Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq8712 183 8e-41 seq97857 176 1e-38 seq117378 114 3e-20 >seq8712 Length=1748 Score = 183 bits (202), Expect = 8e-41 Identities = 399/585 (68%), Gaps = 12/585 (2%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGT-AATCCACAGATGTCTTC 363605 ||||| |||||| |||| ||| | | ||| ||||| || | ||| | ||| |||| || Sbjct 598 TTCACCCACGCCTCGCCCACACTATTCAACGCTGGTACGCCACAATGC-CAGCTGTCATC 540 Query 363606 TTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 ||||| ||| | | ||||||| || |||||| || |||| |||||| || | || Sbjct 539 CTGCTTCCTTGTCGAC-TGAAGGATGACAGCATCGAAGGCATCTATGACACCCTCA-GAC 482 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTG 363724 || || | || ||||||| || ||||| || || | | || ||||| |||||| Sbjct 481 GTGCGCCATGATCTCCAAGATGGCTGGCGGCATCGGCCTGAACG-TCCACCGCATTCGTG 423 Query 363725 C-ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 | || | || ||||| |||||| || ||| || || | |||||||||||| Sbjct 422 CCACTGGCTCGT-ACATTGCCGGCACCAACGGCACCTCAAACGGCGTCGTTCCCATGCTT 364 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843 || ||||| |||| || || || ||||||||||||||||| ||||| || || Sbjct 363 CGCGTGTTCAACAACACCGCCAGATACGTCGACCAGGGTGGCAACAAGCGACCTGGTGCT 304 Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903 || | || || || ||||| || || || | |||||||| || || || || || Sbjct 303 TTGCCCATTTACCTGGAGCCGTGGCACGCAGACGTGTTTGAGTTCCTCGACCTGCGAAAG 244 Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963 ||| || || |||||| | ||||| ||||| || ||| ||| || ||| || | || Sbjct 243 AACCACGGCAAGGAGGAAGTTCGTGCCCGTGACCTCTTCCTTGCTCTATGGATTCCCGAT 184 Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAAT 364021 || |||||||| || || | | | | | ||| | ||| | ||||| |||||| Sbjct 183 TTGTTCATGAAGCGTGTTGA--AAAGAACGGCGACTGGACTCTCATGTGCCCCAACGAAT 126 Query 364022 GTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAAT 364081 | || || | | || | ||||| || | | ||||| |||||||||||||| Sbjct 125 GCCCTGGCTTGGCTGACTGCTACGGTGAGGAATTCGAGGCTCTCTACGAAAAGTATGAGC 66 Query 364082 CGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGT 364126 |||||| | |||||||| |||| ||| |||||||| |||| Sbjct 65 GTGAGGGACGTGGACGTAAGACTATTCGCGCTCAGAAGCTTTGGT 21 >seq97857 Length=911 Score = 176 bits (194), Expect = 1e-38 Identities = 368/541 (68%), Gaps = 7/541 (1%) Strand=Plus/Minus Query 363760 TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAG 363819 || || ||||| | |||||| | || || | |||| || || | |||||||| ||| Sbjct 851 TCCAACGGGCTCATCCCCATGTTACGCGTCTACAACAACACGGCCCGTTACGTCGATCAG 792 Query 363820 GGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATT 363879 ||||| ||||| || || || || || || |||||||| || |||||||| Sbjct 791 GGTGGTAACAAGCGTCCCGGAGCATTCGCAATCTACCTCGAGCCATGGCACGCCGATATA 732 Query 363880 TTTGAGTTTCTTG-AGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCT 363938 |||| | |||||| | || || || ||| || ||||||||| | || || || || | Sbjct 731 TTTG-GCTTCTTGGACCTTCGTAAGAACCATGGCAAAGAGGAAGTTCGCGCTCGCGACTT 673 Query 363939 GTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTG 363998 ||||| || || ||| | | || | || |||||||| || | | | | | || Sbjct 672 ATTCTACGCCCTGTGGATCCCGGATCTCTTCATGAAGCGTGTCCAAGAGAATGGGGAGTG 613 Query 363999 GTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGT 364058 | | || | || || |||| ||||| ||||| | || || | ||||| || | || Sbjct 612 GACTCTGATGTGTCCCAACGAGTGTCCTGGTCTCGCGGACGTCTACGGTGATGAGTTTGA 553 Query 364059 TGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAA 364118 || || ||||||| ||||| || || | |||| |||| ||| ||| ||||| Sbjct 552 GGCCCTCTACGAAAGTTATGAGAAAAAGAACAAAGGTCGTGAGACCGTTCGCGCCCAGAA 493 Query 364119 GCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAA 364178 ||| || ||||||| | || | || | |||||| || | |||| ||| | ||||| Sbjct 492 GCTC--GTATGCCATCCTCGAGGCTCAAACTGAGACTGGTAATCCCTTCATGCTTTACAA 435 Query 364179 AGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACC 364237 || | ||||||||||| ||||||| || | || || || | || |||| | ||| Sbjct 434 GGACGCTTGCAACCGCAA-AGCAACCAGAAGAATCTCGGCACTA-TCCGCAGTTCGAACT 377 Query 364238 TATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGT 364297 |||| || |||||| |||| |||||||| || || ||| ||| || |||||| | || | Sbjct 376 TATGCACTGAGATTGTTGAGTACACCGCCCCAGATGAGGTTGCTGTCTGTAACTTGGCCT 317 Query 364298 C 364298 | Sbjct 316 C 316 >seq117378 Length=621 Score = 114 bits (126), Expect = 3e-20 Identities = 267/395 (68%), Gaps = 6/395 (2%) Strand=Plus/Minus Query 364434 TAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGAT 364493 ||| ||||| || || || || ||| ||||||| ||||| || || || | || || Sbjct 400 TAACATGCGACACCGACCTATCGGTGTTGGTGTCCAGGGTCTTGCCGATGCGTTCCTGGC 341 Query 364494 GCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAAC 364553 || ||| | || || || || || ||||||| || || ||| | |||||||| || Sbjct 340 TCTGCGCATGCCGTTCGAGTCTCCCGAAGCTCGTGAGCTCAACAAGCAAATCTTTGAGAC 281 Query 364554 AATGTATTTTGCCGCAATGACTGCTTCGTGT-GATTTGGCAAAAACCAAGGGAAAGTACT 364612 || || || || ||||||| || ||| || ||||| || ||||| |||| Sbjct 280 CATCTACCACGCTGCTCTGACTGCCTC-TGTCGAGTTGGCCAAGGAGCAGGGACCTTACT 222 Query 364613 CTACTTATGAGGGGTC-CCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTC 364671 | || | |||| || ||| | | || |||| | ||||||| || | |||||||| Sbjct 221 CCACCTTCAAGGGCTCTCCCGCCTCCG-AGGGTATTCTCCAGTTCGACATGTGGAATGTT 163 Query 364672 ACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACT 364731 | ||| || | ||| | |||||||| || | | | | | | |||| || | | Sbjct 162 AAGCCTTCCGATTTGTGGGAGTGGGATACTCTCAGAGCGGAGATCAGGGAGCACGGCATT 103 Query 364732 CGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAAC 364791 |||||||| | | || ||||||||||| || || ||| ||||||| || || ||| Sbjct 102 CGCAACTCTTTGCTGCTCGC-CCCATGCCCACTGCCTCGACT-CACAGATTCTGGGCAAC 45 Query 364792 AACGAGTGCTTCGAACCGTTTACAAGCAATCTTTA 364826 |||||||||||||| || | ||| ||| |||| Sbjct 44 AACGAGTGCTTCGAGCCCTACACATCCAACATTTA 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1301177691894600