct 370 GAAATATATTTCTAAGAAAGCTGGACTAGGTGTAAATTATGGTCGCGTTCGTGCAGTAGG 311 Query 41973 TTCTAAAATCCGTGGTGGTGAAGCAGTACATACAGGCGTGA-TCCCGTTCTGGAAACATA 42031 ||| |||| ||||||||||| ||||| || |||||| ||| ||| ||||| || Sbjct 310 TTCAGAAATTCGTGGTGGTGATGCAGTCCACACAGGCTTGATTCCATTTCTGTCGGCAGT 251 Query 42032 TTCAGACAGCGGTTAAATCCTGTTCACAAGGTGGCGTTCGTGGTGGTGCTGCAACGTTGT 42091 || | | | ||| |||||||||| || ||||| ||||| ||||| || ||||| | Sbjct 250 GGCA-AAAACTGTT-AATCCTGTTCTCAGGGTGGTGTTCGAGGTGGAGCAGCAACTGTAC 193 Query 42092 ATTATCCGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAAAACAACAAAGGTG 42151 | | ||| | ||||||| || ||||| | || | || ||| |||| || |||||| Sbjct 192 ACTTTCCACTATGGCATTACGAGTTTGAAGATCTTGTAGTACTG-AAAATAATAAAGGTA 134 Query 42152 TTGAGAATAACCGTATTCGTCACCTGGATTATGGCGTTCAGCTTAACGATTTGATGTATA 42211 || | ||| | | || | |||||| | ||||| ||||| | ||||| Sbjct 133 CAGAAACCTCACGTGTAAGACAGTTAGATTATTGTTTTCAGATTAACAAAACTTTGTATC 74 Query 42212 AGCGTTTAAT 42221 | |||||||| Sbjct 73 AACGTTTAAT 64 >seq103771 Length=482 Score = 107 bits (118), Expect = 2e-18 Identities = 248/370 (67%), Gaps = 3/370 (1%) Strand=Plus/Minus Query 155619 GCCCGTGCATACATCGAATATCGTCACGATCGCGATATTGCCCGTGAACAGAAAAGTAAG 155678 || || || || |||||||| |||||||| || ||| | || || || ||| | ||| Sbjct 371 GCGCGCGCCTATATCGAATACCGTCACGACCGGGATCTGGCGCGCGAGCAGCGCGGCAAG 312 Query 155679 CTGTTCAAAGATATCTCCGGTATGGTGAATCTGTCCAACAAAGAGATCACCAACGAGAAC 155738 ||| | | | || ||| ||||| | | | ||||| | | | |||||| ||| Sbjct 311 CTGCACCATGCCATTCGCGGCCTGGTGGAACAGACCAACGCGGCGCTGCTCAACGAAAAC 252 Query 155739 GCGAACAAACAC-GCAAGGGTATTCCCGACACAGCGCAATTTGCTGGCGGGTATTGTAGC 155797 || |||||| || |||| | || |||||| |||||| | ||||||| || || || || Sbjct 251 GCTAACAAAGACAGCAAAGTGAT-CCCGACGCAGCGCGACCTGCTGGCCGGCATCGTGGC 193 Query 155798 GAAGCATTTCGCCCGTAATCATATCCTTCCGAAACATATCGTAGAAGCGCATGACTCCGG 155857 || |||| |||| | || | || ||| || | || |||||||| || Sbjct 192 CAAACATTATGCCCAGCAGCAGTTGCTGCCGCGCGATGTGGTGCTGGCGCATGAACGTGG 133 Query 155858 CGACATCCACTATCATGATCTGGATT-ACAGCCCGTTCACGCCATACACAAACTGCTGTC 155916 || ||||||||||| || || || | || || ||| || |||||| | Sbjct 132 GGAGATCCACTATCACGACCTCGACTCACTCTCCCTTCTTCCCGATGTTTAACTGCATGC 73 Query 155917 TGGTGGATTTGAAAGGTATGCTGGCTAATGGCTTCAAGATGGGTAACGCAGACATCGAAC 155976 || | ||| || | || |||||| | | |||||||| ||||||||||| || || |||| Sbjct 72 TGATCGATCTGCACGGCATGCTGACGCACGGCTTCAAAATGGGTAACGCCGAGATTGAAC 13 Query 155977 CCCCGAAATC 155986 | || ||||| Sbjct 12 CGCCAAAATC 3 >seq36028 Length=2231 Score = 100 bits (110), Expect = 3e-16 Identities = 119/159 (75%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 44428 TATATCGAACACTTAACCGACCAACGTATGCGAGCGGTTGGGTTACAGTCT-CCGTTTAA 44486 ||||||||| || | ||| || ||||||| |||||||| | | ||| ||||| | Sbjct 795 TATATCGAATACATCACCAACATTCGTATGCAGGCGGTTGGCCTCGA-TCTGCCGTTCGA 853 Query 44487 ACCGAGTCCTAACCCGTATCCGTGGATGAACAAATGGTTGAAGTCTGACAACGTTCAGGT 44546 | || | | |||||| ||| ||||| ||| ||| || ||| || ||||||||||| Sbjct 854 AACGCGCTCGAACCCGATTCCCTGGATCAACGCCTGGCTGGTGTCCGATAACGTTCAGGT 913 Query 44547 AGCCCCGCAAGAGGTTGAAGTAAGTTCTTACCTGGTTGG 44585 |||||||| || || ||||| |||||||||||||| || Sbjct 914 TGCCCCGCAGGAAGTGGAAGTCAGTTCTTACCTGGTGGG 952 >seq34305 Length=2218 Score = 89.7 bits (98), Expect = 6e-13 Identities = 123/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 51921 TTGAAGGTGGACAGCACCTAAACGTGAATGTGCTACGTCGCGAAACCCTGGAAGATGCTG 51980 ||||||| || ||||| || || || || ||| | || |||| || || || Sbjct 770 TTGAAGGCGGCCAGCATCTGAATGTTAACGTGATGAACCGGGAAATGTTGATGGACGCAA 711 Query 51981 TGAAACATCCTGAGAAGTACCCACAGTTAACGATCCGCGTTTCAGGTTATGCAGTTCGCT 52040 || | | |||||||| || || |||||||| ||||||||||| || ||||| ||||||| Sbjct 710 TGGATAACCCTGAGAAATATCCTCAGTTAACCATCCGCGTTTCGGGCTATGCCGTTCGCT 651 Query 52041 TTAATGCACTGACTCCAGAACAACAGCGCGACGTTATCGCCAGAACCTTTAC 52092 |||| | || || ||| || |||| ||||| || || | |||||||| Sbjct 650 TTAACTCGCTCACCAAAGAGCAGCAGCAGGACGTGATTACCCGTACCTTTAC 599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576531442480000