Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26]
130,300 sequences; 87,617,276 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq2641 102 8e-17
seq28556 82.4 7e-11
>seq2641
Length=263
Score = 102 bits (112), Expect = 8e-17
Identities = 139/193 (72%), Gaps = 1/193 (1%)
Strand=Plus/Plus
Query 26805 ATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 26864
|||||| | ||| | ||||| || || ||||| | |||||| || ||| |||
Sbjct 57 ATCACCCTTGAAGTTGAATCTTCGGATACTATCGACAATGTCAAAACCAA-ATTCAAGAC 115
Query 26865 AAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT 26924
|| || || || || |||||||||||| ||||||| | | || || || | ||||||
Sbjct 116 AAGGAGGGTATTCCCCCCGATCAACAACGACTCATCTTTGCTGGTAAGCAGTTGGAAGAT 175
Query 26925 GATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGA 26984
| | ||| | | ||| || |||||||| |||||||||||| | |||||||| || ||
Sbjct 176 GGTCGAACCCTTGCCGATTACAACATTCAGAAAGAATCTACTCTGCATCTGGTTCTTCGA 235
Query 26985 CTTAGAGGAGGAA 26997
||| | || ||||
Sbjct 236 CTTCGTGGTGGAA 248
>seq28556
Length=388
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827
||||||| | || || || || | || || || | ||||| | ||| |||| ||
Sbjct 283 AATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACGCTAGAAGTAGAGTCTTC 224
Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887
|| ||||| || | ||||| ||||| ||||||||||| || ||||| || ||
Sbjct 223 GGATACCATTGACAATGTCAAGTCGAAGATCCAGGACAAAGAAGGCATTCCTCCGGACCA 164
Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947
|| | ||||| | || ||| || || || ||||||| | | | || || || ||
Sbjct 163 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTGGAAGATGGCCGTACCCTCTCTGATTACAA 104
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||||||| || ||||| | || ||||||| ||||| | || ||
Sbjct 103 CATTCAAAAGGAGTCTACCCTTCACTTGGTCCTTCGACTTCGTGGCGG 56
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 477882778616000
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |