Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_008208.1 Length=161475 Score E Sequences producing significant alignments: (Bits) Value seq33499 154 2e-32 >seq33499 Length=26748 Score = 154 bits (170), Expect = 2e-32 Identities = 258/364 (71%), Gaps = 8/364 (2%) Strand=Plus/Minus Query 50759 ACGGTCTGCGGCACACCACCTTGGTATTTGTTGGCGCGAATCATTTCGACTTCCAGCTGG 50818 || || || || ||||||||||||||||| | || || ||||||| ||||| || || Sbjct 24048 ACTGTTTGTGGTACACCACCTTGGTATTTCTCAGCACGTTTCATTTCAACTTCGAGTTGT 23989 Query 50819 CGCCATTTGATCATTTCAGGAGTAATGGTTTTCTGCAGCAGAGTGTTAGCTTCGGCTTCT 50878 ||| ||||| || ||||| || |||||||||| || | |||||||||| |||||| Sbjct 23988 TTCCAACGAATCATCTCTGGAGTGATTGTTTTCTGCAACACACTGTTAGCTTCAGCTTCT 23929 Query 50879 TTACCAGCGGCGTACAGTTTAGCATCAGCGTCACGTTCGTTAGCAACAGCGTTTTGTTCA 50938 || ||| || || | ||||||||| || || |||||||| || || | | | | Sbjct 23928 TTTTGAGCAGCATATAATTTAGCATCTGCATCTCGTTCGTTTGCCTGGGCTTCATTATTA 23869 Query 50939 CGAGCTTCACGTGCAGCTTCGGCGGTCTTAACCTGCT-GTTGTGCCACTTTTTCGGCTTT 50997 || ||||| || |||| || || ||||||| |||| | |||| |||| | || Sbjct 23868 CGGGCTTCTCGATCAGCCTCTGCCTTCTTAAC-TGCTTGCTGTGTTTCTTTAGCTACTCG 23810 Query 50998 ATCCAGATCCGCTTGGGCTTGGTTTACGGCTTCTTCACGAAT-TTTG-GTTTGCTCAACC 51055 |||||||| || || ||| ||| || |||||||||||| |||| |||| | ||| Sbjct 23809 GTCCAGATCAGCCTGTGCTGCGTTAACCTGTTCTTCACGAATCTTTGTATTTGTT--ACC 23752 Query 51056 TG-GTCTTGAATCAGCTTCGGCAGAGTAATTTCTTGCAGGAATACTTCGGTTACTTCATA 51114 || || || || | | |||| || || ||||||| ||| | ||| |||| ||| Sbjct 23751 TGCTTCATG-ATTACATCAGGCAAGGTGATATCTTGCAAGAAGATTTCTTTTACAGTATA 23693 Query 51115 ACCA 51118 |||| Sbjct 23692 ACCA 23689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515750600780000